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The map label for this gene is sspB [H]

Identifier: 83718527

GI number: 83718527

Start: 3417661

End: 3418173

Strand: Reverse

Name: sspB [H]

Synonym: BTH_I2973

Alternate gene names: 83718527

Gene position: 3418173-3417661 (Counterclockwise)

Preceding gene: 83721108

Following gene: 83720413

Centisome position: 89.73

GC content: 63.55

Gene sequence:

>513_bases
ATGCAAGAGATTTCCACGAAGCCGTATTTGCTGCGCGCGTTGTACGAGTGGTGCACGGATAACGGATATACGCCCCATAT
CGCGGTGCGGGTCGACAAGTCGACACGCGTGCCGCGCCAGTTCGTGCGCGACGGCGAGATCGTGTTGAACATCAGCTTCG
AGGCGACGAGCCAGTTGCAGATGGGCAACGAATGGATCGAGTTCACTGCGCGGTTCTCGGGCAAGGCGCACAAGATCGAG
GTGCCGGTTGCGAACGTGCTCGCGATCTACGCGCGCGAGAACGGGCAGGGAATGGCGTTTCAGGTCGATGTCGTCGCGGA
GACGGGCGATGCCGAGGGCGGCGACGGGCTTGCTGCGGCGGAAGAGGGAGGCGATGCCGGCACTCACGCTGCGCCCGACG
CCGTGATCGAGGCGGCATCCGAGTCCGATGAACCTGCGGATGAACTGCCGAAGGTCGATGGCGACGGCGAAGGCGCGAAG
GGCAGTCGGCCTCGCCTCAAGATCGTGAAATGA

Upstream 100 bases:

>100_bases
GACGCCGTCCGAAAAGGTCATGCGTCGTTAAGCTGTATGTGACTGGGGAACGGATGCGGCGGCATGGCGCTGCCGCATCC
GTTCCCGTTCGAGGATGGCG

Downstream 100 bases:

>100_bases
GGTAGAATTTCGGGTTCAACGCCGGCTTAGCTCATCTGGTAGAGCAGTTGATTTGTAATCATCAGGTGGCGGGTTCGAGT
CCTGCAGCCGGCACCAATAA

Product: ClpXP protease specificity-enhancing factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKIE
VPVANVLAIYARENGQGMAFQVDVVAETGDAEGGDGLAAAEEGGDAGTHAAPDAVIEAASESDEPADELPKVDGDGEGAK
GSRPRLKIVK

Sequences:

>Translated_170_residues
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKIE
VPVANVLAIYARENGQGMAFQVDVVAETGDAEGGDGLAAAEEGGDAGTHAAPDAVIEAASESDEPADELPKVDGDGEGAK
GSRPRLKIVK
>Mature_170_residues
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKIE
VPVANVLAIYARENGQGMAFQVDVVAETGDAEGGDGLAAAEEGGDAGTHAAPDAVIEAASESDEPADELPKVDGDGEGAK
GSRPRLKIVK

Specific function: Seems to act in concert with sspA in the regulation of several proteins during exponential and stationary-phase growth. The exact function of sspB is not yet known [H]

COG id: COG2969

COG function: function code R; Stringent starvation protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789623, Length=101, Percent_Identity=49.5049504950495, Blast_Score=106, Evalue=7e-25,

Paralogues:

None

Copy number: 297 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007481 [H]

Pfam domain/function: PF04386 SspB [H]

EC number: NA

Molecular weight: Translated: 18274; Mature: 18274

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDKSTRVPRQFVRDGEIVLNISFEATSQLQ
CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCCCEEEEEECCCCCCHH
MGNEWIEFTARFSGKAHKIEVPVANVLAIYARENGQGMAFQVDVVAETGDAEGGDGLAAA
CCCCEEEEEEECCCCEEEEECCHHHEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCEEC
EEGGDAGTHAAPDAVIEAASESDEPADELPKVDGDGEGAKGSRPRLKIVK
CCCCCCCCCCCCHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEC
>Mature Secondary Structure
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDKSTRVPRQFVRDGEIVLNISFEATSQLQ
CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCCCEEEEEECCCCCCHH
MGNEWIEFTARFSGKAHKIEVPVANVLAIYARENGQGMAFQVDVVAETGDAEGGDGLAAA
CCCCEEEEEEECCCCEEEEECCHHHEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCEEC
EEGGDAGTHAAPDAVIEAASESDEPADELPKVDGDGEGAKGSRPRLKIVK
CCCCCCCCCCCCHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]