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The map label for this gene is ybjY [C]

Identifier: 83591174

GI number: 83591174

Start: 2475320

End: 2476849

Strand: Reverse

Name: ybjY [C]

Synonym: Moth_2355

Alternate gene names: 83591174

Gene position: 2476849-2475320 (Counterclockwise)

Preceding gene: 83591180

Following gene: 83591173

Centisome position: 94.22

GC content: 61.11

Gene sequence:

>1530_bases
ATGGCGACAGCGACGGTAACGGCTAAAGGAGGATTCCTTAGCGGCAAAAGAATAATATGGCTGGTGGCGGTCTTTCTAAC
TTTGATTATCGCCGCCGGGTGGTACTGGTGGGCCCGGGGGCATCAGAAGGCTCCTAATTTCCTGACCGTTACTGCCGGTA
AAGGGAGCATTGTGGAGACTGTAAGCACCTCCGGGAAAATTGAAGCATTACATAGCATCGGCCTCAGCTTTAAGAATCCG
GGGACCATCAAGGCGATATACGTCAAGGAAGGGCAGAGCGTCAAAGCCGGCCAGCTCCTGGCCCTCCAGGACCCAACCGA
TCTGGAGCTTCAGGTCAAGGAGGCCCAGGCGAACCTGGACAATGCCATGGCCAAGCTAAAGAGCCTGCAGGCCGGGCCCC
TGGCTACCGACGTGGCCCAGGCCGAGGCGGGTGTGGAGCAGGCTCAGGTTGAATATGACAACGCCCAGGATACTTTAAAA
CGCGATCAGGCCCTTTATGATGCCGGCGCCCTGTCGGAAGTCGACCTGAACAATGCCCGCAAGGCGGAGGCGACGGCGGC
AGCCAACCTGAAAAAAGCCCAGGCAGCCCTGGAGGCCCTGAAAAACGGCAGCCGGCCGGAGGATATAGCCGCCGCCCAGG
CCCAGGTAGACGCGGCCCGGGCCCAGCTGCAGCTGGCCCAGAATAACCTGGCGGCCACGGAGATCCGGGCACCGTGGGAC
GGTATTGTCACCAACGTCAACGGGCAGGTGGGCCAGCGCGTGGGCAGCAATACCAGCGCCACCGACGCTTCAAATAGTTT
TATTTTTTTAATCTCCCCCGAACTCCAGCTGCGGGTGCAAGTCAATGAAGCCGACATCAACAAAGTCAAGGTGGGGCAGG
ATGTAGAGTTTACGGTCAACGCCCAGCCTGACCGCACCTTTAAAGGCAAGGTGACGGCCATTGCGCCTCAAGCCCAAACC
GTTTCCAACATCCAACTTTATGACGTCCTGGTAAACGTGGGAGACGCGGGAGCGTCCTTAAAGGCCGGCGAGTCGGCCAG
CGTGACCATAATTATCAGCCGCAAAGATAACGTCATTACCATCCCGCGGGCGGCCATCGCCTATGCCGAAGGCTACCTCT
CCCAGGCCGGCAAGACCGCCGGCGGCCGGGCAACCTCGTCAGGGGGGACCTCCGGCGGGGGTAACCGGAGTAGAAGTACC
CAGGGAACGGGAGGTTCGGCAGGCAGTTCGGTGACGGGCGCTTCTACCGCCGGAACTCCCAGCGCCGGGGAAAACCGGGC
CGTAATCCTGGTGCTGGAGGGCGGACGGCCGGTGCAGCGCCAGGTGGTAACCGGCGCCAGCGACGAGCGCAATATCGAAG
TAGTCAGCGGCTTAAAGGCAGGGGAACAGGTCGTAGTCGGCACAGGCAGCGCGAGTACAGGGAGTACCGGCAATACGGGA
AGCACAAGTAGCTCGGGCCGGTCGAGCAGCGGCAGTAACCGTAACACCGGCGGTCCCATGCCGCCGGGCGGCTTTCTCGG
GGGGAGATAA

