| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
Click here to switch to the map view.
The map label for this gene is icc [H]
Identifier: 83718557
GI number: 83718557
Start: 3252289
End: 3253113
Strand: Direct
Name: icc [H]
Synonym: BTH_I2835
Alternate gene names: 83718557
Gene position: 3252289-3253113 (Clockwise)
Preceding gene: 83721129
Following gene: 83719264
Centisome position: 85.38
GC content: 71.03
Gene sequence:
>825_bases ATGCTGCTTGCCCACATCAGCGATCTGCACATCAAGCGGCCGGGCGCGCTCGCATACCGGCGCGTCGACACGGCCGCGCA TCTCGCGCGCTGCGTCGCGCGGCTGAACGCGCTCGAGCCGCGCCCGGACGCGGTGCTCGTCACGGGCGACCTGACCGATT TCGGCGACGACGAAGAATACGCGCATCTGAAATCGCTGCTCGCGCCGCTCGCGATGCCGTACTACCTGATCGTCGGCAAC CACGACGATCGCGCGGCGCTGCGGCGCGCGTTCCCCGCGCGCGCGGAATTGCAGTCGGGCGAGTTCGTTCAGTACGCGCT CGATCTGGGGCCGTTGCGCGTGATCGCGCTCGATTCGCAGATTCCGGGCGCGAGCGGCGGCACGCTGTGCGACGCGCGGC TCGCGTGGCTCGCCGGCCAGCTCGACGCCGCACGCGATCGCCCCGTGATCGTCGCGCTCCACCATCCGCCGTTCGCGTGC GGCATCGGCCACATGGATGCGATGCGGCTCGCCCCGCACGCGTCGAGCCGGCTCGATGCGCTGCTGCGCCGCTTTCCGAA CGTCGAGCGCGTGCTGTGCGGGCACGTGCATCGAACGATGTTCGCGCGCTTCGGCGGCACGGTCGCATCGGCCGTGCCCG CGCCCGCGCATCAGGTCACGTTCGATCTGCGCGACGACGGGCCGTCGTCGTTCTCGATGGAGCCGCCCGCGTTCGCCGTG CATCGCTATGCGCCGGACGCCGGGCTCGCGTCGCATCACGTGTACGTCGACGCGAGCGACGGGCCGCATCCGTTCTTCGA GCCGACGGGCGCGCTGATCGACTGA
Upstream 100 bases:
>100_bases GCGCCGTGCGCCGTGCGGCGCATGATGCGCGAAGCGCGGCACCGGCGACACAAGACACGAATACGACACGAACCCCATAC GATTACAACGAGGAACGACG
Downstream 100 bases:
>100_bases TCGACTGATCGAGCGGGCGCTCGGACGGCCGGGCAGTTGGACGGCCGCGAGACGCCGCGGCACGCCTCAAGCGTGCCGCG GTATGCGCGAGTCGCGCGGT
Product: Ser/Thr protein phosphatase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MLLAHISDLHIKRPGALAYRRVDTAAHLARCVARLNALEPRPDAVLVTGDLTDFGDDEEYAHLKSLLAPLAMPYYLIVGN HDDRAALRRAFPARAELQSGEFVQYALDLGPLRVIALDSQIPGASGGTLCDARLAWLAGQLDAARDRPVIVALHHPPFAC GIGHMDAMRLAPHASSRLDALLRRFPNVERVLCGHVHRTMFARFGGTVASAVPAPAHQVTFDLRDDGPSSFSMEPPAFAV HRYAPDAGLASHHVYVDASDGPHPFFEPTGALID
Sequences:
>Translated_274_residues MLLAHISDLHIKRPGALAYRRVDTAAHLARCVARLNALEPRPDAVLVTGDLTDFGDDEEYAHLKSLLAPLAMPYYLIVGN HDDRAALRRAFPARAELQSGEFVQYALDLGPLRVIALDSQIPGASGGTLCDARLAWLAGQLDAARDRPVIVALHHPPFAC GIGHMDAMRLAPHASSRLDALLRRFPNVERVLCGHVHRTMFARFGGTVASAVPAPAHQVTFDLRDDGPSSFSMEPPAFAV HRYAPDAGLASHHVYVDASDGPHPFFEPTGALID >Mature_274_residues MLLAHISDLHIKRPGALAYRRVDTAAHLARCVARLNALEPRPDAVLVTGDLTDFGDDEEYAHLKSLLAPLAMPYYLIVGN HDDRAALRRAFPARAELQSGEFVQYALDLGPLRVIALDSQIPGASGGTLCDARLAWLAGQLDAARDRPVIVALHHPPFAC GIGHMDAMRLAPHASSRLDALLRRFPNVERVLCGHVHRTMFARFGGTVASAVPAPAHQVTFDLRDDGPSSFSMEPPAFAV HRYAPDAGLASHHVYVDASDGPHPFFEPTGALID
Specific function: Affects The Expression Of The Lacz Gene. [C]
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli icc [H]
Homologues:
Organism=Escherichia coli, GI1789410, Length=271, Percent_Identity=26.1992619926199, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013622 - InterPro: IPR004843 - ProDom: PD587589 [H]
Pfam domain/function: PF00149 Metallophos; PF08413 Metallophos_C [H]
EC number: NA
Molecular weight: Translated: 29660; Mature: 29660
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLAHISDLHIKRPGALAYRRVDTAAHLARCVARLNALEPRPDAVLVTGDLTDFGDDEEY CEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHH AHLKSLLAPLAMPYYLIVGNHDDRAALRRAFPARAELQSGEFVQYALDLGPLRVIALDSQ HHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCHHHCCCCCEEEEEECCCCEEEEEECCC IPGASGGTLCDARLAWLAGQLDAARDRPVIVALHHPPFACGIGHMDAMRLAPHASSRLDA CCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCEECCCCHHHHHHCCCCHHHHHH LLRRFPNVERVLCGHVHRTMFARFGGTVASAVPAPAHQVTFDLRDDGPSSFSMEPPAFAV HHHHCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEE HRYAPDAGLASHHVYVDASDGPHPFFEPTGALID EEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MLLAHISDLHIKRPGALAYRRVDTAAHLARCVARLNALEPRPDAVLVTGDLTDFGDDEEY CEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHH AHLKSLLAPLAMPYYLIVGNHDDRAALRRAFPARAELQSGEFVQYALDLGPLRVIALDSQ HHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCHHHCCCCCEEEEEECCCCEEEEEECCC IPGASGGTLCDARLAWLAGQLDAARDRPVIVALHHPPFACGIGHMDAMRLAPHASSRLDA CCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCEECCCCHHHHHHCCCCHHHHHH LLRRFPNVERVLCGHVHRTMFARFGGTVASAVPAPAHQVTFDLRDDGPSSFSMEPPAFAV HHHHCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEE HRYAPDAGLASHHVYVDASDGPHPFFEPTGALID EEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]