Click here to switch to the map view.

The map label for this gene is rpfG [H]

Identifier: 83591084

GI number: 83591084

Start: 2368290

End: 2369459

Strand: Reverse

Name: rpfG [H]

Synonym: Moth_2263

Alternate gene names: 83591084

Gene position: 2369459-2368290 (Counterclockwise)

Preceding gene: 83591086

Following gene: 83591083

Centisome position: 90.14

GC content: 54.62

Gene sequence:

>1170_bases
GTGCGTAAGATGCCAGTTGAGGCCCTGAAACCGGGTATGGTGGTAGCCCGGGCTATTTACAGCGCCGAGGGGCGGGTCTT
ACTCAATAAAGGGGTAACCCTGAAACCCAGTTACCTGGTTCGCTTGCGGGAACTGGGCATACCGGCAGTTTATATCGTCG
ACGAAGTCCTGGGAGATCTGGAAGTAGAAGACGTTATTAGCGAACAAACCCGGTTGCAGGCCATAAAGGCTATGAAGGAT
CTCTTTGGTACCTGCCCTCAGGGGAAACCTACCCATACTGCTTTGCTGGTCGATTCTGCACGCATCCAGCGGGTGGTCAA
TAGCCTTTTAGAAGATCTTTTAAGCCGTAAAGATCTCATGCTTAATTTAACAGATATCAGAGCCCTGGATGATTACACCT
TTGCCCACTCGGTGAATGTATGCGTGCTGGCCCTGATTACCGGTTTAACCTTACACTACAGTCGCTCCGCTTTAATGCAG
CTGGGGGTGGGGGCGCTGCTTCATGACATCGGCAAGACCTGTCTGCCCCTGAGTATCCTCAACAAACCCGGCAAACTGAC
GGTGGAGGAGTATGAACTGGTCTGCCGCCATCCCCAGTGCGGTTTTGATATTCTCCGGCTGCAGGAAAAAGTGAGCTTGC
TTTCGGCCCGGGTGGCCCTGGAACACCACGAACGTTACAATGGTAGCGGTTACCCCCGGGGATTGAAGGGTGAAGAGATT
CACGAGTTTGCCCGCATCACTGGAGTCGTCGACGTTTACGATGCCCTTACCGCTGACCGGGTTTACCGGCGGGCTTACCC
GCCCCATGAAGCCTATGAGATGCTGGCCGGGGCGGGAAACTTCATCTACGACTACCGGATAGTCAAGGCCTTCCTGTTTA
ATGTTGCTGCCTATCCTGTGGGGACGCTGGTAGAGTTGAATAATGGCGAGATGGGGGTGGTTACCGGGACAGCCCGCGGC
CATTCCCACCAGCCCCGGGTACGTCTCCTCTACCACTCTGATGGAACACCCTATAAAGAGCCAGTTACGATAGACTTGAC
TGTCGATTTACATCGTTTCGTCAGCCGCGTTTTGCCGGCTGCGGCTTTACCGGTAGGAGGCGCCGGGAACCCTGGTACCG
GAGATGACAGGTGGGGCGGCGGGTGTTATAATCTCTATGGAAGGAGATGA

Upstream 100 bases:

>100_bases
GCCTGAAGAGGTCCAGTGCCGGTATCTCCGGCCAGGTATGAGAGGATTTCGTTCCCTTGTGTCGAAATAAAGGCGTGGCG
GGAAAAAGGAGTGGCCGGTA

Downstream 100 bases:

>100_bases
GGTTATGCCGACTTATGATTTTAAATGTAATGAATGCGGGCACCTCTTCAGCCAGTTTGCCGCCATCAAAGAGAGGGACA
AGGTCCGCTGCCCGGAGTGC

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MRKMPVEALKPGMVVARAIYSAEGRVLLNKGVTLKPSYLVRLRELGIPAVYIVDEVLGDLEVEDVISEQTRLQAIKAMKD
LFGTCPQGKPTHTALLVDSARIQRVVNSLLEDLLSRKDLMLNLTDIRALDDYTFAHSVNVCVLALITGLTLHYSRSALMQ
LGVGALLHDIGKTCLPLSILNKPGKLTVEEYELVCRHPQCGFDILRLQEKVSLLSARVALEHHERYNGSGYPRGLKGEEI
HEFARITGVVDVYDALTADRVYRRAYPPHEAYEMLAGAGNFIYDYRIVKAFLFNVAAYPVGTLVELNNGEMGVVTGTARG
HSHQPRVRLLYHSDGTPYKEPVTIDLTVDLHRFVSRVLPAAALPVGGAGNPGTGDDRWGGGCYNLYGRR

