Click here to switch to the map view.

The map label for this gene is rpoS

Identifier: 83644704

GI number:

Start: 1911778

End: 1912776

Strand: Direct

Name: rpoS

Synonym: HCH_01877

Alternate gene names: NA

Gene position: NA

Preceding gene: 83644703

Following gene: 83644705

Centisome position: NA

GC content: NA

Gene sequence:

>999_bases
ATGGCAGCAGAACGTGAATCTTACGCAGAAGATTTAGCTTACGATGTTGATATCGATTTGGCCGAAATTGAGGCTGAAGA
GTTTGAAGACGATGAAAGTGATGTTGTTGTCTCGATTGATCAAGGACGTACCGGTCGTTTCTCCCTAGGCGAAGGCCAAT
CCTACAGAAACCTCGACGCCACTCAGATTTATCTGAACGAAATCGGTTTCTCTCCCTTACTGACCCCTGAAGAAGAAGTT
CATTTTGCGCGCATGGCGCGTCGCGGCGATGAAAAAGGCCGCAAACGCATGATTGAGAGCAATCTGCGTCTGGTTGTGAA
AATCGCCCGTAGATATGTGAATAGAGGCCTGAGCCTGCTAGACCTCATTGAGGAAGGCAACCTGGGTCTGATTCGCGCTG
TTGAAAAATTTGATCCCGAACGCGGTTTCAGGTTTTCAACCTACGCGACGTGGTGGATTCGTCAGACTATTGAGCGGGCC
ATCATGAATCAGACAAGGACGATCCGTTTGCCGATTCACGTTGTTAAGGAATTGAATGTGTACCTTCGCGCTTCCCGCGA
ACTGACCCAGAAATTGGATCATGAGCCCAGCGCTGAAGAAATCGCCGACTTGCTGGAAAAGCCGGTGAAGGATGTTAAAC
GTATGCTCGGTCTGAACGAGCGCATCACCTCCGTAGACTCGCCGATTGGCGGCAATGCGGAAAAATCCCTTCTTGATACC
GTCGCCGATGAGGCGAGCAATGATCCTGCTGAGCTGTTGCAGGATAGCGATCTTAAAGGCTGTCTGGACCGTTGGCTTGA
CCAATTGTCTGACAAACAACAGGAAGTGATCGCCCGTCGATTCGGATTGCGCGGTTATCCCATGAGCACATTGGAAGAAG
TAGGCCAGGAAATCGGGCTGACCCGGGAAAGAGTGCGTCAGATTCAAGTGGAAGCGCTCAAACGCATGCGCGAACTGCTG
GAAAAAGAAGGTTTGACCGGAGACACGCTGTTTAAGTAA

Upstream 100 bases:

>100_bases
GACCCTCTCAAGTACCTACCAAAACGATAAAACTTGCGCCTGAGCAAGTGCAAAACGTCATCAATACCCCGCAAGGGGTT
AACGAGAGCAGGGCATCATC

Downstream 100 bases:

>100_bases
CTATTGGTTACACACGTAGCAGTAAAAAGGGCGCAACAGGCGCCCTTTTTTAGTAGTCCGGTTAGACTTGATGTCAGGAA
CGCCTTGCCCCTATAGTTGC

Product: nonessential primary sigma factor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>332_residues
MAAERESYAEDLAYDVDIDLAEIEAEEFEDDESDVVVSIDQGRTGRFSLGEGQSYRNLDATQIYLNEIGFSPLLTPEEEV
HFARMARRGDEKGRKRMIESNLRLVVKIARRYVNRGLSLLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERA
IMNQTRTIRLPIHVVKELNVYLRASRELTQKLDHEPSAEEIADLLEKPVKDVKRMLGLNERITSVDSPIGGNAEKSLLDT
VADEASNDPAELLQDSDLKGCLDRWLDQLSDKQQEVIARRFGLRGYPMSTLEEVGQEIGLTRERVRQIQVEALKRMRELL
EKEGLTGDTLFK

Sequences:
NA

Specific function: NA

COG id: COG0568

COG function: function code K; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA