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The map label for this gene is yjcC [H]

Identifier: 83718540

GI number: 83718540

Start: 861981

End: 863255

Strand: Reverse

Name: yjcC [H]

Synonym: BTH_I0751

Alternate gene names: 83718540

Gene position: 863255-861981 (Counterclockwise)

Preceding gene: 83720903

Following gene: 83718901

Centisome position: 22.66

GC content: 69.65

Gene sequence:

>1275_bases
ATGAGCATGATCGACATCGATCCCCCCAGCTTCCAGTCGCCGCGCCCGATCGCGGGCGACGACGGCAACCGGCGCACCGT
GCTGTACGGCGACTACACCGTGTTCAGCGTGTTCCAGCCGGTCTTCTCGGTGTCGCATCGACGTGCGATCGGCTACCACG
CGTCGCTGCGCGCGCACGATTCGCAAGGCAACCAGGTGCCGTCGCACGACGTGTTCACGCAGGCCGCGCGCCGCGGCGAT
CTGCTCGAACTCGGCCGTCTCGCCGAATCGCTGCATCTCGGCAACTTCCACACGTTCGACAGCCATGACGAATGGCTCTT
CCTGAGCCTGCACCCCGCCGCGCTGATGGACACCGTCTACGGCGACGCGCTCCTCGCGAACCTGAAGGCGCTCGGGCTGC
CGCCGCAGCGCGTCGTGCTCGAGGTGCCCGAGCAGGCGGGCGGCGAGACGCCGCGCTTCGCGGCGATCGTCGACGGGCTG
CGCAAGGCCGGCTTCCTGATCGCGCTCGGCGGCTTCGGCGCGAAGCACTCGAACATCGATCGCGTCTGGCACCTGCATCC
GGACATCGTCACGCTCGATCGCGGAATCCTCGCGCAGGCGAGCGAGCACTCGCATCTCGAGCGCGTGCTGCCCGGCCTCG
TGTCGCTGCTGCACGAATCGGGGCAGCTCGTGCTGATGGGCGGCATCACGACCGAGCGCGAGGCGCTGATCGCGCTCGAA
TGCGACGTCGATTTCGTGCAGGGGCAGTATTTCGCCGGACCGAGCGTCGAGCCGGTGCAGCCGCAGGTCGCGGCGGGCAT
CATGGACACGCTGTCGGCCGCGCTGCGGCTGCGCGTCGCCGAGCGTTCGCGCGCGCAGGAGGCGCGTCTCGCGCCGTACG
TCGCCGCGCTGCTGCAGGCGAGCGCACTGTTGCGCGAAGGCCGCGACCTGACCGAAGCGTCGAAGGAACTGCTCGAGCTG
CCGGAGGCCGCGCGCTGCTTCCTGCTCGACGCGTCGGGCCGGCAGATCGGCGACAACGTGCTGCCGCGCGTGCGCGCATC
GCAGCGCGCGAAGCGCTTCAGTCCGCTCATGCATTCGGAAGGCGCGAGCTGGGAGCGCCGGCCATACTTCATCGAGGCGA
TGCGCGTGCCGGGGCGCGTGCATTTCACGCCGCCCTATCTGTCGATCAACGAAGCGCACCTGTGCGTGACGGCGTCGATC
GCGACGCCCGCCGCGCAGGGCATGCAGGTGCTGTGCGTCGACATCAACTGGGAAGCCGCCGCGCACCGCGACTAG

Upstream 100 bases:

>100_bases
GCGCCGCGCGCGAAGCTGCGGCGCGCCGGCGCGCCTTTTTGCGCACGGTTCTTGCTCGCCTATTCTGTAGGTAAACTGAC
GGTTCTCGGGCAGCCGAATC

Downstream 100 bases:

>100_bases
CGCGCGACGCCCGGGCGTCGAACGCCCGCCGCCCGAGCGTTCGCGCGTCCGACGCGCGTCAGCCAGCCGCAGTCGCGCGC
CTTCTCGCGACGAGCCGGTG

Product: EAL domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MSMIDIDPPSFQSPRPIAGDDGNRRTVLYGDYTVFSVFQPVFSVSHRRAIGYHASLRAHDSQGNQVPSHDVFTQAARRGD
LLELGRLAESLHLGNFHTFDSHDEWLFLSLHPAALMDTVYGDALLANLKALGLPPQRVVLEVPEQAGGETPRFAAIVDGL
RKAGFLIALGGFGAKHSNIDRVWHLHPDIVTLDRGILAQASEHSHLERVLPGLVSLLHESGQLVLMGGITTEREALIALE
CDVDFVQGQYFAGPSVEPVQPQVAAGIMDTLSAALRLRVAERSRAQEARLAPYVAALLQASALLREGRDLTEASKELLEL
PEAARCFLLDASGRQIGDNVLPRVRASQRAKRFSPLMHSEGASWERRPYFIEAMRVPGRVHFTPPYLSINEAHLCVTASI
ATPAAQGMQVLCVDINWEAAAHRD