Sequences:

>Translated_389_residues
MRKMPVEALKPGMVVARAIYSAEGRVLLNKGVTLKPSYLVRLRELGIPAVYIVDEVLGDLEVEDVISEQTRLQAIKAMKD
LFGTCPQGKPTHTALLVDSARIQRVVNSLLEDLLSRKDLMLNLTDIRALDDYTFAHSVNVCVLALITGLTLHYSRSALMQ
LGVGALLHDIGKTCLPLSILNKPGKLTVEEYELVCRHPQCGFDILRLQEKVSLLSARVALEHHERYNGSGYPRGLKGEEI
HEFARITGVVDVYDALTADRVYRRAYPPHEAYEMLAGAGNFIYDYRIVKAFLFNVAAYPVGTLVELNNGEMGVVTGTARG
HSHQPRVRLLYHSDGTPYKEPVTIDLTVDLHRFVSRVLPAAALPVGGAGNPGTGDDRWGGGCYNLYGRR
>Mature_389_residues
MRKMPVEALKPGMVVARAIYSAEGRVLLNKGVTLKPSYLVRLRELGIPAVYIVDEVLGDLEVEDVISEQTRLQAIKAMKD
LFGTCPQGKPTHTALLVDSARIQRVVNSLLEDLLSRKDLMLNLTDIRALDDYTFAHSVNVCVLALITGLTLHYSRSALMQ
LGVGALLHDIGKTCLPLSILNKPGKLTVEEYELVCRHPQCGFDILRLQEKVSLLSARVALEHHERYNGSGYPRGLKGEEI
HEFARITGVVDVYDALTADRVYRRAYPPHEAYEMLAGAGNFIYDYRIVKAFLFNVAAYPVGTLVELNNGEMGVVTGTARG
HSHQPRVRLLYHSDGTPYKEPVTIDLTVDLHRFVSRVLPAAALPVGGAGNPGTGDDRWGGGCYNLYGRR

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 42960; Mature: 42960

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKMPVEALKPGMVVARAIYSAEGRVLLNKGVTLKPSYLVRLRELGIPAVYIVDEVLGDL
CCCCCHHHHCCHHHHHHHHHCCCCCEEECCCCEECHHHHHHHHHCCCCHHHHHHHHHCCC
EVEDVISEQTRLQAIKAMKDLFGTCPQGKPTHTALLVDSARIQRVVNSLLEDLLSRKDLM
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCEE
LNLTDIRALDDYTFAHSVNVCVLALITGLTLHYSRSALMQLGVGALLHDIGKTCLPLSIL
EEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHH
NKPGKLTVEEYELVCRHPQCGFDILRLQEKVSLLSARVALEHHERYNGSGYPRGLKGEEI
CCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
HEFARITGVVDVYDALTADRVYRRAYPPHEAYEMLAGAGNFIYDYRIVKAFLFNVAAYPV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
GTLVELNNGEMGVVTGTARGHSHQPRVRLLYHSDGTPYKEPVTIDLTVDLHRFVSRVLPA
CEEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEHHHHHHHHHHHH
AALPVGGAGNPGTGDDRWGGGCYNLYGRR
HHCCCCCCCCCCCCCCCCCCCEECCCCCC
>Mature Secondary Structure
MRKMPVEALKPGMVVARAIYSAEGRVLLNKGVTLKPSYLVRLRELGIPAVYIVDEVLGDL
CCCCCHHHHCCHHHHHHHHHCCCCCEEECCCCEECHHHHHHHHHCCCCHHHHHHHHHCCC
EVEDVISEQTRLQAIKAMKDLFGTCPQGKPTHTALLVDSARIQRVVNSLLEDLLSRKDLM
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCEE
LNLTDIRALDDYTFAHSVNVCVLALITGLTLHYSRSALMQLGVGALLHDIGKTCLPLSIL
EEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHH
NKPGKLTVEEYELVCRHPQCGFDILRLQEKVSLLSARVALEHHERYNGSGYPRGLKGEEI
CCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
HEFARITGVVDVYDALTADRVYRRAYPPHEAYEMLAGAGNFIYDYRIVKAFLFNVAAYPV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
GTLVELNNGEMGVVTGTARGHSHQPRVRLLYHSDGTPYKEPVTIDLTVDLHRFVSRVLPA
CEEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEHHHHHHHHHHHH
AALPVGGAGNPGTGDDRWGGGCYNLYGRR
HHCCCCCCCCCCCCCCCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]