| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83718547
Identifier: 83718547
GI number: 83718547
Start: 1100605
End: 1102602
Strand: Reverse
Name: 83718547
Synonym: BTH_I0974
Alternate gene names: NA
Gene position: 1102602-1100605 (Counterclockwise)
Preceding gene: 83721037
Following gene: 83719691
Centisome position: 28.95
GC content: 69.77
Gene sequence:
>1998_bases TTGCATCGATCTGTCTCAAGTGATGTGATGTTGCGAAGCGCGGGCCGCCCTGACGCCCGCGTCGCGCCGTCCGCCGAGTA TACGGGCCCGTGCTTGCCGCCGTACAGCGCGGCGCGCAAGTGCCCAGATCGTGAAACGACAAGGATTGCTGGAGGATCGC CGCCCATGCCCGCCCTCATCGAAGACTACGCCCTCGTCGGCGACGGCCACACGGCCGCGCTGATCTCCCGCGACGGCTCG GTCGACTGGCTGTGCTGGCCCCGTTTCGATTCCGGCGCGTGCTTCGCGGCGCTCGTCGGCACCCCGGAGAACGGCCGCTG GCTCGTCGCGCCCGCCGACGACGTGCGCGTGAGCGCGACGTCGCGCCGCTACCGCGGCGACACGCTGATCCTCGAAACCG ACTACGAGAGCGACGAAGGCGCCGTCACCGTGATCGATTTCATGCCGCCGGGCAGCGGCTGGTCGGAGCTCGTGCGGATC GTCGTCGGCCGGCGCGGCGAGATGAAGATGCAGATGCAGCTCGTGTTGCGTTTCGACTATGGCTTCTCGGTGCCGTGGGT CACGCGGCTGCCGCGCGAGGCGGGCGTGAAGGCGATCGCCGGCCCGGACACGGTCGTGCTGCGCACGCCCGTGCAGCTGT CGGGCGAGAACCTGCATACGGTGGCCGAATTCACGGTGAAGGCGCAGGAGCGCGTGCCGTTCTCGCTGTCCTACGCACCG TCGCACCTGAGGCTGCCGCCCGCGCGCGAGCCGCTGTCGATGCTCGCGCGCACCGAAAACTACTGGCTCGAATGGTCGGC GCGGTGCCCGGTGCGCGGCCGCTACGCGGCCGCCGTGCGCCGCTCGCTGATCACGCTGAAGGCGCTCGCGTACGAGCCGA CGGGCGGCATCGTCGCCGCGCCGACGACGTCGCTGCCCGAGCAGTTGGGCGGCACCCGCAACTGGGACTACCGCTACTGC TGGCTGCGCGACGCGACGATCACGCTGCTCGCATTGATGCGCGGCGGCTACTACGACGAGGCGCGCGCGTGGCGCGCGTG GCTCGGCCGCGTGATGGCCGGCTCGCCGGAGCAGATCCAGATCATGTACGGAATCGCCGGCGAGCGGCGCCTGCCCGAAA TGGAGCTCGACTGGCTGCCGGGCTATCACGATTCGCGCCCGGTGCGCATCGGCAACAACGCGGCCAACCAGTTGCAGCTC GACGTGTTCGGCGAAGTGATGTCCGCGCTGCATGTCGCGCGCGTCGGCGGCCTGCAGGCGGACGACACGGTCTGGTCGGT CCAGACGACGCTGCTCGCGCACCTCGAGAAGATCTGGCGCGAGCCGGACGAAGGCATCTGGGAAACGCGCGGCGGCCGCC GGCATTTCACGTTCTCGAAGGTGATGGCGTGGGTCGCGTTCGAGCGCGCGATCAAGTCGGCCGAGATGTTCCGGCTGCCC GCGCCGCTCGAGCGCTGGCGCGCGGTGCGCGACGAGATCCACGCGGACGTCTGCGCGAACGGGTGGAATCCGCGCATGCG CGCGTTCACGCAAAGCTACGGCAGCGACGCGCTCGACGCGAGCGTGCTGATGCTGCCGCTCGTCGGCTTCCTGCCGCCCA CCGATTCGCGCATCGCGGACACGGTCGACGCGATCGAGCGCAACCTGATGCACGACGGCCTCGTGCTGCGCTACCACACG TCCGAATACGACGACGGCCTGCCGCCCGGCGAAGGCACGTTTCTCGCGTGCAGCTTCTGGCTCGTCGACAATCTCGCGCT CCTCGGCCGCATCGACGACGCGCACGCGCTCTTTCGCCGCCTGCTGTCGCTCACGAACGACCTCGGCCTGCTCGCCGAGG AATACGATCCCGCGGCGCGCCGCCAGGTAGGGAATTTCCCTCAGGCGTTCTCGCACGTCGGGCTCGTGCACACGGCGTTC AACCTGATGCATCACGAAGAGGAAATGCTGCGCGCGGCCGGCCAGCCTACGGCGGCGGACGCGGTCGCCGGACGCTAG
Upstream 100 bases:
>100_bases AAGCGGCAGCGCGAGCGCGAAACCTTTCATCCAGTGGCTCAACCTAAGCGGGAAAGCGAACGACGAAGGCGCGTGAGCGC GTCGGGTCATCGGAACCTCC
Downstream 100 bases:
>100_bases GGCCGGTGCACGTTTGCGCGACAAACGTAAGACAAGGTCAGATGTCGAGGCAACGCTCGGAAATGCGGGTATGCTGCGTT GCGACACCCCCGAATGTCCG
Product: glycosyl hydrolase family protein
Products: NA
Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Trehalose-Phosphatase; Glucoamylase; Glycoside Hydrolase Family Protein; Trehalose-Phosphatase/Glycoside Hydrolase; Glucoamylase-Like Glycosyl Hydrolase; Trehalose Phosphatase; Glycosyl Hydrolase Glucoamylase; Glucoamylase Or Related Glycosyl Hydrolase; Six-Hairpin Glycosidase-Like Protein; Trehalose 6-Phosphatase; Trehalose-Phosphatase/ Glycoside Hydrolase; Glucoamylase Or Related Glycosyl Hydrolase Protein; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Protein; Trehalose-6-Phosphate Phophatase
Number of amino acids: Translated: 665; Mature: 665
Protein sequence:
>665_residues MHRSVSSDVMLRSAGRPDARVAPSAEYTGPCLPPYSAARKCPDRETTRIAGGSPPMPALIEDYALVGDGHTAALISRDGS VDWLCWPRFDSGACFAALVGTPENGRWLVAPADDVRVSATSRRYRGDTLILETDYESDEGAVTVIDFMPPGSGWSELVRI VVGRRGEMKMQMQLVLRFDYGFSVPWVTRLPREAGVKAIAGPDTVVLRTPVQLSGENLHTVAEFTVKAQERVPFSLSYAP SHLRLPPAREPLSMLARTENYWLEWSARCPVRGRYAAAVRRSLITLKALAYEPTGGIVAAPTTSLPEQLGGTRNWDYRYC WLRDATITLLALMRGGYYDEARAWRAWLGRVMAGSPEQIQIMYGIAGERRLPEMELDWLPGYHDSRPVRIGNNAANQLQL DVFGEVMSALHVARVGGLQADDTVWSVQTTLLAHLEKIWREPDEGIWETRGGRRHFTFSKVMAWVAFERAIKSAEMFRLP APLERWRAVRDEIHADVCANGWNPRMRAFTQSYGSDALDASVLMLPLVGFLPPTDSRIADTVDAIERNLMHDGLVLRYHT SEYDDGLPPGEGTFLACSFWLVDNLALLGRIDDAHALFRRLLSLTNDLGLLAEEYDPAARRQVGNFPQAFSHVGLVHTAF NLMHHEEEMLRAAGQPTAADAVAGR
Sequences:
>Translated_665_residues MHRSVSSDVMLRSAGRPDARVAPSAEYTGPCLPPYSAARKCPDRETTRIAGGSPPMPALIEDYALVGDGHTAALISRDGS VDWLCWPRFDSGACFAALVGTPENGRWLVAPADDVRVSATSRRYRGDTLILETDYESDEGAVTVIDFMPPGSGWSELVRI VVGRRGEMKMQMQLVLRFDYGFSVPWVTRLPREAGVKAIAGPDTVVLRTPVQLSGENLHTVAEFTVKAQERVPFSLSYAP SHLRLPPAREPLSMLARTENYWLEWSARCPVRGRYAAAVRRSLITLKALAYEPTGGIVAAPTTSLPEQLGGTRNWDYRYC WLRDATITLLALMRGGYYDEARAWRAWLGRVMAGSPEQIQIMYGIAGERRLPEMELDWLPGYHDSRPVRIGNNAANQLQL DVFGEVMSALHVARVGGLQADDTVWSVQTTLLAHLEKIWREPDEGIWETRGGRRHFTFSKVMAWVAFERAIKSAEMFRLP APLERWRAVRDEIHADVCANGWNPRMRAFTQSYGSDALDASVLMLPLVGFLPPTDSRIADTVDAIERNLMHDGLVLRYHT SEYDDGLPPGEGTFLACSFWLVDNLALLGRIDDAHALFRRLLSLTNDLGLLAEEYDPAARRQVGNFPQAFSHVGLVHTAF NLMHHEEEMLRAAGQPTAADAVAGR >Mature_665_residues MHRSVSSDVMLRSAGRPDARVAPSAEYTGPCLPPYSAARKCPDRETTRIAGGSPPMPALIEDYALVGDGHTAALISRDGS VDWLCWPRFDSGACFAALVGTPENGRWLVAPADDVRVSATSRRYRGDTLILETDYESDEGAVTVIDFMPPGSGWSELVRI VVGRRGEMKMQMQLVLRFDYGFSVPWVTRLPREAGVKAIAGPDTVVLRTPVQLSGENLHTVAEFTVKAQERVPFSLSYAP SHLRLPPAREPLSMLARTENYWLEWSARCPVRGRYAAAVRRSLITLKALAYEPTGGIVAAPTTSLPEQLGGTRNWDYRYC WLRDATITLLALMRGGYYDEARAWRAWLGRVMAGSPEQIQIMYGIAGERRLPEMELDWLPGYHDSRPVRIGNNAANQLQL DVFGEVMSALHVARVGGLQADDTVWSVQTTLLAHLEKIWREPDEGIWETRGGRRHFTFSKVMAWVAFERAIKSAEMFRLP APLERWRAVRDEIHADVCANGWNPRMRAFTQSYGSDALDASVLMLPLVGFLPPTDSRIADTVDAIERNLMHDGLVLRYHT SEYDDGLPPGEGTFLACSFWLVDNLALLGRIDDAHALFRRLLSLTNDLGLLAEEYDPAARRQVGNFPQAFSHVGLVHTAF NLMHHEEEMLRAAGQPTAADAVAGR
Specific function: Unknown
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73939; Mature: 73939
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRSVSSDVMLRSAGRPDARVAPSAEYTGPCLPPYSAARKCPDRETTRIAGGSPPMPALI CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCCHHH EDYALVGDGHTAALISRDGSVDWLCWPRFDSGACFAALVGTPENGRWLVAPADDVRVSAT HCCEEECCCCEEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEC SRRYRGDTLILETDYESDEGAVTVIDFMPPGSGWSELVRIVVGRRGEMKMQMQLVLRFDY CCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEEEEECC GFSVPWVTRLPREAGVKAIAGPDTVVLRTPVQLSGENLHTVAEFTVKAQERVPFSLSYAP CCCCCHHHHCCHHHCCEEECCCCEEEEECCCEECCCCEEEHHHHHEEHHHCCCEEEEECC SHLRLPPAREPLSMLARTENYWLEWSARCPVRGRYAAAVRRSLITLKALAYEPTGGIVAA CCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHEEECCCCCEEEC PTTSLPEQLGGTRNWDYRYCWLRDATITLLALMRGGYYDEARAWRAWLGRVMAGSPEQIQ CCCCCHHHHCCCCCCCEEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEE IMYGIAGERRLPEMELDWLPGYHDSRPVRIGNNAANQLQLDVFGEVMSALHVARVGGLQA EEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEHHHHHHHHHHHHHHHHCCCCC DDTVWSVQTTLLAHLEKIWREPDEGIWETRGGRRHFTFSKVMAWVAFERAIKSAEMFRLP CCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHEECC APLERWRAVRDEIHADVCANGWNPRMRAFTQSYGSDALDASVLMLPLVGFLPPTDSRIAD CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHH TVDAIERNLMHDGLVLRYHTSEYDDGLPPGEGTFLACSFWLVDNLALLGRIDDAHALFRR HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHCHHHHCCCCHHHHHHHH LLSLTNDLGLLAEEYDPAARRQVGNFPQAFSHVGLVHTAFNLMHHEEEMLRAAGQPTAAD HHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH AVAGR HCCCC >Mature Secondary Structure MHRSVSSDVMLRSAGRPDARVAPSAEYTGPCLPPYSAARKCPDRETTRIAGGSPPMPALI CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCCHHH EDYALVGDGHTAALISRDGSVDWLCWPRFDSGACFAALVGTPENGRWLVAPADDVRVSAT HCCEEECCCCEEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEC SRRYRGDTLILETDYESDEGAVTVIDFMPPGSGWSELVRIVVGRRGEMKMQMQLVLRFDY CCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEEEEECC GFSVPWVTRLPREAGVKAIAGPDTVVLRTPVQLSGENLHTVAEFTVKAQERVPFSLSYAP CCCCCHHHHCCHHHCCEEECCCCEEEEECCCEECCCCEEEHHHHHEEHHHCCCEEEEECC SHLRLPPAREPLSMLARTENYWLEWSARCPVRGRYAAAVRRSLITLKALAYEPTGGIVAA CCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHEEECCCCCEEEC PTTSLPEQLGGTRNWDYRYCWLRDATITLLALMRGGYYDEARAWRAWLGRVMAGSPEQIQ CCCCCHHHHCCCCCCCEEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEE IMYGIAGERRLPEMELDWLPGYHDSRPVRIGNNAANQLQLDVFGEVMSALHVARVGGLQA EEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEHHHHHHHHHHHHHHHHCCCCC DDTVWSVQTTLLAHLEKIWREPDEGIWETRGGRRHFTFSKVMAWVAFERAIKSAEMFRLP CCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHEECC APLERWRAVRDEIHADVCANGWNPRMRAFTQSYGSDALDASVLMLPLVGFLPPTDSRIAD CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHH TVDAIERNLMHDGLVLRYHTSEYDDGLPPGEGTFLACSFWLVDNLALLGRIDDAHALFRR HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHCHHHHCCCCHHHHHHHH LLSLTNDLGLLAEEYDPAARRQVGNFPQAFSHVGLVHTAFNLMHHEEEMLRAAGQPTAAD HHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH AVAGR HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA