Click here to switch to the map view.

The map label for this gene is yrvM [H]

Identifier: 83590511

GI number: 83590511

Start: 1711232

End: 1711960

Strand: Reverse

Name: yrvM [H]

Synonym: Moth_1675

Alternate gene names: 83590511

Gene position: 1711960-1711232 (Counterclockwise)

Preceding gene: 83590512

Following gene: 83590510

Centisome position: 65.12

GC content: 67.22

Gene sequence:

>729_bases
GTGGAGAGTTTCTGGACCCGCACGGAAATGCTCATCGGTGCTGCAGGCCGAAAACGCCTGGCCGCAGCGCGGGTGGCGGT
TATCGGTACCGGCGGCGTCGGCTCCTTTGCCGTAGAAGGCCTGGCCCGGGCGGGGGTCGGTTACCTGGAACTGGTAGACC
CGGACGTAGTCAAACCCAGCAACCTCAACCGCCAGCTCCCGGCCCTGGGTTCCACCCTGGGACAACCCAAGGTCGCCGTC
CTGGCGGCCCGCTGCCGCGATATTAACCCGGAAGCGACCATTATCCCCCGGCAGGAAGCCTACAGCCCGGCCACGAGCTT
AAAGTTTGTCCGGCCGGACCTGGACTTCCTGGTGGACGCCATCGACAGCGTGAAGGCCAAGATCGACCTCCTGGCCACGG
CCGTCACGGCCGGCCGGCCCATAGTCAGCAGTATGGGCGCTGGTAACCGCCTGGATCCCACCCTGCTGCGGGTAGCCGAC
ATCAGCGCCACCCGGGGTTGTCCTCTGGCCCGGGCTGTCCGGCGGGGCCTCCGGGCCCGGGGGATCGCCGGGGGCCTGAC
GGTGGTATACTCGGAAGAGCCACCCCTAGAGGTCCGGACGAAACCGCAACTGGCACCGGGGGAGCGACAACCCCCGGGCA
GTATGATCTTCGTTCCGGCGGTGGCCGGCCTGATCCTGGCCAACCTGGTGGTGAGGGCCCTCCTGCAGGGTGACAGTTAC
AGTAAGTAG

Upstream 100 bases:

>100_bases
GAAGCAAAAAGTGTCCGTGGAGGTACCCACCTGCTGAGAGCAGGTTCAAAAACCACGGCATTCACGGCATTTGTGGGGTT
TTATTTTTTGAGGTGCAACT

Downstream 100 bases:

>100_bases
TTGCCTGTGCCGGGAAAATCCATTATACTGGACAGGGGTACAAACCCCGGGAAAGGGGGTAGAAAAGATTGAGCAGGAGA
CCCGGCGAAGAAAGCTCCTA

Product: UBA/THIF-type NAD/FAD binding fold

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MESFWTRTEMLIGAAGRKRLAAARVAVIGTGGVGSFAVEGLARAGVGYLELVDPDVVKPSNLNRQLPALGSTLGQPKVAV
LAARCRDINPEATIIPRQEAYSPATSLKFVRPDLDFLVDAIDSVKAKIDLLATAVTAGRPIVSSMGAGNRLDPTLLRVAD
ISATRGCPLARAVRRGLRARGIAGGLTVVYSEEPPLEVRTKPQLAPGERQPPGSMIFVPAVAGLILANLVVRALLQGDSY
SK

Sequences:

>Translated_242_residues
MESFWTRTEMLIGAAGRKRLAAARVAVIGTGGVGSFAVEGLARAGVGYLELVDPDVVKPSNLNRQLPALGSTLGQPKVAV
LAARCRDINPEATIIPRQEAYSPATSLKFVRPDLDFLVDAIDSVKAKIDLLATAVTAGRPIVSSMGAGNRLDPTLLRVAD
ISATRGCPLARAVRRGLRARGIAGGLTVVYSEEPPLEVRTKPQLAPGERQPPGSMIFVPAVAGLILANLVVRALLQGDSY
SK
>Mature_242_residues
MESFWTRTEMLIGAAGRKRLAAARVAVIGTGGVGSFAVEGLARAGVGYLELVDPDVVKPSNLNRQLPALGSTLGQPKVAV
LAARCRDINPEATIIPRQEAYSPATSLKFVRPDLDFLVDAIDSVKAKIDLLATAVTAGRPIVSSMGAGNRLDPTLLRVAD
ISATRGCPLARAVRRGLRARGIAGGLTVVYSEEPPLEVRTKPQLAPGERQPPGSMIFVPAVAGLILANLVVRALLQGDSY
SK

Specific function: Unknown

COG id: COG1179

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Homo sapiens, GI7657339, Length=133, Percent_Identity=40.6015037593985, Blast_Score=82, Evalue=3e-16,
Organism=Escherichia coli, GI1789177, Length=172, Percent_Identity=37.7906976744186, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1787048, Length=160, Percent_Identity=34.375, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI87082356, Length=142, Percent_Identity=31.6901408450704, Blast_Score=64, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6321790, Length=190, Percent_Identity=34.2105263157895, Blast_Score=128, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6322825, Length=158, Percent_Identity=40.5063291139241, Blast_Score=111, Evalue=8e-26,
Organism=Saccharomyces cerevisiae, GI6321903, Length=155, Percent_Identity=29.6774193548387, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 25426; Mature: 25426

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESFWTRTEMLIGAAGRKRLAAARVAVIGTGGVGSFAVEGLARAGVGYLELVDPDVVKPS
CCCHHHHHHHHHHHCCHHHHHHEEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCCC
NLNRQLPALGSTLGQPKVAVLAARCRDINPEATIIPRQEAYSPATSLKFVRPDLDFLVDA
CCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCEEEECHHHCCCHHCEEEECCCHHHHHHH
IDSVKAKIDLLATAVTAGRPIVSSMGAGNRLDPTLLRVADISATRGCPLARAVRRGLRAR
HHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHEEECCCCCCCCHHHHHHHHHHHHC
GIAGGLTVVYSEEPPLEVRTKPQLAPGERQPPGSMIFVPAVAGLILANLVVRALLQGDSY
CCCCCEEEEECCCCCCEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCC
SK
CC
>Mature Secondary Structure
MESFWTRTEMLIGAAGRKRLAAARVAVIGTGGVGSFAVEGLARAGVGYLELVDPDVVKPS
CCCHHHHHHHHHHHCCHHHHHHEEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCCC
NLNRQLPALGSTLGQPKVAVLAARCRDINPEATIIPRQEAYSPATSLKFVRPDLDFLVDA
CCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCEEEECHHHCCCHHCEEEECCCHHHHHHH
IDSVKAKIDLLATAVTAGRPIVSSMGAGNRLDPTLLRVADISATRGCPLARAVRRGLRAR
HHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHEEECCCCCCCCHHHHHHHHHHHHC
GIAGGLTVVYSEEPPLEVRTKPQLAPGERQPPGSMIFVPAVAGLILANLVVRALLQGDSY
CCCCCEEEEECCCCCCEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCC
SK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]