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The map label for this gene is cdaR [H]

Identifier: 83591170

GI number: 83591170

Start: 2470892

End: 2472064

Strand: Reverse

Name: cdaR [H]

Synonym: Moth_2351

Alternate gene names: 83591170

Gene position: 2472064-2470892 (Counterclockwise)

Preceding gene: 83591172

Following gene: 83591167

Centisome position: 94.04

GC content: 41.43

Gene sequence:

>1173_bases
ATGAGCCAGCTAATGCTTTCTGCCAATTTGGCCCAAAAGATAGTAAAGAAGATTATGGGGACTCTGGGGAAAAACATTAA
TATTATGGACGCCCAGGGAAGAATCATTGCCAGCGGTAACCCCCGAAGGGTAGGAGAAAAACACAGGGCTGCCTTCGAAG
CTTCAAGTAAAGGTGAACCCATCATAGTCAGGGAAAATGATATGAATATGTTTGGTGTGAAATATCAAGGTGTGAATATG
CCTATAAGATTTAAAGGAACCGTTGTGGGAGTAATAGGCGTAACCGGTAACCCGGATGAAATTCTGTCTTACGTCGAACT
TGTCCGGGATTTTGCCGAGATGATGATTGAAGAAGCCGTTCTAAGGGAGCAATTTTATTTAGAGACACAAGCCCTGGAGA
GTTTTATTCAGAAACTCGTAGCCGGTGAGACAAAGCTTTCCGAAGAAGAGATTATAGATAAAGCCGAATTGTTCGGCATT
GATTATCACATATCCCGGAGCGTTTGCCTGTTCCTTACGTACCCCCTTAATGATGGTAATAACATGGTAGAACAAAATGA
ACATAAATTTTTATCAATATTGCAGGCGAGTTTTAAAATGGCTGATGGGGAGATATTAGTCCGCGGGGGAGCGGGAAAGT
TTATTCTTCTGAAAAAGGGGGTTAAAGATATACCCACCTTTCTTGCCCAATTAAATACGCTATGTGATAAATTAACCATT
GAGAGTAAGCTCGCAGTTTCCGTGGGTATAGGTAGTTTCGGTCCTAACCTGGCTCATGTTATAAAATCCTATGAGGAAGC
CCTTAAGGCTGTTACCATTGGCAGGCAATTTTATCCCCAGCTAAAGGTATTTAATTATGACGATCTTAAAGTTGAACGTG
TCATCTGGGAGGTACCACCTGCCAAAAGGAAAAACTTTATAGATGAAATCCTGGGTGCTTTAATTGAAGAGGATACTTTT
CACCATAGGCAATTATATTCAACCATGGAGGCCTTTTTTAAAAACGATCTAGATATCGAGCGTACGGCTAAGGCATTACA
TGTACATCGCAATACCATAATATACCGCTTGAAAAAAATTAAGGAGTGTACCGGTTACGACCCCAGGGGAAGCTTCAGGG
AATTGTTACACCTGGGTATGGCCTATCTATTTTATAAATGTGACGGCAAGTAG

Upstream 100 bases:

>100_bases
TGCCCCCAAAAACCCGTGGAGGAGTCTGAGCCAGCCACCCGCAGGTACTACGAACTGTAAAGTAAGCTTAAAAAATCCTA
CCGTGAGGAGGAGCGTGTAT

Downstream 100 bases:

>100_bases
AATTCCACCATTATCTCCTGCAAGTATTAACGCCCATCTTCGAACCGCAGTTTTCAGAGGCAAGTTTCGGTTTTCGACCC
GGAAAGAGAGCCCACGACGC

Product: CdaR family transcriptional regulator

Products: NA

Alternate protein names: Sugar diacid regulator [H]

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MSQLMLSANLAQKIVKKIMGTLGKNINIMDAQGRIIASGNPRRVGEKHRAAFEASSKGEPIIVRENDMNMFGVKYQGVNM
PIRFKGTVVGVIGVTGNPDEILSYVELVRDFAEMMIEEAVLREQFYLETQALESFIQKLVAGETKLSEEEIIDKAELFGI
DYHISRSVCLFLTYPLNDGNNMVEQNEHKFLSILQASFKMADGEILVRGGAGKFILLKKGVKDIPTFLAQLNTLCDKLTI
ESKLAVSVGIGSFGPNLAHVIKSYEEALKAVTIGRQFYPQLKVFNYDDLKVERVIWEVPPAKRKNFIDEILGALIEEDTF
HHRQLYSTMEAFFKNDLDIERTAKALHVHRNTIIYRLKKIKECTGYDPRGSFRELLHLGMAYLFYKCDGK

Sequences:

