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The map label for this gene is nirD [H]

Identifier: 83591021

GI number: 83591021

Start: 2298446

End: 2298964

Strand: Reverse

Name: nirD [H]

Synonym: Moth_2198

Alternate gene names: 83591021

Gene position: 2298964-2298446 (Counterclockwise)

Preceding gene: 83591028

Following gene: 83591020

Centisome position: 87.45

GC content: 55.88

Gene sequence:

>519_bases
ATGCTGGTCGCGAATAAACCATCAATAATCCGTAGTATTATCATTTGTGGAGGAATCCTGTTGGACCAACTCGACCGCCG
GCTCCTCAACCTCATTCAGGAAGAATTCCCCCTGGTGGCGCGTCCCTACCAGGAGATCGGGTGCCGCCTGGGCCTCAGCG
AGGACGAGGTTATCCGGAAGATTAGAAAGCTAAAAACCGAGGGCATTATTCGCCGCCTGGGCGGCGTCTTCGAACTCCGC
CAGCTGGGCTATACCAGCACCCTCTGTGCCCTCAAGGTGCCACCCGGCCGCCTGGAAGAAGTGGCAGCGGTGGTCAATTC
CTTCCCCGGCGTCACCCACAACTATCTCCGGGAACATGACTATAACATGTGGTTTACCCTGATTGGCCCCGACCGCCGGC
ACCTGGAAAATGTTATCAGGGCCATTAAAGAACGTACCGGTATAACCGAGCTCCTGGAACTCCCGGCCGAACGCCCCTTT
AAGATTCGCGTCAATTTTGACCTGGAGGCTGAGGATTAA

Upstream 100 bases:

>100_bases
ATCAGTTATCTCGCCGGGAAGGGGTGTTATCCCTTTATGGCCGGCCCGGTCCGGGTCCGGATAAAATCCTGCCCCGGATA
TTTCCTAAAAGGATTTTTTA

Downstream 100 bases:

>100_bases
AAATGCCGCGCCAGCTCTCTGAAGTGGAAAAAAATATTGTCCGCATCTTCCAGGGAGACCTGCCCCTGGAGCCCTACCCC
TTCCGCCGGGCGGCCCGGGA

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MLVANKPSIIRSIIICGGILLDQLDRRLLNLIQEEFPLVARPYQEIGCRLGLSEDEVIRKIRKLKTEGIIRRLGGVFELR
QLGYTSTLCALKVPPGRLEEVAAVVNSFPGVTHNYLREHDYNMWFTLIGPDRRHLENVIRAIKERTGITELLELPAERPF
KIRVNFDLEAED

Sequences:

>Translated_172_residues
MLVANKPSIIRSIIICGGILLDQLDRRLLNLIQEEFPLVARPYQEIGCRLGLSEDEVIRKIRKLKTEGIIRRLGGVFELR
QLGYTSTLCALKVPPGRLEEVAAVVNSFPGVTHNYLREHDYNMWFTLIGPDRRHLENVIRAIKERTGITELLELPAERPF
KIRVNFDLEAED
>Mature_172_residues
MLVANKPSIIRSIIICGGILLDQLDRRLLNLIQEEFPLVARPYQEIGCRLGLSEDEVIRKIRKLKTEGIIRRLGGVFELR
QLGYTSTLCALKVPPGRLEEVAAVVNSFPGVTHNYLREHDYNMWFTLIGPDRRHLENVIRAIKERTGITELLELPAERPF
KIRVNFDLEAED

Specific function: Required for the biosynthesis of heme D1 of nitrite reductase [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19744; Mature: 19744

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVANKPSIIRSIIICGGILLDQLDRRLLNLIQEEFPLVARPYQEIGCRLGLSEDEVIRK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHH
IRKLKTEGIIRRLGGVFELRQLGYTSTLCALKVPPGRLEEVAAVVNSFPGVTHNYLREHD
HHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHCC
YNMWFTLIGPDRRHLENVIRAIKERTGITELLELPAERPFKIRVNFDLEAED
CCEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEEECCCCC
>Mature Secondary Structure
MLVANKPSIIRSIIICGGILLDQLDRRLLNLIQEEFPLVARPYQEIGCRLGLSEDEVIRK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHH
IRKLKTEGIIRRLGGVFELRQLGYTSTLCALKVPPGRLEEVAAVVNSFPGVTHNYLREHD
HHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHCC
YNMWFTLIGPDRRHLENVIRAIKERTGITELLELPAERPFKIRVNFDLEAED
CCEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7588711 [H]