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The map label for this gene is yfgF [C]

Identifier: 83718493

GI number: 83718493

Start: 3266229

End: 3267512

Strand: Direct

Name: yfgF [C]

Synonym: BTH_I2848

Alternate gene names: 83718493

Gene position: 3266229-3267512 (Clockwise)

Preceding gene: 83718720

Following gene: 83718833

Centisome position: 85.75

GC content: 67.37

Gene sequence:

>1284_bases
ATGCCGAAAACGCAGGGGCTCTCGCCCGAAAGCCTGATTTCGCAGTTCGCCCGCTGTGAAGAAGGCTGGTGTGTGCAGTA
TCACGACGTCATCCTTGCAAGTGCTTTTCAACCGGTCATCTCGATCACGCACAAGCGCGTCGTCGGCTACGAGGCGCTCG
TGCGCGCGACCGACGCGAACAACGCGCAGATTTCGCCCGACACGCTGTTCGCGCGCGCGCAGGCGCGCGGCGAGACGATC
CTGCTCGATCGGCTGACCCGCTGCCTGCACGTGGCGAACTTCTCCGAGCAGGACACAGGCTCGTGCTGGCTGTTCCTGAA
CGTGCTGCCGCAGATGTTCGACGCCGGCATCGCGCCGAGCGTGTTCATCGAGGCGCTCTGCGCGCACTTCGCGCTGCCGC
CGACGCGCGTCGTGCTCGAAGTGATCGAGCAGCCGTCGCGCAACGAGCCCGCGCTCGCCCGCACGCTCGACATGATTCAG
CACGGCGATTTCCTGATTGCGGTCGACGATTTCGGCACCGGCTTCTCGAACTTCGACCGCATCTGGCAGATCAAGCCCGA
CATCGTGAAGCTCGACCGCTCGATCCTCGAGCGCTCGCTCGCGGCGAGCGACGCGCACCGCATCGTCCATCATCTCGTCA
CGATGCTGCACCACGCGGGCACGATGGTGCTCGCGGAAGGCGTCGAGAACGAAGACGCGCTGCAGATCCTGATGGATGCC
GACGTCGACTTCGTTCAGGGCTTCTGCTTCGGCCTGCCCGATCCGTCGCTCGAGCGTGCGCGCCGCGCCGCGCCGGCGCG
CATCGAAACCGCGTGGCAACGCTTCGCCGAGCGCGTGAAGGAGCGTCGCGGCGACGTCGTGCATCCTGGCTTCGACACGA
TCGAGCGGATCGTGCTCGCGGGCGCCGCCGACTATGCGCAGGCCCGGGATTTGCGTGGCGCCGCGCAGCGGCTGCTGACG
AACCCGATCGTGCGGCGCGTGTTCGTTGCGGAAGCGAACGGCGAGCAAGTGGAGCCGTCGGTCACGAACGAAACGCCGGA
CACGCCGAGCGCGACGACGCGGCGGCTCGCGCCGCTGCTGCCGGAGCTGCATTGCAACTGGTCGCGGCGCGCGTATTTCC
AGCGCGCGGTCGCGGCGCCCGGACGCGTCGCGCTGATGGGGCCGCACTTCTCGCTGACGGACGGGCGCGACTGCTACACG
GCCGCCGTCGCGATCCATCTCGGCACGACACTGAAGGTGTTCTGCGTCGACTTCGACTTCTCGTCGTACGGGGACGGGCA
GTAG

Upstream 100 bases:

>100_bases
ACGCCTTTCGTCTTTCGCCGCGTGGCCCTCATCAGCGCTCGCGAGCACGTCCGCCGCGCGAGACGCGCCCTTTGCCGCTC
GTCGCGGCGACGCTGACAAC

Downstream 100 bases:

>100_bases
GCGAGGCAAAAAGCACGACGAATTGGCGGACGCATCGGCACGACGCCGGCCGGCTGGCGAGCGGCGCCCCGGCATTCGAA
CCGCACGCTCGAGCACGCGC

Product: EAL domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MPKTQGLSPESLISQFARCEEGWCVQYHDVILASAFQPVISITHKRVVGYEALVRATDANNAQISPDTLFARAQARGETI
LLDRLTRCLHVANFSEQDTGSCWLFLNVLPQMFDAGIAPSVFIEALCAHFALPPTRVVLEVIEQPSRNEPALARTLDMIQ
HGDFLIAVDDFGTGFSNFDRIWQIKPDIVKLDRSILERSLAASDAHRIVHHLVTMLHHAGTMVLAEGVENEDALQILMDA
DVDFVQGFCFGLPDPSLERARRAAPARIETAWQRFAERVKERRGDVVHPGFDTIERIVLAGAADYAQARDLRGAAQRLLT
NPIVRRVFVAEANGEQVEPSVTNETPDTPSATTRRLAPLLPELHCNWSRRAYFQRAVAAPGRVALMGPHFSLTDGRDCYT
AAVAIHLGTTLKVFCVDFDFSSYGDGQ

Sequences:

>Translated_427_residues
MPKTQGLSPESLISQFARCEEGWCVQYHDVILASAFQPVISITHKRVVGYEALVRATDANNAQISPDTLFARAQARGETI
LLDRLTRCLHVANFSEQDTGSCWLFLNVLPQMFDAGIAPSVFIEALCAHFALPPTRVVLEVIEQPSRNEPALARTLDMIQ
HGDFLIAVDDFGTGFSNFDRIWQIKPDIVKLDRSILERSLAASDAHRIVHHLVTMLHHAGTMVLAEGVENEDALQILMDA
DVDFVQGFCFGLPDPSLERARRAAPARIETAWQRFAERVKERRGDVVHPGFDTIERIVLAGAADYAQARDLRGAAQRLLT
NPIVRRVFVAEANGEQVEPSVTNETPDTPSATTRRLAPLLPELHCNWSRRAYFQRAVAAPGRVALMGPHFSLTDGRDCYT
AAVAIHLGTTLKVFCVDFDFSSYGDGQ
>Mature_426_residues
PKTQGLSPESLISQFARCEEGWCVQYHDVILASAFQPVISITHKRVVGYEALVRATDANNAQISPDTLFARAQARGETIL
LDRLTRCLHVANFSEQDTGSCWLFLNVLPQMFDAGIAPSVFIEALCAHFALPPTRVVLEVIEQPSRNEPALARTLDMIQH
GDFLIAVDDFGTGFSNFDRIWQIKPDIVKLDRSILERSLAASDAHRIVHHLVTMLHHAGTMVLAEGVENEDALQILMDAD
VDFVQGFCFGLPDPSLERARRAAPARIETAWQRFAERVKERRGDVVHPGFDTIERIVLAGAADYAQARDLRGAAQRLLTN
PIVRRVFVAEANGEQVEPSVTNETPDTPSATTRRLAPLLPELHCNWSRRAYFQRAVAAPGRVALMGPHFSLTDGRDCYTA
AVAIHLGTTLKVFCVDFDFSSYGDGQ

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788849, Length=230, Percent_Identity=25.2173913043478, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1790496, Length=247, Percent_Identity=24.6963562753036, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI87081845, Length=230, Percent_Identity=28.695652173913, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI87081743, Length=240, Percent_Identity=25, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1786507, Length=230, Percent_Identity=24.7826086956522, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI87081980, Length=226, Percent_Identity=25.2212389380531, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87081921, Length=231, Percent_Identity=23.3766233766234, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87082096, Length=131, Percent_Identity=28.2442748091603, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1788502, Length=231, Percent_Identity=24.6753246753247, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR003018
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00563 EAL; PF01590 GAF; PF00990 GGDEF; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 47311; Mature: 47180

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKTQGLSPESLISQFARCEEGWCVQYHDVILASAFQPVISITHKRVVGYEALVRATDAN
CCCCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
NAQISPDTLFARAQARGETILLDRLTRCLHVANFSEQDTGSCWLFLNVLPQMFDAGIAPS
CCEECHHHHHHHHHHCCCEEHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCCCCCHH
VFIEALCAHFALPPTRVVLEVIEQPSRNEPALARTLDMIQHGDFLIAVDDFGTGFSNFDR
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHH
IWQIKPDIVKLDRSILERSLAASDAHRIVHHLVTMLHHAGTMVLAEGVENEDALQILMDA
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHC
DVDFVQGFCFGLPDPSLERARRAAPARIETAWQRFAERVKERRGDVVHPGFDTIERIVLA
CHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
GAADYAQARDLRGAAQRLLTNPIVRRVFVAEANGEQVEPSVTNETPDTPSATTRRLAPLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
PELHCNWSRRAYFQRAVAAPGRVALMGPHFSLTDGRDCYTAAVAIHLGTTLKVFCVDFDF
HHHCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHEECCEEEEEEEEECC
SSYGDGQ
CCCCCCC
>Mature Secondary Structure 
PKTQGLSPESLISQFARCEEGWCVQYHDVILASAFQPVISITHKRVVGYEALVRATDAN
CCCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
NAQISPDTLFARAQARGETILLDRLTRCLHVANFSEQDTGSCWLFLNVLPQMFDAGIAPS
CCEECHHHHHHHHHHCCCEEHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCCCCCHH
VFIEALCAHFALPPTRVVLEVIEQPSRNEPALARTLDMIQHGDFLIAVDDFGTGFSNFDR
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHH
IWQIKPDIVKLDRSILERSLAASDAHRIVHHLVTMLHHAGTMVLAEGVENEDALQILMDA
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHC
DVDFVQGFCFGLPDPSLERARRAAPARIETAWQRFAERVKERRGDVVHPGFDTIERIVLA
CHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
GAADYAQARDLRGAAQRLLTNPIVRRVFVAEANGEQVEPSVTNETPDTPSATTRRLAPLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
PELHCNWSRRAYFQRAVAAPGRVALMGPHFSLTDGRDCYTAAVAIHLGTTLKVFCVDFDF
HHHCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHEECCEEEEEEEEECC
SSYGDGQ
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1661370 [H]