Click here to switch to the map view.

The map label for this gene is 83590234

Identifier: 83590234

GI number: 83590234

Start: 1434438

End: 1435763

Strand: Reverse

Name: 83590234

Synonym: Moth_1387

Alternate gene names: NA

Gene position: 1435763-1434438 (Counterclockwise)

Preceding gene: 83590235

Following gene: 83590233

Centisome position: 54.62

GC content: 52.26

Gene sequence:

>1326_bases
GTGCTTATCGAGATCAGCAGGGAGACGCTGGCGGGCATCAGAAACCCCGACCTGGCGAAGTACGCGGGGATGTACACGAG
GATCTACGAGGATTTTATGCGGCAAATCCAGGGGAGTGGCATAGCGGTCGCCCGGGAGGATTACCGGGAAGAGACACGGC
AGCGAATAGAGGGTTTGCGCCGGCAGGGCGTCGTAGTCCGCAACGACGCCAAGAGCCTGTATATCAACGGTATTTCCCCG
GCGTGCCTGGCCTGCCAGAAGGGCGTGGGGAGCCTGACCTTTTTCATCTCCCTTCAGTGCCACCGTCACTGCTTTTTCTG
TTTTAACCCGAACCAGGAAGGCTACGAGTATTACACCCATAATCAGAGGGATTGCCTGGCAGAATTGGAGTATCTCCAAA
GAACCGGCCAGGAAATGAAACACGTGGCTCTGACGGGGGGCGAACCTCTCCTTCATCCAGAAGAAACCCTGGCTTTTTTC
CGCGCCGCCAAAGAAAAATTTCCCGGCGTTTATACCCGCCTCTATACGGCCGGTGATCTGGCCGGCAAAGAGATGCTGGC
GGAATTGCAAAGAACTGGCCTGGACGAGATACGCTTCAGCATCAGGCTGCATGACCCGGAAGGGGTGCGGCGGCGCACCT
ACGAGCATATTGCCTTAGCCAGGGAGTATATTCCCCGGGTGATGGTGGAAATGCCCGTCCTGCCCGGTACCAGGAAACCT
ATGCAGGAAGTATTACTGGAACTGGATCGCCTAGGCATTTTTGGCATAAATTTGCTGGAGTTCTGCTTTCCTTTCAATAA
TGTGGATATATATAACGAAAGGGGGTATAAAATCAAGAATCCACCCTATCGGGTGCTTTACAATTACTGGTACGGCGGGG
GCCTGCCGGTAGCCGGGAGCGAGCTGGATTGCCTGGAGCTGATAGACTTTGCCCTGGAGAAGGGGTTGCAGCTGGGCATT
CACTATTGCTCCCTGGAAAATAAAAATACCGGCCAGATTTACCAGCAAAACTACGGGCAGAAAGTAGATGCCTTCCTGTA
TTTCTCACCACGGGATTACTTCTACAAATCGGCCAAGGTATTTGGAGACGACATTCCCCGGGTGCTGGAAGTATTTAAGA
AAATTAATTACCACCAGTATACCCTCAATAAGCAATACCATTTCCTTGAATTTCATATCAGCAAGGTTAAAGAGCTGGCG
GGACTCGACATTGAGGTGGGAATTTCGACCAGCGTAATGGAGAAACGCCAGGATGGTAGCTACCTGCGGAAATTGAAGGT
CGAACTGACGCGCCCGGAAATATTTGATGCGGAAACCGATATTTGA

Upstream 100 bases:

>100_bases
CCTCGATAACCATTCAACCGGCAGATGAGGCCAGGAAATAAGCTAGGCCGCAATTTTATCAACCCCAGGGTTCCGGTAGC
CATCAGTAGGGGGTACGCCT

Downstream 100 bases:

>100_bases
CTTTAAGGACCGGACAGGCGGCTCCTCTCCGGTTGGACAGAAGGGGGGTGAAATTTTGGTGCCCAGGCCAAAGGGAAAGA
AGCGTGGCTGAAAGAATATA

Product: radical SAM family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MLIEISRETLAGIRNPDLAKYAGMYTRIYEDFMRQIQGSGIAVAREDYREETRQRIEGLRRQGVVVRNDAKSLYINGISP
ACLACQKGVGSLTFFISLQCHRHCFFCFNPNQEGYEYYTHNQRDCLAELEYLQRTGQEMKHVALTGGEPLLHPEETLAFF
RAAKEKFPGVYTRLYTAGDLAGKEMLAELQRTGLDEIRFSIRLHDPEGVRRRTYEHIALAREYIPRVMVEMPVLPGTRKP
MQEVLLELDRLGIFGINLLEFCFPFNNVDIYNERGYKIKNPPYRVLYNYWYGGGLPVAGSELDCLELIDFALEKGLQLGI
HYCSLENKNTGQIYQQNYGQKVDAFLYFSPRDYFYKSAKVFGDDIPRVLEVFKKINYHQYTLNKQYHFLEFHISKVKELA
GLDIEVGISTSVMEKRQDGSYLRKLKVELTRPEIFDAETDI

Sequences:

>Translated_441_residues
MLIEISRETLAGIRNPDLAKYAGMYTRIYEDFMRQIQGSGIAVAREDYREETRQRIEGLRRQGVVVRNDAKSLYINGISP
ACLACQKGVGSLTFFISLQCHRHCFFCFNPNQEGYEYYTHNQRDCLAELEYLQRTGQEMKHVALTGGEPLLHPEETLAFF
RAAKEKFPGVYTRLYTAGDLAGKEMLAELQRTGLDEIRFSIRLHDPEGVRRRTYEHIALAREYIPRVMVEMPVLPGTRKP
MQEVLLELDRLGIFGINLLEFCFPFNNVDIYNERGYKIKNPPYRVLYNYWYGGGLPVAGSELDCLELIDFALEKGLQLGI
HYCSLENKNTGQIYQQNYGQKVDAFLYFSPRDYFYKSAKVFGDDIPRVLEVFKKINYHQYTLNKQYHFLEFHISKVKELA
GLDIEVGISTSVMEKRQDGSYLRKLKVELTRPEIFDAETDI
>Mature_441_residues
MLIEISRETLAGIRNPDLAKYAGMYTRIYEDFMRQIQGSGIAVAREDYREETRQRIEGLRRQGVVVRNDAKSLYINGISP
ACLACQKGVGSLTFFISLQCHRHCFFCFNPNQEGYEYYTHNQRDCLAELEYLQRTGQEMKHVALTGGEPLLHPEETLAFF
RAAKEKFPGVYTRLYTAGDLAGKEMLAELQRTGLDEIRFSIRLHDPEGVRRRTYEHIALAREYIPRVMVEMPVLPGTRKP
MQEVLLELDRLGIFGINLLEFCFPFNNVDIYNERGYKIKNPPYRVLYNYWYGGGLPVAGSELDCLELIDFALEKGLQLGI
HYCSLENKNTGQIYQQNYGQKVDAFLYFSPRDYFYKSAKVFGDDIPRVLEVFKKINYHQYTLNKQYHFLEFHISKVKELA
GLDIEVGISTSVMEKRQDGSYLRKLKVELTRPEIFDAETDI

Specific function: Unknown

COG id: COG2108

COG function: function code R; Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the organic radical-activating enzymes family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR001989
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 51168; Mature: 51168

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIEISRETLAGIRNPDLAKYAGMYTRIYEDFMRQIQGSGIAVAREDYREETRQRIEGLR
CEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH
RQGVVVRNDAKSLYINGISPACLACQKGVGSLTFFISLQCHRHCFFCFNPNQEGYEYYTH
HCCEEEEECCCEEEEECCCHHHHHHHCCCCCEEEEEEEEECCEEEEEECCCCCCCCCCCC
NQRDCLAELEYLQRTGQEMKHVALTGGEPLLHPEETLAFFRAAKEKFPGVYTRLYTAGDL
CHHHHHHHHHHHHHCCHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AGKEMLAELQRTGLDEIRFSIRLHDPEGVRRRTYEHIALAREYIPRVMVEMPVLPGTRKP
HHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
MQEVLLELDRLGIFGINLLEFCFPFNNVDIYNERGYKIKNPPYRVLYNYWYGGGLPVAGS
HHHHHHHHHHCCHHHHHHHHHHCCCCCCEEECCCCCEECCCCCEEEEEEECCCCCCCCCC
ELDCLELIDFALEKGLQLGIHYCSLENKNTGQIYQQNYGQKVDAFLYFSPRDYFYKSAKV
CCHHHHHHHHHHHCCHHEEEEEEECCCCCCCHHHHHCCCCCEEEEEEECCHHHHHHHHHH
FGDDIPRVLEVFKKINYHQYTLNKQYHFLEFHISKVKELAGLDIEVGISTSVMEKRQDGS
HCCCHHHHHHHHHHCCCEEEEECCCEEHHHHHHHHHHHHHCCCEEECCCHHHHHHHCCCH
YLRKLKVELTRPEIFDAETDI
HHHHHHHEECCCCCCCCCCCC
>Mature Secondary Structure
MLIEISRETLAGIRNPDLAKYAGMYTRIYEDFMRQIQGSGIAVAREDYREETRQRIEGLR
CEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH
RQGVVVRNDAKSLYINGISPACLACQKGVGSLTFFISLQCHRHCFFCFNPNQEGYEYYTH
HCCEEEEECCCEEEEECCCHHHHHHHCCCCCEEEEEEEEECCEEEEEECCCCCCCCCCCC
NQRDCLAELEYLQRTGQEMKHVALTGGEPLLHPEETLAFFRAAKEKFPGVYTRLYTAGDL
CHHHHHHHHHHHHHCCHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AGKEMLAELQRTGLDEIRFSIRLHDPEGVRRRTYEHIALAREYIPRVMVEMPVLPGTRKP
HHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
MQEVLLELDRLGIFGINLLEFCFPFNNVDIYNERGYKIKNPPYRVLYNYWYGGGLPVAGS
HHHHHHHHHHCCHHHHHHHHHHCCCCCCEEECCCCCEECCCCCEEEEEEECCCCCCCCCC
ELDCLELIDFALEKGLQLGIHYCSLENKNTGQIYQQNYGQKVDAFLYFSPRDYFYKSAKV
CCHHHHHHHHHHHCCHHEEEEEEECCCCCCCHHHHHCCCCCEEEEEEECCHHHHHHHHHH
FGDDIPRVLEVFKKINYHQYTLNKQYHFLEFHISKVKELAGLDIEVGISTSVMEKRQDGS
HCCCHHHHHHHHHHCCCEEEEECCCEEHHHHHHHHHHHHHCCCEEECCCHHHHHHHCCCH
YLRKLKVELTRPEIFDAETDI
HHHHHHHEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]