>Translated_390_residues
MSQLMLSANLAQKIVKKIMGTLGKNINIMDAQGRIIASGNPRRVGEKHRAAFEASSKGEPIIVRENDMNMFGVKYQGVNM
PIRFKGTVVGVIGVTGNPDEILSYVELVRDFAEMMIEEAVLREQFYLETQALESFIQKLVAGETKLSEEEIIDKAELFGI
DYHISRSVCLFLTYPLNDGNNMVEQNEHKFLSILQASFKMADGEILVRGGAGKFILLKKGVKDIPTFLAQLNTLCDKLTI
ESKLAVSVGIGSFGPNLAHVIKSYEEALKAVTIGRQFYPQLKVFNYDDLKVERVIWEVPPAKRKNFIDEILGALIEEDTF
HHRQLYSTMEAFFKNDLDIERTAKALHVHRNTIIYRLKKIKECTGYDPRGSFRELLHLGMAYLFYKCDGK
>Mature_389_residues
SQLMLSANLAQKIVKKIMGTLGKNINIMDAQGRIIASGNPRRVGEKHRAAFEASSKGEPIIVRENDMNMFGVKYQGVNMP
IRFKGTVVGVIGVTGNPDEILSYVELVRDFAEMMIEEAVLREQFYLETQALESFIQKLVAGETKLSEEEIIDKAELFGID
YHISRSVCLFLTYPLNDGNNMVEQNEHKFLSILQASFKMADGEILVRGGAGKFILLKKGVKDIPTFLAQLNTLCDKLTIE
SKLAVSVGIGSFGPNLAHVIKSYEEALKAVTIGRQFYPQLKVFNYDDLKVERVIWEVPPAKRKNFIDEILGALIEEDTFH
HRQLYSTMEAFFKNDLDIERTAKALHVHRNTIIYRLKKIKECTGYDPRGSFRELLHLGMAYLFYKCDGK

Specific function: Seems to regulate the expression of the operons for the enzymes involved in D-galactarate, D-glucarate and D-glycerate utilization [H]

COG id: COG3835

COG function: function code KT; Sugar diacid utilization regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CdaR family [H]

Homologues:

Organism=Escherichia coli, GI87081694, Length=387, Percent_Identity=28.1653746770026, Blast_Score=150, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008599 [H]

Pfam domain/function: PF05651 Diacid_rec [H]

EC number: NA

Molecular weight: Translated: 44141; Mature: 44010

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLMLSANLAQKIVKKIMGTLGKNINIMDAQGRIIASGNPRRVGEKHRAAFEASSKGEP
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCCHHCCHHHHHHHCCCCCCCE
IIVRENDMNMFGVKYQGVNMPIRFKGTVVGVIGVTGNPDEILSYVELVRDFAEMMIEEAV
EEEEECCCCEEEEEEECCCCCEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
LREQFYLETQALESFIQKLVAGETKLSEEEIIDKAELFGIDYHISRSVCLFLTYPLNDGN
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEECEEEECCEEEEEEEEECCCCC
NMVEQNEHKFLSILQASFKMADGEILVRGGAGKFILLKKGVKDIPTFLAQLNTLCDKLTI
CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
ESKLAVSVGIGSFGPNLAHVIKSYEEALKAVTIGRQFYPQLKVFNYDDLKVERVIWEVPP
CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEHHEECCCC
AKRKNFIDEILGALIEEDTFHHRQLYSTMEAFFKNDLDIERTAKALHVHRNTIIYRLKKI
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
KECTGYDPRGSFRELLHLGMAYLFYKCDGK
HHHCCCCCCHHHHHHHHHHHHHHHEEECCC
>Mature Secondary Structure 
SQLMLSANLAQKIVKKIMGTLGKNINIMDAQGRIIASGNPRRVGEKHRAAFEASSKGEP
CCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCCHHCCHHHHHHHCCCCCCCE
IIVRENDMNMFGVKYQGVNMPIRFKGTVVGVIGVTGNPDEILSYVELVRDFAEMMIEEAV
EEEEECCCCEEEEEEECCCCCEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
LREQFYLETQALESFIQKLVAGETKLSEEEIIDKAELFGIDYHISRSVCLFLTYPLNDGN
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEECEEEECCEEEEEEEEECCCCC
NMVEQNEHKFLSILQASFKMADGEILVRGGAGKFILLKKGVKDIPTFLAQLNTLCDKLTI
CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
ESKLAVSVGIGSFGPNLAHVIKSYEEALKAVTIGRQFYPQLKVFNYDDLKVERVIWEVPP
CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEHHEECCCC
AKRKNFIDEILGALIEEDTFHHRQLYSTMEAFFKNDLDIERTAKALHVHRNTIIYRLKKI
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
KECTGYDPRGSFRELLHLGMAYLFYKCDGK
HHHCCCCCCHHHHHHHHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503; 10762278 [H]