Sequences:

>Translated_424_residues
MSMIDIDPPSFQSPRPIAGDDGNRRTVLYGDYTVFSVFQPVFSVSHRRAIGYHASLRAHDSQGNQVPSHDVFTQAARRGD
LLELGRLAESLHLGNFHTFDSHDEWLFLSLHPAALMDTVYGDALLANLKALGLPPQRVVLEVPEQAGGETPRFAAIVDGL
RKAGFLIALGGFGAKHSNIDRVWHLHPDIVTLDRGILAQASEHSHLERVLPGLVSLLHESGQLVLMGGITTEREALIALE
CDVDFVQGQYFAGPSVEPVQPQVAAGIMDTLSAALRLRVAERSRAQEARLAPYVAALLQASALLREGRDLTEASKELLEL
PEAARCFLLDASGRQIGDNVLPRVRASQRAKRFSPLMHSEGASWERRPYFIEAMRVPGRVHFTPPYLSINEAHLCVTASI
ATPAAQGMQVLCVDINWEAAAHRD
>Mature_423_residues
SMIDIDPPSFQSPRPIAGDDGNRRTVLYGDYTVFSVFQPVFSVSHRRAIGYHASLRAHDSQGNQVPSHDVFTQAARRGDL
LELGRLAESLHLGNFHTFDSHDEWLFLSLHPAALMDTVYGDALLANLKALGLPPQRVVLEVPEQAGGETPRFAAIVDGLR
KAGFLIALGGFGAKHSNIDRVWHLHPDIVTLDRGILAQASEHSHLERVLPGLVSLLHESGQLVLMGGITTEREALIALEC
DVDFVQGQYFAGPSVEPVQPQVAAGIMDTLSAALRLRVAERSRAQEARLAPYVAALLQASALLREGRDLTEASKELLELP
EAARCFLLDASGRQIGDNVLPRVRASQRAKRFSPLMHSEGASWERRPYFIEAMRVPGRVHFTPPYLSINEAHLCVTASIA
TPAAQGMQVLCVDINWEAAAHRD

Specific function: Overexpression reduces biofilm formation [H]

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI1790496, Length=240, Percent_Identity=22.0833333333333, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 46433; Mature: 46302

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMIDIDPPSFQSPRPIAGDDGNRRTVLYGDYTVFSVFQPVFSVSHRRAIGYHASLRAHD
CCEECCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCEEEEEEEEC
SQGNQVPSHDVFTQAARRGDLLELGRLAESLHLGNFHTFDSHDEWLFLSLHPAALMDTVY
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHH
GDALLANLKALGLPPQRVVLEVPEQAGGETPRFAAIVDGLRKAGFLIALGGFGAKHSNID
HHHHHHHHHHHCCCHHHHEEECCHHCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCC
RVWHLHPDIVTLDRGILAQASEHSHLERVLPGLVSLLHESGQLVLMGGITTEREALIALE
EEEEECCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEE
CDVDFVQGQYFAGPSVEPVQPQVAAGIMDTLSAALRLRVAERSRAQEARLAPYVAALLQA
CCCCEECCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SALLREGRDLTEASKELLELPEAARCFLLDASGRQIGDNVLPRVRASQRAKRFSPLMHSE
HHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHCC
GASWERRPYFIEAMRVPGRVHFTPPYLSINEAHLCVTASIATPAAQGMQVLCVDINWEAA
CCCCCCCCEEEEEEECCCEEEECCCCCEECCCEEEEEEECCCCCCCCCEEEEEEECCCCC
AHRD
CCCC
>Mature Secondary Structure 
SMIDIDPPSFQSPRPIAGDDGNRRTVLYGDYTVFSVFQPVFSVSHRRAIGYHASLRAHD
CEECCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCEEEEEEEEC
SQGNQVPSHDVFTQAARRGDLLELGRLAESLHLGNFHTFDSHDEWLFLSLHPAALMDTVY
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHH
GDALLANLKALGLPPQRVVLEVPEQAGGETPRFAAIVDGLRKAGFLIALGGFGAKHSNID
HHHHHHHHHHHCCCHHHHEEECCHHCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCC
RVWHLHPDIVTLDRGILAQASEHSHLERVLPGLVSLLHESGQLVLMGGITTEREALIALE
EEEEECCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEE
CDVDFVQGQYFAGPSVEPVQPQVAAGIMDTLSAALRLRVAERSRAQEARLAPYVAALLQA
CCCCEECCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SALLREGRDLTEASKELLELPEAARCFLLDASGRQIGDNVLPRVRASQRAKRFSPLMHSE
HHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHCC
GASWERRPYFIEAMRVPGRVHFTPPYLSINEAHLCVTASIATPAAQGMQVLCVDINWEAA
CCCCCCCCEEEEEEECCCEEEECCCCCEECCCEEEEEEECCCCCCCCCEEEEEEECCCCC
AHRD
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]