Click here to switch to the map view.

The map label for this gene is ybaF [H]

Identifier: 83591243

GI number: 83591243

Start: 2549216

End: 2550010

Strand: Reverse

Name: ybaF [H]

Synonym: Moth_2427

Alternate gene names: 83591243

Gene position: 2550010-2549216 (Counterclockwise)

Preceding gene: 83591244

Following gene: 83591242

Centisome position: 97.0

GC content: 61.89

Gene sequence:

>795_bases
ATGGTGGTGGCCTTTGAATTGGGCCAATATGTACCAGGGAACAGCGCCATCCACCGCCTGGATCCACGGTCGAAGTTGCT
GGGCCTGTTCCTTTACGGCCTGGCCCTTCTAGTGGCTCCCACCGGTGAATCGGCTTTCCTCGCAGGGGCCGTAGCCCTAC
CCGCGGTCCTGGCGGCCGGCTTATCACCATCCTTTATCTGGAAGCAGCTGCGGCCGCTGGCCTTCTTTCTGGCTCTTATT
TTTTTCCTCCAGCTTGCCACTACGCCGGGGACGATCCTGGTGTATCTAGGGCCCGTGCCGGTAACCCGTGAGGGATTCAA
CCTGGGCCTCCTGGCCCTGGCCCGGGTATTTTTCCTGATTTTGGCTGCCGTTCTGCTTACGGCCACTACTGACCCCCTGG
CTCTGGCCGACGGGTTGGAGCGCCTCCTGGCGCCGGGCCAGAGGATCGGCTTGCCGTCCCAGGAACTGGCCCTGATGCTG
ACCCTGGCTTTGCGTTTTGTCCCCACCCTCCTGGAAGAGGCCGAGAGGATTATGCGCGCTCAGATGGCCCGCGGGGCCTC
CTTCCGGGGCCTGCAGGTAAAAAACCTTTTGCCCCTGGTCATCCCCCTCTTTGTCAGCGCCTTTCGCCGGGCGGAAGGCC
TGGCGGAAGCCATGGAAGCGCGGGCGTACCAGGGGGGCAAAGGCCGCACCAGGATGCGGGAGTTAAACTTCACAGCAACC
GATTTTCTCTTTCTTCTGCTGGCTGGCGCCCTGGCAGCTGGAACGTTATTTTACCGGCTGAAGTCCGGCAACTAG

Upstream 100 bases:

>100_bases
CAAGAAGCCATCCTGCACTGGCTAAAGGGGTGAGCAGGAAATTTAATGGTGTGGCAGCTGGTGGTTTTACAGGGATGCCA
TAGTCTGGGTTAAAGGAGGG

Downstream 100 bases:

>100_bases
CCGGCCGGGCCGGCGTTTTCCCCAGGCCCCTGGTATTTTCCCTTTCAGCACGCGGAGGATTACTGGCGATGCCCTGCCTG
AAGATTACCCTGGCCTATGA

Product: cobalt transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MVVAFELGQYVPGNSAIHRLDPRSKLLGLFLYGLALLVAPTGESAFLAGAVALPAVLAAGLSPSFIWKQLRPLAFFLALI
FFLQLATTPGTILVYLGPVPVTREGFNLGLLALARVFFLILAAVLLTATTDPLALADGLERLLAPGQRIGLPSQELALML
TLALRFVPTLLEEAERIMRAQMARGASFRGLQVKNLLPLVIPLFVSAFRRAEGLAEAMEARAYQGGKGRTRMRELNFTAT
DFLFLLLAGALAAGTLFYRLKSGN

Sequences:

>Translated_264_residues
MVVAFELGQYVPGNSAIHRLDPRSKLLGLFLYGLALLVAPTGESAFLAGAVALPAVLAAGLSPSFIWKQLRPLAFFLALI
FFLQLATTPGTILVYLGPVPVTREGFNLGLLALARVFFLILAAVLLTATTDPLALADGLERLLAPGQRIGLPSQELALML
TLALRFVPTLLEEAERIMRAQMARGASFRGLQVKNLLPLVIPLFVSAFRRAEGLAEAMEARAYQGGKGRTRMRELNFTAT
DFLFLLLAGALAAGTLFYRLKSGN
>Mature_264_residues
MVVAFELGQYVPGNSAIHRLDPRSKLLGLFLYGLALLVAPTGESAFLAGAVALPAVLAAGLSPSFIWKQLRPLAFFLALI
FFLQLATTPGTILVYLGPVPVTREGFNLGLLALARVFFLILAAVLLTATTDPLALADGLERLLAPGQRIGLPSQELALML
TLALRFVPTLLEEAERIMRAQMARGASFRGLQVKNLLPLVIPLFVSAFRRAEGLAEAMEARAYQGGKGRTRMRELNFTAT
DFLFLLLAGALAAGTLFYRLKSGN

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003339 [H]

Pfam domain/function: PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 28424; Mature: 28424

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVAFELGQYVPGNSAIHRLDPRSKLLGLFLYGLALLVAPTGESAFLAGAVALPAVLAAG
CEEEEECCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
LSPSFIWKQLRPLAFFLALIFFLQLATTPGTILVYLGPVPVTREGFNLGLLALARVFFLI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
LAAVLLTATTDPLALADGLERLLAPGQRIGLPSQELALMLTLALRFVPTLLEEAERIMRA
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QMARGASFRGLQVKNLLPLVIPLFVSAFRRAEGLAEAMEARAYQGGKGRTRMRELNFTAT
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHH
DFLFLLLAGALAAGTLFYRLKSGN
HHHHHHHHHHHHHHHHHHEEECCC
>Mature Secondary Structure
MVVAFELGQYVPGNSAIHRLDPRSKLLGLFLYGLALLVAPTGESAFLAGAVALPAVLAAG
CEEEEECCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
LSPSFIWKQLRPLAFFLALIFFLQLATTPGTILVYLGPVPVTREGFNLGLLALARVFFLI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
LAAVLLTATTDPLALADGLERLLAPGQRIGLPSQELALMLTLALRFVPTLLEEAERIMRA
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QMARGASFRGLQVKNLLPLVIPLFVSAFRRAEGLAEAMEARAYQGGKGRTRMRELNFTAT
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHH
DFLFLLLAGALAAGTLFYRLKSGN
HHHHHHHHHHHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]