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The map label for this gene is yjfH [C]

Identifier: 83590588

GI number: 83590588

Start: 1808048

End: 1808866

Strand: Reverse

Name: yjfH [C]

Synonym: Moth_1753

Alternate gene names: 83590588

Gene position: 1808866-1808048 (Counterclockwise)

Preceding gene: 83590589

Following gene: 83590587

Centisome position: 68.81

GC content: 62.15

Gene sequence:

>819_bases
ATGGCCTTAATTACATCTCCAAACAACCGCTACGTAAAGCTGGCCCGATCCCTTCAGGACCGCTCCTGGCGGGAAAAGAA
GGGCCTTTATCTCATCGAGGGTATCCACCTGCTGGAAGAAGCCCTGCAGGCCGGCACGTCCCTGGAAGTGGTTTTACATA
GTCCCCGCATTTTTACTACATCCCGGGGCGAAAAACTGGTAGCCGGCCTGCAAAGGGCCGGCTACCAGTGCCTGGCGGTA
ACGGAGGAGCTCATGGCCGGCATCAGCACCACCATGACGCCGCCGGGAATTGTGGCCGTGGCGCCAATGCAGGCAAAAAA
CCTTGCTGAGCTTCTGGCGGTGACGTCACCGCTCCATTCTCCTCCTTTATTTATAATCGCTGCCGGCATTCAGGACCCGG
GCAATCTGGGGACCATCTGGCGCACGGCCTTGGGAGCTGGGGCGACGGGCTTAATTCTAACTCGTGGCTGCGTAGACCCC
TATAACCCCAAGGTGGTCCGGTCGGCCATGGGGGCGACCTTCCGGCTGCCGGTGGCCGGCGGCGTAGAGCCCGCCCTGCT
GGCCCGGAAACTTCAGGATGCCGGGCTGAAACTGGTAGTAGCCGACGTGGGTGCGCCCTTAACCCTCTGGCAGGTAGACC
TGCGCCCGCCCCTGGCTTTGATAGTGGGCAGCGAGAACCACGGGCCCGGACCGGAATTGCTGGCTGCGGCTACCGAGCGG
GTGGGCATCCCCTTGGTGGGACCAGTTGATTCCCTAAACGCCGCCGTGGCCGCGGCCCTCCTTCTCTATGAAGCCCTACG
CCAGCGGCAGGGGGTATAA

Upstream 100 bases:

>100_bases
GGCTGCCGGTCATGGTTCACGTTAGAGCTATTCTTTAAGGGGGATTTCAAAGATTACCGATCCGAATGAAAATGGCAACT
AATCTGCGGAGAGAAAGCAG

Downstream 100 bases:

>100_bases
CCTCCTGGGGTAAATCCAGGAAAAGGCCGTTGCTTTCAGGAAAACTTTGGGCTAGAATGGAGGTAAAGGCAGGTGAGCGC
CATGCCGGAGGAGAGCTTGC

Product: tRNA/rRNA methyltransferase (SpoU)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MALITSPNNRYVKLARSLQDRSWREKKGLYLIEGIHLLEEALQAGTSLEVVLHSPRIFTTSRGEKLVAGLQRAGYQCLAV
TEELMAGISTTMTPPGIVAVAPMQAKNLAELLAVTSPLHSPPLFIIAAGIQDPGNLGTIWRTALGAGATGLILTRGCVDP
YNPKVVRSAMGATFRLPVAGGVEPALLARKLQDAGLKLVVADVGAPLTLWQVDLRPPLALIVGSENHGPGPELLAAATER
VGIPLVGPVDSLNAAVAAALLLYEALRQRQGV

Sequences:

>Translated_272_residues
MALITSPNNRYVKLARSLQDRSWREKKGLYLIEGIHLLEEALQAGTSLEVVLHSPRIFTTSRGEKLVAGLQRAGYQCLAV
TEELMAGISTTMTPPGIVAVAPMQAKNLAELLAVTSPLHSPPLFIIAAGIQDPGNLGTIWRTALGAGATGLILTRGCVDP
YNPKVVRSAMGATFRLPVAGGVEPALLARKLQDAGLKLVVADVGAPLTLWQVDLRPPLALIVGSENHGPGPELLAAATER
VGIPLVGPVDSLNAAVAAALLLYEALRQRQGV
>Mature_271_residues
ALITSPNNRYVKLARSLQDRSWREKKGLYLIEGIHLLEEALQAGTSLEVVLHSPRIFTTSRGEKLVAGLQRAGYQCLAVT
EELMAGISTTMTPPGIVAVAPMQAKNLAELLAVTSPLHSPPLFIIAAGIQDPGNLGTIWRTALGAGATGLILTRGCVDPY
NPKVVRSAMGATFRLPVAGGVEPALLARKLQDAGLKLVVADVGAPLTLWQVDLRPPLALIVGSENHGPGPELLAAATERV
GIPLVGPVDSLNAAVAAALLLYEALRQRQGV

Specific function: Unknown

COG id: COG0566

COG function: function code J; rRNA methylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Homo sapiens, GI8922534, Length=308, Percent_Identity=31.8181818181818, Blast_Score=122, Evalue=5e-28,
Organism=Escherichia coli, GI1790623, Length=208, Percent_Identity=29.8076923076923, Blast_Score=76, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24666840, Length=274, Percent_Identity=29.1970802919708, Blast_Score=102, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001537
- InterPro:   IPR013123 [H]

Pfam domain/function: PF00588 SpoU_methylase; PF08032 SpoU_sub_bind [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 28614; Mature: 28483

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALITSPNNRYVKLARSLQDRSWREKKGLYLIEGIHLLEEALQAGTSLEVVLHSPRIFTT
CEEEECCCCHHHHHHHHHHHCCHHHHCCEEEEHHHHHHHHHHHCCCEEEEEEECCEEEEC
SRGEKLVAGLQRAGYQCLAVTEELMAGISTTMTPPGIVAVAPMQAKNLAELLAVTSPLHS
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCC
PPLFIIAAGIQDPGNLGTIWRTALGAGATGLILTRGCVDPYNPKVVRSAMGATFRLPVAG
CCEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCEEEECCCC
GVEPALLARKLQDAGLKLVVADVGAPLTLWQVDLRPPLALIVGSENHGPGPELLAAATER
CCCHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHH
VGIPLVGPVDSLNAAVAAALLLYEALRQRQGV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALITSPNNRYVKLARSLQDRSWREKKGLYLIEGIHLLEEALQAGTSLEVVLHSPRIFTT
EEEECCCCHHHHHHHHHHHCCHHHHCCEEEEHHHHHHHHHHHCCCEEEEEEECCEEEEC
SRGEKLVAGLQRAGYQCLAVTEELMAGISTTMTPPGIVAVAPMQAKNLAELLAVTSPLHS
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCC
PPLFIIAAGIQDPGNLGTIWRTALGAGATGLILTRGCVDPYNPKVVRSAMGATFRLPVAG
CCEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCEEEECCCC
GVEPALLARKLQDAGLKLVVADVGAPLTLWQVDLRPPLALIVGSENHGPGPELLAAATER
CCCHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHH
VGIPLVGPVDSLNAAVAAALLLYEALRQRQGV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]