| Definition | Moorella thermoacetica ATCC 39073, complete genome. |
|---|---|
| Accession | NC_007644 |
| Length | 2,628,784 |
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The map label for this gene is amyB [H]
Identifier: 83591161
GI number: 83591161
Start: 2458296
End: 2459960
Strand: Reverse
Name: amyB [H]
Synonym: Moth_2341
Alternate gene names: 83591161
Gene position: 2459960-2458296 (Counterclockwise)
Preceding gene: 83591162
Following gene: 83591160
Centisome position: 93.58
GC content: 44.74
Gene sequence:
>1665_bases ATGGGGGAAGTCTATCTGGTTCTATGTGGAATAATCGATAAAAAATGTAGCTGGTTACCGGCTACTTGGGGAGGGTGTGG ATTGGAAAGAAGGTTAATTAGACGCGGACCTCTAAGCAAGAGATTACTAATGCTCCTCATCTTGACTATACTTGCCGGCA GCTTTGCCTTTTCAGGAAATGCCTTAGCTAACGACAATGAAGAAAATGAACCTGAGAAAATTAATAATGAGGTAGCGGCG GAGGTCAGGAATATCAGTTATCAACTTGATAAAGGTGCGATGGATCCGGGTACGGCAATCAGCCTTTTAATTAGCGAGAT AGATGCACTTGAGGAAATTGACAAAGTCGATATTGAAAGTGCCACCCTGGACGAGGTAAAAAAAGCGGTGTCACTAATCG TTCAAGAAATGCCTTTACTTCCGAATTCTCTTCTAAAGGTTTGGTTTACAGGCAGCAAGGCTGTGGTAGATATAGCTGAA AACGCTATTCCCTACCACCTAGGAAGAGTGATGGATGACGCTAAAAAGCTGGAAGAACATCTAGATAAGCTCGGGTTAAC GGAACAGGCGCAAGACCTAGAAAACGCCAGGCCCTATAACAATTTACTCTTAAAAATACCTGAAGTGGTCGCTAAAAAGG AAATCCAAGTAAATGTGCCTGTAAGTGTTGCCAAAGACCTTATTGCCAGGAACTTGAATTTAAAAATTCAAGGTGATGGT ATTTCTTTTTTAATGCCTGCAAAAGATTTTGATTTTAGTGACGGAACTGCTAGAGTAGCTATTATCTACAAAGAAATGGA GAGCAAGGACCTCCCTAACCTTGACGCGAACTTGACTCTCCATTTTGCCAGCAGAATATATGCTGTCAAGGCTTATCGGC TGGCAGTTAACGGGGCTTCGTCACCGGCAGATTTTAGCCAGCGCGTTCGGATGGCCCTGTCATTTGATCTCGGTAAAGAC AGCGATCCTGCGCGCTTAGGTGCTTTCCGATATGACGAAACGAAAAAAAGATGGATATATATAAAGGGTGTTAATGCTAC TGCTGGCATTATTGAATTACATCTTGAAAATGAAGGTATATATGCCGTCATCGATTATCAAAAGACCTTTGAAGACATTC AAAAACACTGGGCTAAAGCGGATATTGAAGCCATGGCCGCCAGGCAGATAGCAATAGGGGTTACTACCAGTCTATTTATG CCTGATGAACCCCTTAGCAGGGCCCAATTTACCGCTTTATTATTAAGATCTCTTAACAAAAAAGAAATAACTCCGACTAC GCCTACCTTTAAAGACGTGAACTCAGGCGACTGGTTTTATGGTGCCGTTGAAGCCGCTTACCGGGCGGGACTGGTTTCGG GTAAGGAAAAAGATATCTTTGCTCCGCGAGATAATATCACCAGGGAGGAAATGGTCGTTATGCTGGCCCGGGCTCTAAAG GCTGCGGGCTACCATGGTACGGGTAATGTGGGCAGCCTTGAGTGCTTCAGAGACTATGCAGTTATTTCCGATTGGGCCAA GGGTGCCTTTGCTTCCTGCCAGGACGCAGGGATCAATTTGACTCTACCAGATGGCAACTTGCACCCCCATGACGATGCTA CCCGGGCCCAGGCCATGGTAATGTTAAAGGGATTTTCTGATGCGATCCAAACTCTGGACAGATAG
Upstream 100 bases:
>100_bases TCAATAGAGGTTATAAGCTAGTACGGCTTACCTGCCTGCTAGTTTTTATTTTCAGCTCCTCTTTACCCCCTTATGATAAA AATGTAGGTTTAAAATAGTA
Downstream 100 bases:
>100_bases GAAAAAAATAAAGGAAAAGGATGTTGGCGCTGGAAACACTGCCAACACCTTTTTTGTTTAATCGATCTTTATCTGGTCTC CGGGCTCGTTATTTTTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha-amylase/pullulanase; Pullulanase type II; Alpha-amylase; 1,4-alpha-D-glucan glucanohydrolase; Pullulanase; 1,4-alpha-D-glucan glucanohydrolase; Alpha-dextrin endo-1,6-alpha-glucosidase [H]
Number of amino acids: Translated: 554; Mature: 553
Protein sequence:
>554_residues MGEVYLVLCGIIDKKCSWLPATWGGCGLERRLIRRGPLSKRLLMLLILTILAGSFAFSGNALANDNEENEPEKINNEVAA EVRNISYQLDKGAMDPGTAISLLISEIDALEEIDKVDIESATLDEVKKAVSLIVQEMPLLPNSLLKVWFTGSKAVVDIAE NAIPYHLGRVMDDAKKLEEHLDKLGLTEQAQDLENARPYNNLLLKIPEVVAKKEIQVNVPVSVAKDLIARNLNLKIQGDG ISFLMPAKDFDFSDGTARVAIIYKEMESKDLPNLDANLTLHFASRIYAVKAYRLAVNGASSPADFSQRVRMALSFDLGKD SDPARLGAFRYDETKKRWIYIKGVNATAGIIELHLENEGIYAVIDYQKTFEDIQKHWAKADIEAMAARQIAIGVTTSLFM PDEPLSRAQFTALLLRSLNKKEITPTTPTFKDVNSGDWFYGAVEAAYRAGLVSGKEKDIFAPRDNITREEMVVMLARALK AAGYHGTGNVGSLECFRDYAVISDWAKGAFASCQDAGINLTLPDGNLHPHDDATRAQAMVMLKGFSDAIQTLDR
Sequences:
>Translated_554_residues MGEVYLVLCGIIDKKCSWLPATWGGCGLERRLIRRGPLSKRLLMLLILTILAGSFAFSGNALANDNEENEPEKINNEVAA EVRNISYQLDKGAMDPGTAISLLISEIDALEEIDKVDIESATLDEVKKAVSLIVQEMPLLPNSLLKVWFTGSKAVVDIAE NAIPYHLGRVMDDAKKLEEHLDKLGLTEQAQDLENARPYNNLLLKIPEVVAKKEIQVNVPVSVAKDLIARNLNLKIQGDG ISFLMPAKDFDFSDGTARVAIIYKEMESKDLPNLDANLTLHFASRIYAVKAYRLAVNGASSPADFSQRVRMALSFDLGKD SDPARLGAFRYDETKKRWIYIKGVNATAGIIELHLENEGIYAVIDYQKTFEDIQKHWAKADIEAMAARQIAIGVTTSLFM PDEPLSRAQFTALLLRSLNKKEITPTTPTFKDVNSGDWFYGAVEAAYRAGLVSGKEKDIFAPRDNITREEMVVMLARALK AAGYHGTGNVGSLECFRDYAVISDWAKGAFASCQDAGINLTLPDGNLHPHDDATRAQAMVMLKGFSDAIQTLDR >Mature_553_residues GEVYLVLCGIIDKKCSWLPATWGGCGLERRLIRRGPLSKRLLMLLILTILAGSFAFSGNALANDNEENEPEKINNEVAAE VRNISYQLDKGAMDPGTAISLLISEIDALEEIDKVDIESATLDEVKKAVSLIVQEMPLLPNSLLKVWFTGSKAVVDIAEN AIPYHLGRVMDDAKKLEEHLDKLGLTEQAQDLENARPYNNLLLKIPEVVAKKEIQVNVPVSVAKDLIARNLNLKIQGDGI SFLMPAKDFDFSDGTARVAIIYKEMESKDLPNLDANLTLHFASRIYAVKAYRLAVNGASSPADFSQRVRMALSFDLGKDS DPARLGAFRYDETKKRWIYIKGVNATAGIIELHLENEGIYAVIDYQKTFEDIQKHWAKADIEAMAARQIAIGVTTSLFMP DEPLSRAQFTALLLRSLNKKEITPTTPTFKDVNSGDWFYGAVEAAYRAGLVSGKEKDIFAPRDNITREEMVVMLARALKA AGYHGTGNVGSLECFRDYAVISDWAKGAFASCQDAGINLTLPDGNLHPHDDATRAQAMVMLKGFSDAIQTLDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted, cell wall. Note=It C-terminus may serve as an S-layer anchor [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 SLH (S-layer homology) domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006048 - InterPro: IPR013784 - InterPro: IPR008957 - InterPro: IPR003961 - InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR004185 - InterPro: IPR006589 - InterPro: IPR002044 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013783 - InterPro: IPR014756 - InterPro: IPR001119 [H]
Pfam domain/function: PF00128 Alpha-amylase; PF02903 Alpha-amylase_N; PF00395 SLH [H]
EC number: =3.2.1.1; =3.2.1.41 [H]
Molecular weight: Translated: 61142; Mature: 61011
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEVYLVLCGIIDKKCSWLPATWGGCGLERRLIRRGPLSKRLLMLLILTILAGSFAFSGN CCCEEEEEEEHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCEECCC ALANDNEENEPEKINNEVAAEVRNISYQLDKGAMDPGTAISLLISEIDALEEIDKVDIES CCCCCCCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCH ATLDEVKKAVSLIVQEMPLLPNSLLKVWFTGSKAVVDIAENAIPYHLGRVMDDAKKLEEH HHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCEEEEHHHCCCHHHHHHHHHHHHHHHHH LDKLGLTEQAQDLENARPYNNLLLKIPEVVAKKEIQVNVPVSVAKDLIARNLNLKIQGDG HHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCEEEECCC ISFLMPAKDFDFSDGTARVAIIYKEMESKDLPNLDANLTLHFASRIYAVKAYRLAVNGAS EEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEHHHHHHEEEEEEEECCCC SPADFSQRVRMALSFDLGKDSDPARLGAFRYDETKKRWIYIKGVNATAGIIELHLENEGI CCCCHHHHHHHHHEECCCCCCCCHHHCCEEECCCCCEEEEEEECCCCCEEEEEEEECCCE YAVIDYQKTFEDIQKHWAKADIEAMAARQIAIGVTTSLFMPDEPLSRAQFTALLLRSLNK EEEEECHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHHHCCC KEITPTTPTFKDVNSGDWFYGAVEAAYRAGLVSGKEKDIFAPRDNITREEMVVMLARALK CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH AAGYHGTGNVGSLECFRDYAVISDWAKGAFASCQDAGINLTLPDGNLHPHDDATRAQAMV HCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHH MLKGFSDAIQTLDR HHHHHHHHHHHHCC >Mature Secondary Structure GEVYLVLCGIIDKKCSWLPATWGGCGLERRLIRRGPLSKRLLMLLILTILAGSFAFSGN CCEEEEEEEHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCEECCC ALANDNEENEPEKINNEVAAEVRNISYQLDKGAMDPGTAISLLISEIDALEEIDKVDIES CCCCCCCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCH ATLDEVKKAVSLIVQEMPLLPNSLLKVWFTGSKAVVDIAENAIPYHLGRVMDDAKKLEEH HHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCEEEEHHHCCCHHHHHHHHHHHHHHHHH LDKLGLTEQAQDLENARPYNNLLLKIPEVVAKKEIQVNVPVSVAKDLIARNLNLKIQGDG HHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCEEEECCC ISFLMPAKDFDFSDGTARVAIIYKEMESKDLPNLDANLTLHFASRIYAVKAYRLAVNGAS EEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEHHHHHHEEEEEEEECCCC SPADFSQRVRMALSFDLGKDSDPARLGAFRYDETKKRWIYIKGVNATAGIIELHLENEGI CCCCHHHHHHHHHEECCCCCCCCHHHCCEEECCCCCEEEEEEECCCCCEEEEEEEECCCE YAVIDYQKTFEDIQKHWAKADIEAMAARQIAIGVTTSLFMPDEPLSRAQFTALLLRSLNK EEEEECHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHHHCCC KEITPTTPTFKDVNSGDWFYGAVEAAYRAGLVSGKEKDIFAPRDNITREEMVVMLARALK CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH AAGYHGTGNVGSLECFRDYAVISDWAKGAFASCQDAGINLTLPDGNLHPHDDATRAQAMV HCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHH MLKGFSDAIQTLDR HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8195085 [H]