| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83718598
Identifier: 83718598
GI number: 83718598
Start: 3061873
End: 3062376
Strand: Reverse
Name: 83718598
Synonym: BTH_I2681
Alternate gene names: NA
Gene position: 3062376-3061873 (Counterclockwise)
Preceding gene: 83720162
Following gene: 83719613
Centisome position: 80.39
GC content: 68.06
Gene sequence:
>504_bases ATGCTGTTTTTCGCGACTGTCTCGGCCGGGCAGTTGACCGGCGCTATGCAGGTGAATTTGCAGGTCAGCCGCGGTTGCGA GGTCGCGGGCGTCGCCGAAGGCGTGGATCTGGGCCGGCTGGATTTCGGCACGCAAGGGCCGCTCTGGTCCGACTACCTGA CGGCCGACGGCCGAGCGACGTCCGGCGGCGCGGTGCGCGTCGTCTGCAGTCCGGACGTCAACGGCTTCCTGGTCTCGATC GACAGCGGTCGCAACGGGGATCAGTCGACCCGCTATCTGGTCAAGCGCGCCGCGGACGGGCGCGTCGCCGGCCGGATTCC GTACAACGTGTACCGCGATGCGGCGCGCAGCGTGCCATACGTGCCGCTCATGCCGCAGTCGTTCGTCGTCGACGGGCGGC GGGACGACGTGACGCTGCCGCTTTACGGCATCGTCAACGGCATGACGCGCGCGGTGCCCTCCGGAACCTACGAGGATTTG CTCGGGATCACGCTCGACTGGTGA
Upstream 100 bases:
>100_bases GCGATTGGGCCATCGAAAAACAACAACGAGATCACCGGGCGATCGTGTGGAGAGCGAAATGCGCAAGCATGTGGTGCGGA TGGTGGGCGGGGCGGCTTTC
Downstream 100 bases:
>100_bases TCCGGGCAGGTAAGCAGCAACCGATCTTTTTCACCACACGGAAGGAAACAACATGAAGGCTCACTGGAAAGTCTGGGCGG CTCTCGCCTGCGTGTCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Type I Pilus Protein CsuA/B; CsuA/B; Spore Coat U; Type 1 Pili Subunit CsuA/B Protein
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MLFFATVSAGQLTGAMQVNLQVSRGCEVAGVAEGVDLGRLDFGTQGPLWSDYLTADGRATSGGAVRVVCSPDVNGFLVSI DSGRNGDQSTRYLVKRAADGRVAGRIPYNVYRDAARSVPYVPLMPQSFVVDGRRDDVTLPLYGIVNGMTRAVPSGTYEDL LGITLDW
Sequences:
>Translated_167_residues MLFFATVSAGQLTGAMQVNLQVSRGCEVAGVAEGVDLGRLDFGTQGPLWSDYLTADGRATSGGAVRVVCSPDVNGFLVSI DSGRNGDQSTRYLVKRAADGRVAGRIPYNVYRDAARSVPYVPLMPQSFVVDGRRDDVTLPLYGIVNGMTRAVPSGTYEDL LGITLDW >Mature_167_residues MLFFATVSAGQLTGAMQVNLQVSRGCEVAGVAEGVDLGRLDFGTQGPLWSDYLTADGRATSGGAVRVVCSPDVNGFLVSI DSGRNGDQSTRYLVKRAADGRVAGRIPYNVYRDAARSVPYVPLMPQSFVVDGRRDDVTLPLYGIVNGMTRAVPSGTYEDL LGITLDW
Specific function: Unknown
COG id: COG5430
COG function: function code S; Uncharacterized secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17823; Mature: 17823
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFFATVSAGQLTGAMQVNLQVSRGCEVAGVAEGVDLGRLDFGTQGPLWSDYLTADGRAT CEEEEEECCCCEEEEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCC SGGAVRVVCSPDVNGFLVSIDSGRNGDQSTRYLVKRAADGRVAGRIPYNVYRDAARSVPY CCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCC VPLMPQSFVVDGRRDDVTLPLYGIVNGMTRAVPSGTYEDLLGITLDW CCCCCCCEEECCCCCCEEEEHHHHHHHHHHHCCCCCCHHHEEEEECC >Mature Secondary Structure MLFFATVSAGQLTGAMQVNLQVSRGCEVAGVAEGVDLGRLDFGTQGPLWSDYLTADGRAT CEEEEEECCCCEEEEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCC SGGAVRVVCSPDVNGFLVSIDSGRNGDQSTRYLVKRAADGRVAGRIPYNVYRDAARSVPY CCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCC VPLMPQSFVVDGRRDDVTLPLYGIVNGMTRAVPSGTYEDLLGITLDW CCCCCCCEEECCCCCCEEEEHHHHHHHHHHHCCCCCCHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA