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The map label for this gene is lytR [H]

Identifier: 83591182

GI number: 83591182

Start: 2488965

End: 2489924

Strand: Reverse

Name: lytR [H]

Synonym: Moth_2366

Alternate gene names: 83591182

Gene position: 2489924-2488965 (Counterclockwise)

Preceding gene: 83591183

Following gene: 83591181

Centisome position: 94.72

GC content: 58.13

Gene sequence:

>960_bases
ATGGCCATGCATGACCAGTATCAAACCGGGATATGGGATGGAGGTACGGCCCGGGCGCAAAAGCGGCGCAGTTCCCTGTC
CTTGATTACCGGCTTATTAATCCTGGCCGTTTTAACCTTCGCTGCCTTTGCCTACGCCGGCTACCGGGTAGCCGACCTGT
GGCTGGCCGGGAACCTGGCTACGGGGCAGGGCCAGCAGGACGGGAGCGGCATCGCCGAAGCGGCTCCAGGCAACCCGGAG
ACCATTCTCCTCATCGGCGTCGACCAGCGGGTGCCTGGCGAACCCTCCCGGTCGGATACCATTATGCTGGCCGTCCTGGA
CCCGCAAAAACCCGGGGTCGACCTCCTTTCCATTCCCCGGGACACGCGAGTCAAGATCCCCGGCCACGGTTACGACAAGA
TTAACGCCGCCCACGCCTACGGCGGCCCCCAGCTATTGATGGACACCATCAACGATTTTCTGGGCAGCCACGTGGACAAG
TACGTGGAGGTCAATTTCCAGGATTTCCAGAAGATCATCGACATTCTGGGCGGGGTCGATATCGACGTCGACAAGCGCAT
GTACTACCCGGAAGAGAACATAAACTTAAAGCCGGGGTTCCAGCACCTGAACGGCTATGACGCCCTGGCCTACGTCCGCT
ACCGCTACGACCCCGAGGGGGATATCACCAGGGTCGGGCGCCAGCAGAAGTTTATGAAAGCCCTCATCGACCAGACCTTG
AAACTGAGCACCATACCCAAAATACCCAAACTGGTCAGCGAAATCAGCAAGGACGTCAAGACAAACCTCAGCGTCAAAGA
AATGCTCTCCCTGGCCCTGAGCATGAAGGATTTAAACGGTAGCGCCGTCAATACCTACACGATCCCCGGCGAAGGCAAAT
ACGTGGGCGGCGTGAGTTACTATATCGTCGATCAGCAGAAGCTGACTGATGTTCTAGCGTCCATTCCCAACCTGCGCTAG

Upstream 100 bases:

>100_bases
CCACCCCTGCCGCTTAAGCACCCGGAGCCTTCCGCCTGTATCCCCGGTCCCAAAGAAGCCGAACACGGATCGAAATTTAT
CTTTGGGAGAGGAAAAGCAC

Downstream 100 bases:

>100_bases
CCGGGTTCCTTCAGCAGCAAAGATTGATAACCGGGACCTGCTAATTATACTTTAAGCCAGAGGTTTTTATTTTATGTCAA
GTAACTATATCCTGGGGAAC

Product: cell envelope-related transcriptional attenuator

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MAMHDQYQTGIWDGGTARAQKRRSSLSLITGLLILAVLTFAAFAYAGYRVADLWLAGNLATGQGQQDGSGIAEAAPGNPE
TILLIGVDQRVPGEPSRSDTIMLAVLDPQKPGVDLLSIPRDTRVKIPGHGYDKINAAHAYGGPQLLMDTINDFLGSHVDK
YVEVNFQDFQKIIDILGGVDIDVDKRMYYPEENINLKPGFQHLNGYDALAYVRYRYDPEGDITRVGRQQKFMKALIDQTL
KLSTIPKIPKLVSEISKDVKTNLSVKEMLSLALSMKDLNGSAVNTYTIPGEGKYVGGVSYYIVDQQKLTDVLASIPNLR

Sequences:

>Translated_319_residues
MAMHDQYQTGIWDGGTARAQKRRSSLSLITGLLILAVLTFAAFAYAGYRVADLWLAGNLATGQGQQDGSGIAEAAPGNPE
TILLIGVDQRVPGEPSRSDTIMLAVLDPQKPGVDLLSIPRDTRVKIPGHGYDKINAAHAYGGPQLLMDTINDFLGSHVDK
YVEVNFQDFQKIIDILGGVDIDVDKRMYYPEENINLKPGFQHLNGYDALAYVRYRYDPEGDITRVGRQQKFMKALIDQTL
KLSTIPKIPKLVSEISKDVKTNLSVKEMLSLALSMKDLNGSAVNTYTIPGEGKYVGGVSYYIVDQQKLTDVLASIPNLR
>Mature_318_residues
AMHDQYQTGIWDGGTARAQKRRSSLSLITGLLILAVLTFAAFAYAGYRVADLWLAGNLATGQGQQDGSGIAEAAPGNPET
ILLIGVDQRVPGEPSRSDTIMLAVLDPQKPGVDLLSIPRDTRVKIPGHGYDKINAAHAYGGPQLLMDTINDFLGSHVDKY
VEVNFQDFQKIIDILGGVDIDVDKRMYYPEENINLKPGFQHLNGYDALAYVRYRYDPEGDITRVGRQQKFMKALIDQTLK
LSTIPKIPKLVSEISKDVKTNLSVKEMLSLALSMKDLNGSAVNTYTIPGEGKYVGGVSYYIVDQQKLTDVLASIPNLR

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 35034; Mature: 34902

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMHDQYQTGIWDGGTARAQKRRSSLSLITGLLILAVLTFAAFAYAGYRVADLWLAGNLA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
TGQGQQDGSGIAEAAPGNPETILLIGVDQRVPGEPSRSDTIMLAVLDPQKPGVDLLSIPR
CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEECCC
DTRVKIPGHGYDKINAAHAYGGPQLLMDTINDFLGSHVDKYVEVNFQDFQKIIDILGGVD
CCEEEECCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHCCCC
IDVDKRMYYPEENINLKPGFQHLNGYDALAYVRYRYDPEGDITRVGRQQKFMKALIDQTL
CCCCCCEECCCCCCCCCCCHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
KLSTIPKIPKLVSEISKDVKTNLSVKEMLSLALSMKDLNGSAVNTYTIPGEGKYVGGVSY
HHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCEECCEEE
YIVDQQKLTDVLASIPNLR
EEECHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AMHDQYQTGIWDGGTARAQKRRSSLSLITGLLILAVLTFAAFAYAGYRVADLWLAGNLA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
TGQGQQDGSGIAEAAPGNPETILLIGVDQRVPGEPSRSDTIMLAVLDPQKPGVDLLSIPR
CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEECCC
DTRVKIPGHGYDKINAAHAYGGPQLLMDTINDFLGSHVDKYVEVNFQDFQKIIDILGGVD
CCEEEECCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHCCCC
IDVDKRMYYPEENINLKPGFQHLNGYDALAYVRYRYDPEGDITRVGRQQKFMKALIDQTL
CCCCCCEECCCCCCCCCCCHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
KLSTIPKIPKLVSEISKDVKTNLSVKEMLSLALSMKDLNGSAVNTYTIPGEGKYVGGVSY
HHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCEECCEEE
YIVDQQKLTDVLASIPNLR
EEECHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA