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The map label for this gene is ygeR [C]

Identifier: 83591217

GI number: 83591217

Start: 2520717

End: 2521610

Strand: Reverse

Name: ygeR [C]

Synonym: Moth_2401

Alternate gene names: 83591217

Gene position: 2521610-2520717 (Counterclockwise)

Preceding gene: 83591218

Following gene: 83591216

Centisome position: 95.92

GC content: 59.96

Gene sequence:

>894_bases
ATGCTGCCACAAAAGATGGCGGTAACCCTGGCCCTGGGGTTAACCGTGCTCATTACCGGTCCGGGCATCCTGCCGGCCCG
GGCGGCCGTCATCGATGACTTACAGCAGGTAGCAGCTGTCATAGCTCCGGCGGAATACCAGGAACTGGCGAGCCGGGTCA
ATAGTTATACCCGTATTTACCGGGTGGAAGAAGGCGATACCCTGGCCAGCCTGGGCCGGCGTTTTCAGGCCGACCCGGAG
CTCATAGCGGTCATGAATTACCTTGACTCCGGTGCCACCTTGACGCCGGGGCAGTTCCTGGTCCTGCCCCATGAGGAGGC
TCAGACCTATACTGTAGCCAGCGGCGATACCCTCTGGAGTATCGCCCGGCGTTTTGGCGTAGACTTCGATCAATTGGCAG
CCGCTAACGGCATAGTTGATACCCACAACCTTCGCGTAGGTACCGTCCTGACTGTACCCGGTTCGCCTGCCCCGAAGGCC
GCCAGGCCGGTTACGGGCCTGGCTTCCCGGAGTCTGAAACCAGTCTCCATGATATGGCCCCTCATTGGAGCCCTTACCTC
CGGTTTTGGCTGGCGCGGCGGGGAGTTTCACCACGGACTGGATATCGCCGGGAATATGGGCGATAAAATCCGGGCGGCCC
TGGCGGGTACGGTAGTCTTATCCGGATGGGGCAACAGTGTCTATGGCCGCATGGTGAAGATCGACCACGGTAACGGCCTG
GAGACAGTTTATGCCCATACCTCCCGCAACCTGGTGAAGGAAGGCGAGTATGTCCAGGCCGGCGAAGCCATCGCCGAAGT
AGGAGCTACAGGCAATGCCAGCGGCCCCCACGTCCACTTTGAAGTCCGGGAAAAGGGTAAAGCCGTAAACCCCGAACGTT
TCTTAGCCAGGTAA

Upstream 100 bases:

>100_bases
AGTGGGCGGGTATATTTTTGCTAAGGTATGGATAAAATAATGGCTAAATGGCAGTCGGGCCATTATTTAACAAAAAAGTC
AACAGACAGGAGTGAAACCC

Downstream 100 bases:

>100_bases
AAAGGCCGGCCCCCCGGCCTTTTTTTGATGACCGGGAGGAACCGGCCCCCGTAATCAAGAATAAAAAGAAGGCGCTCATG
GCGACTGGCCGTTACCGGCG

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MLPQKMAVTLALGLTVLITGPGILPARAAVIDDLQQVAAVIAPAEYQELASRVNSYTRIYRVEEGDTLASLGRRFQADPE
LIAVMNYLDSGATLTPGQFLVLPHEEAQTYTVASGDTLWSIARRFGVDFDQLAAANGIVDTHNLRVGTVLTVPGSPAPKA
ARPVTGLASRSLKPVSMIWPLIGALTSGFGWRGGEFHHGLDIAGNMGDKIRAALAGTVVLSGWGNSVYGRMVKIDHGNGL
ETVYAHTSRNLVKEGEYVQAGEAIAEVGATGNASGPHVHFEVREKGKAVNPERFLAR

Sequences:

>Translated_297_residues
MLPQKMAVTLALGLTVLITGPGILPARAAVIDDLQQVAAVIAPAEYQELASRVNSYTRIYRVEEGDTLASLGRRFQADPE
LIAVMNYLDSGATLTPGQFLVLPHEEAQTYTVASGDTLWSIARRFGVDFDQLAAANGIVDTHNLRVGTVLTVPGSPAPKA
ARPVTGLASRSLKPVSMIWPLIGALTSGFGWRGGEFHHGLDIAGNMGDKIRAALAGTVVLSGWGNSVYGRMVKIDHGNGL
ETVYAHTSRNLVKEGEYVQAGEAIAEVGATGNASGPHVHFEVREKGKAVNPERFLAR
>Mature_297_residues
MLPQKMAVTLALGLTVLITGPGILPARAAVIDDLQQVAAVIAPAEYQELASRVNSYTRIYRVEEGDTLASLGRRFQADPE
LIAVMNYLDSGATLTPGQFLVLPHEEAQTYTVASGDTLWSIARRFGVDFDQLAAANGIVDTHNLRVGTVLTVPGSPAPKA
ARPVTGLASRSLKPVSMIWPLIGALTSGFGWRGGEFHHGLDIAGNMGDKIRAALAGTVVLSGWGNSVYGRMVKIDHGNGL
ETVYAHTSRNLVKEGEYVQAGEAIAEVGATGNASGPHVHFEVREKGKAVNPERFLAR

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell inner membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87082174, Length=203, Percent_Identity=32.512315270936, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1789099, Length=119, Percent_Identity=41.1764705882353, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI87082297, Length=122, Percent_Identity=35.2459016393443, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI87081989, Length=95, Percent_Identity=38.9473684210526, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 31546; Mature: 31546

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPQKMAVTLALGLTVLITGPGILPARAAVIDDLQQVAAVIAPAEYQELASRVNSYTRIY
CCCHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEE
RVEEGDTLASLGRRFQADPELIAVMNYLDSGATLTPGQFLVLPHEEAQTYTVASGDTLWS
EECCCCHHHHHHHHCCCCHHHHHHHHHHCCCCEECCCEEEEEECCCCCEEEEECCCHHHH
IARRFGVDFDQLAAANGIVDTHNLRVGTVLTVPGSPAPKAARPVTGLASRSLKPVSMIWP
HHHHHCCCHHHHHHHCCCEECCCEEEEEEEECCCCCCCCCCCCCHHHHHCCCCHHHHHHH
LIGALTSGFGWRGGEFHHGLDIAGNMGDKIRAALAGTVVLSGWGNSVYGRMVKIDHGNGL
HHHHHHCCCCCCCCCCCCCCEECCCCCHHHHHHHHCEEEEECCCCCCCEEEEEEECCCCC
ETVYAHTSRNLVKEGEYVQAGEAIAEVGATGNASGPHVHFEVREKGKAVNPERFLAR
EEEEEHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHCC
>Mature Secondary Structure
MLPQKMAVTLALGLTVLITGPGILPARAAVIDDLQQVAAVIAPAEYQELASRVNSYTRIY
CCCHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEE
RVEEGDTLASLGRRFQADPELIAVMNYLDSGATLTPGQFLVLPHEEAQTYTVASGDTLWS
EECCCCHHHHHHHHCCCCHHHHHHHHHHCCCCEECCCEEEEEECCCCCEEEEECCCHHHH
IARRFGVDFDQLAAANGIVDTHNLRVGTVLTVPGSPAPKAARPVTGLASRSLKPVSMIWP
HHHHHCCCHHHHHHHCCCEECCCEEEEEEEECCCCCCCCCCCCCHHHHHCCCCHHHHHHH
LIGALTSGFGWRGGEFHHGLDIAGNMGDKIRAALAGTVVLSGWGNSVYGRMVKIDHGNGL
HHHHHHCCCCCCCCCCCCCCEECCCCCHHHHHHHHCEEEEECCCCCCCEEEEEEECCCCC
ETVYAHTSRNLVKEGEYVQAGEAIAEVGATGNASGPHVHFEVREKGKAVNPERFLAR
EEEEEHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7959068; 10984043 [H]