Upstream 100 bases:

>100_bases
TTTTGAATCAGTAAAGATGCTATAATAAGCTGTGGCCGAGCTGTAACATTTATAATCTTAGCTATCAGGCCGGCATCAGT
ACATAGAAAGAAGGTAGATT

Downstream 100 bases:

>100_bases
AGATGGCCCACCCCGTTATTCAGCTTAAAGAAGTAACGCGGGTTTACTCCCCGGGGTCAAACCAGGTATGGGCGCTACGG
GGTATCAATCTGGAAATAAA

Product: secretion protein HlyD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 508

Protein sequence:

>509_residues
MATATVTAKGGFLSGKRIIWLVAVFLTLIIAAGWYWWARGHQKAPNFLTVTAGKGSIVETVSTSGKIEALHSIGLSFKNP
GTIKAIYVKEGQSVKAGQLLALQDPTDLELQVKEAQANLDNAMAKLKSLQAGPLATDVAQAEAGVEQAQVEYDNAQDTLK
RDQALYDAGALSEVDLNNARKAEATAAANLKKAQAALEALKNGSRPEDIAAAQAQVDAARAQLQLAQNNLAATEIRAPWD
GIVTNVNGQVGQRVGSNTSATDASNSFIFLISPELQLRVQVNEADINKVKVGQDVEFTVNAQPDRTFKGKVTAIAPQAQT
VSNIQLYDVLVNVGDAGASLKAGESASVTIIISRKDNVITIPRAAIAYAEGYLSQAGKTAGGRATSSGGTSGGGNRSRST
QGTGGSAGSSVTGASTAGTPSAGENRAVILVLEGGRPVQRQVVTGASDERNIEVVSGLKAGEQVVVGTGSASTGSTGNTG
STSSSGRSSSGSNRNTGGPMPPGGFLGGR

Sequences:

>Translated_509_residues
MATATVTAKGGFLSGKRIIWLVAVFLTLIIAAGWYWWARGHQKAPNFLTVTAGKGSIVETVSTSGKIEALHSIGLSFKNP
GTIKAIYVKEGQSVKAGQLLALQDPTDLELQVKEAQANLDNAMAKLKSLQAGPLATDVAQAEAGVEQAQVEYDNAQDTLK
RDQALYDAGALSEVDLNNARKAEATAAANLKKAQAALEALKNGSRPEDIAAAQAQVDAARAQLQLAQNNLAATEIRAPWD
GIVTNVNGQVGQRVGSNTSATDASNSFIFLISPELQLRVQVNEADINKVKVGQDVEFTVNAQPDRTFKGKVTAIAPQAQT
VSNIQLYDVLVNVGDAGASLKAGESASVTIIISRKDNVITIPRAAIAYAEGYLSQAGKTAGGRATSSGGTSGGGNRSRST
QGTGGSAGSSVTGASTAGTPSAGENRAVILVLEGGRPVQRQVVTGASDERNIEVVSGLKAGEQVVVGTGSASTGSTGNTG
STSSSGRSSSGSNRNTGGPMPPGGFLGGR
>Mature_508_residues
ATATVTAKGGFLSGKRIIWLVAVFLTLIIAAGWYWWARGHQKAPNFLTVTAGKGSIVETVSTSGKIEALHSIGLSFKNPG
TIKAIYVKEGQSVKAGQLLALQDPTDLELQVKEAQANLDNAMAKLKSLQAGPLATDVAQAEAGVEQAQVEYDNAQDTLKR
DQALYDAGALSEVDLNNARKAEATAAANLKKAQAALEALKNGSRPEDIAAAQAQVDAARAQLQLAQNNLAATEIRAPWDG
IVTNVNGQVGQRVGSNTSATDASNSFIFLISPELQLRVQVNEADINKVKVGQDVEFTVNAQPDRTFKGKVTAIAPQAQTV
SNIQLYDVLVNVGDAGASLKAGESASVTIIISRKDNVITIPRAAIAYAEGYLSQAGKTAGGRATSSGGTSGGGNRSRSTQ
GTGGSAGSSVTGASTAGTPSAGENRAVILVLEGGRPVQRQVVTGASDERNIEVVSGLKAGEQVVVGTGSASTGSTGNTGS
TSSSGRSSSGSNRNTGGPMPPGGFLGGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0194 family [H]

Homologues:

Organism=Escherichia coli, GI87081796, Length=444, Percent_Identity=26.8018018018018, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1787013, Length=325, Percent_Identity=29.8461538461538, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI1790024, Length=260, Percent_Identity=29.6153846153846, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1790012, Length=237, Percent_Identity=28.2700421940928, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1790519, Length=238, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143
- InterPro:   IPR022936 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 52113; Mature: 51981

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATATVTAKGGFLSGKRIIWLVAVFLTLIIAAGWYWWARGHQKAPNFLTVTAGKGSIVET
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCHHEEECCCCCCCCEEEEECCCCCEEEE
VSTSGKIEALHSIGLSFKNPGTIKAIYVKEGQSVKAGQLLALQDPTDLELQVKEAQANLD
ECCCCCEEEHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCEEEEEHHHCCHH
NAMAKLKSLQAGPLATDVAQAEAGVEQAQVEYDNAQDTLKRDQALYDAGALSEVDLNNAR
HHHHHHHHCCCCCCHHHHHHHHCCCHHHEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCC
KAEATAAANLKKAQAALEALKNGSRPEDIAAAQAQVDAARAQLQLAQNNLAATEIRAPWD
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
GIVTNVNGQVGQRVGSNTSATDASNSFIFLISPELQLRVQVNEADINKVKVGQDVEFTVN
CEEECCCCHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCEEECCCCEEEEEE
AQPDRTFKGKVTAIAPQAQTVSNIQLYDVLVNVGDAGASLKAGESASVTIIISRKDNVIT
CCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEE
IPRAAIAYAEGYLSQAGKTAGGRATSSGGTSGGGNRSRSTQGTGGSAGSSVTGASTAGTP
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SAGENRAVILVLEGGRPVQRQVVTGASDERNIEVVSGLKAGEQVVVGTGSASTGSTGNTG
CCCCCCEEEEEECCCCCCHHHEECCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCC
STSSSGRSSSGSNRNTGGPMPPGGFLGGR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATATVTAKGGFLSGKRIIWLVAVFLTLIIAAGWYWWARGHQKAPNFLTVTAGKGSIVET
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCHHEEECCCCCCCCEEEEECCCCCEEEE
VSTSGKIEALHSIGLSFKNPGTIKAIYVKEGQSVKAGQLLALQDPTDLELQVKEAQANLD
ECCCCCEEEHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCEEEEEHHHCCHH
NAMAKLKSLQAGPLATDVAQAEAGVEQAQVEYDNAQDTLKRDQALYDAGALSEVDLNNAR
HHHHHHHHCCCCCCHHHHHHHHCCCHHHEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCC
KAEATAAANLKKAQAALEALKNGSRPEDIAAAQAQVDAARAQLQLAQNNLAATEIRAPWD
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
GIVTNVNGQVGQRVGSNTSATDASNSFIFLISPELQLRVQVNEADINKVKVGQDVEFTVN
CEEECCCCHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCEEECCCCEEEEEE
AQPDRTFKGKVTAIAPQAQTVSNIQLYDVLVNVGDAGASLKAGESASVTIIISRKDNVIT
CCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEE
IPRAAIAYAEGYLSQAGKTAGGRATSSGGTSGGGNRSRSTQGTGGSAGSSVTGASTAGTP
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SAGENRAVILVLEGGRPVQRQVVTGASDERNIEVVSGLKAGEQVVVGTGSASTGSTGNTG
CCCCCCEEEEEECCCCCCHHHEECCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCC
STSSSGRSSSGSNRNTGGPMPPGGFLGGR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA