Click here to switch to the map view.

The map label for this gene is ucpA [C]

Identifier: 83718542

GI number: 83718542

Start: 391838

End: 392617

Strand: Reverse

Name: ucpA [C]

Synonym: BTH_I0352

Alternate gene names: 83718542

Gene position: 392617-391838 (Counterclockwise)

Preceding gene: 83721349

Following gene: 83720267

Centisome position: 10.31

GC content: 70.51

Gene sequence:

>780_bases
ATGAACGCCCCTCCTCCGCTCAAGGTCTTCATCACCGGCGCGTCCAGCGGGCTCGGGCTCGCGCTCGCCGCCGAATATGC
GCGGCGCGGCGCGACGCTCGGCCTCGTCGCCCGGCGCGCCGACGCGCTCGCCGAGTTCGCGCAACGCTTCCCCAAGGCCA
CGATCTCGATCCACCCGGCCGACGTGCGCGACGCCGATGCGCTCGCGCTCGCCGCGTCGCGCTTCGTTGCCGCGCACGGG
TGCCCCGACGTCGTGATCGCGAACGCCGGCATCAGCAAGGGCGCGATCACGGGCGAAGGCGACCTCGACGCGTTCCGCGA
GATCATGGATGTCAACTACTACGGGATGATCGCGACGTTCGAGCCGTTCATCGCGCCGATGACGGCCGCGCGGCGCGGCA
CGCTCGTCGGCATCGCGAGCGTCGCCGGCGTGCGCGGGCTGCCGGGCTCGGGTGCGTACAGCGCGTCGAAGGCCGCGGCG
ATCAAGTATCTCGAGGCGCTGAGGGTCGAGCTGCGGCCCGCGCAGGTTGCGGTCGTGACGATCGCGCCCGGCTACATTCG
CACGCCGATGACCGAGCACAACCCGTATCCGATGCCGTTCCTGATGGATGCGGACCGCTTCGCGAAGCGCGCGGCGCTCG
CGATCTCGCAGAAAGCCGCGTTTCGCGTGATTCCGTGGCAGATGGGCGTCGTCGCGAAGCTGCTGCACGTAATGCCGCGC
TGGCTGTACGATCGCCTGTTCGAGAAGGCGCCCCGCAAGCCCAGGGCGAAGGCGGGCTGA

Upstream 100 bases:

>100_bases
CCGGCCTACACGAACAGCCTCGAAGGCACCGCGCAAGTGCTCGACTTCCTCGTCAAGCAAGTGCAGGACAAGAAGCTGTA
ATCTCGCCCCGCGCACCGGC

Downstream 100 bases:

>100_bases
GCCGGCCGGCGCGCGGCGTTCATCGACCCGTCACGCGCCCATCGGCGGCTGCGTGTAGACGGCCGGGTCGGCCGACAACC
CCGCCTTGACGGCGCGCGTC

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MNAPPPLKVFITGASSGLGLALAAEYARRGATLGLVARRADALAEFAQRFPKATISIHPADVRDADALALAASRFVAAHG
CPDVVIANAGISKGAITGEGDLDAFREIMDVNYYGMIATFEPFIAPMTAARRGTLVGIASVAGVRGLPGSGAYSASKAAA
IKYLEALRVELRPAQVAVVTIAPGYIRTPMTEHNPYPMPFLMDADRFAKRAALAISQKAAFRVIPWQMGVVAKLLHVMPR
WLYDRLFEKAPRKPRAKAG

Sequences:

>Translated_259_residues
MNAPPPLKVFITGASSGLGLALAAEYARRGATLGLVARRADALAEFAQRFPKATISIHPADVRDADALALAASRFVAAHG
CPDVVIANAGISKGAITGEGDLDAFREIMDVNYYGMIATFEPFIAPMTAARRGTLVGIASVAGVRGLPGSGAYSASKAAA
IKYLEALRVELRPAQVAVVTIAPGYIRTPMTEHNPYPMPFLMDADRFAKRAALAISQKAAFRVIPWQMGVVAKLLHVMPR
WLYDRLFEKAPRKPRAKAG
>Mature_259_residues
MNAPPPLKVFITGASSGLGLALAAEYARRGATLGLVARRADALAEFAQRFPKATISIHPADVRDADALALAASRFVAAHG
CPDVVIANAGISKGAITGEGDLDAFREIMDVNYYGMIATFEPFIAPMTAARRGTLVGIASVAGVRGLPGSGAYSASKAAA
IKYLEALRVELRPAQVAVVTIAPGYIRTPMTEHNPYPMPFLMDADRFAKRAALAISQKAAFRVIPWQMGVVAKLLHVMPR
WLYDRLFEKAPRKPRAKAG

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI20149619, Length=191, Percent_Identity=31.9371727748691, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI7706318, Length=193, Percent_Identity=28.4974093264249, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI157739938, Length=196, Percent_Identity=29.5918367346939, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI40807363, Length=255, Percent_Identity=29.8039215686275, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI4503817, Length=199, Percent_Identity=30.1507537688442, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI31543615, Length=226, Percent_Identity=25.2212389380531, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI223718074, Length=198, Percent_Identity=32.8282828282828, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI310128830, Length=237, Percent_Identity=29.1139240506329, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI310115468, Length=237, Percent_Identity=29.1139240506329, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI4758504, Length=205, Percent_Identity=32.6829268292683, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI7657478, Length=191, Percent_Identity=28.2722513089005, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI87082100, Length=188, Percent_Identity=34.5744680851064, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1786701, Length=186, Percent_Identity=29.5698924731183, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787335, Length=185, Percent_Identity=27.5675675675676, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787820, Length=179, Percent_Identity=24.5810055865922, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17508895, Length=243, Percent_Identity=27.5720164609054, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI71997402, Length=187, Percent_Identity=31.5508021390374, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17567345, Length=227, Percent_Identity=28.6343612334802, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17570069, Length=186, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI32563809, Length=191, Percent_Identity=29.3193717277487, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17507613, Length=191, Percent_Identity=29.3193717277487, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17555706, Length=203, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17564282, Length=192, Percent_Identity=31.25, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI25147288, Length=189, Percent_Identity=27.5132275132275, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI193203117, Length=202, Percent_Identity=28.7128712871287, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI193203115, Length=202, Percent_Identity=28.7128712871287, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71994604, Length=186, Percent_Identity=27.4193548387097, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17562904, Length=201, Percent_Identity=26.865671641791, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71994600, Length=187, Percent_Identity=28.3422459893048, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=191, Percent_Identity=30.3664921465969, Blast_Score=80, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6322067, Length=200, Percent_Identity=29.5, Blast_Score=79, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21358495, Length=196, Percent_Identity=32.6530612244898, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI23397609, Length=231, Percent_Identity=31.6017316017316, Blast_Score=97, Evalue=8e-21,
Organism=Drosophila melanogaster, GI21357041, Length=188, Percent_Identity=30.3191489361702, Blast_Score=88, Evalue=6e-18,
Organism=Drosophila melanogaster, GI281364892, Length=212, Percent_Identity=28.3018867924528, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI21355631, Length=204, Percent_Identity=29.9019607843137, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28571526, Length=205, Percent_Identity=28.780487804878, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24644339, Length=211, Percent_Identity=30.3317535545024, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24649181, Length=252, Percent_Identity=25.7936507936508, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24580925, Length=194, Percent_Identity=29.3814432989691, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21356301, Length=198, Percent_Identity=29.2929292929293, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI116007236, Length=208, Percent_Identity=27.4038461538462, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24640442, Length=191, Percent_Identity=27.7486910994764, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24581726, Length=201, Percent_Identity=26.3681592039801, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27586; Mature: 27586

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPPPLKVFITGASSGLGLALAAEYARRGATLGLVARRADALAEFAQRFPKATISIHPA
CCCCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCC
DVRDADALALAASRFVAAHGCPDVVIANAGISKGAITGEGDLDAFREIMDVNYYGMIATF
CCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEH
EPFIAPMTAARRGTLVGIASVAGVRGLPGSGAYSASKAAAIKYLEALRVELRPAQVAVVT
HHHHHHHHHHHCCCEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE
IAPGYIRTPMTEHNPYPMPFLMDADRFAKRAALAISQKAAFRVIPWQMGVVAKLLHVMPR
ECCCHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHH
WLYDRLFEKAPRKPRAKAG
HHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNAPPPLKVFITGASSGLGLALAAEYARRGATLGLVARRADALAEFAQRFPKATISIHPA
CCCCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCC
DVRDADALALAASRFVAAHGCPDVVIANAGISKGAITGEGDLDAFREIMDVNYYGMIATF
CCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEH
EPFIAPMTAARRGTLVGIASVAGVRGLPGSGAYSASKAAAIKYLEALRVELRPAQVAVVT
HHHHHHHHHHHCCCEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE
IAPGYIRTPMTEHNPYPMPFLMDADRFAKRAALAISQKAAFRVIPWQMGVVAKLLHVMPR
ECCCHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHH
WLYDRLFEKAPRKPRAKAG
HHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1730672 [H]