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The map label for this gene is ynfI [C]

Identifier: 83590226

GI number: 83590226

Start: 1424431

End: 1425111

Strand: Reverse

Name: ynfI [C]

Synonym: Moth_1379

Alternate gene names: 83590226

Gene position: 1425111-1424431 (Counterclockwise)

Preceding gene: 83590227

Following gene: 83590225

Centisome position: 54.21

GC content: 60.35

Gene sequence:

>681_bases
ATGGAAAAGGAATTATTAGCAGAATGGCACCAGGGGCGGGAGCTGGTTTATAGTTTCCTTGCCAGAATTTACCAGGAGGG
GCCGGCCCGGGATTTGCTGGCAGCCCTGGTCGGGGAAGAATTTCTGGTCGAATTAGCAGCCAGCAGCCAGAATGAAGACC
TGATCACTGGGTGCCGGCAGATGCAGGCTGAACTGGAAGCCCGCCGGCAGGACCTGGAGGCTTACCGGCAGGAACTCCAG
GGAGACTATAACCGCCTCTTTGTCGGCCCGGGCCATTTGGAAGCGCCGCCCTGGGAGTCGGTTTACCGCTCCAAGGAACA
CCTCCTCTTCGGCGAGGAAACCCTGGCTGTGAGGGAGTTTTACCGTTCGTTTGGCCTGGAGAGTAGAAAGAAGAACCAGG
AGCCAGACGACCACCTGGGACTGGAGCTGGAGTTTATGGCCCGGCTCTGTCGGGAAGCAGCCGCCAGCATTCAGTCCGGC
GGGGATGCCGACCGTTTCCTCGCCGGACAGGGGCGCTTTTTAGAGGAACACCTGGAGCAGTGGGTGCCGGCCCTGACCGC
CGATATCCAGCGGGCCGCCCGTACAGATTTCTTCCGCGGCCTGGCGCTGTTCACCCGGGGCTGGCTGGCGGAAGACAGGG
TCGAAGTAGAGATGGTACTGGAAGAACGGCAAAAAGGCTAG

Upstream 100 bases:

>100_bases
GATGTCCAGGTTAACCTGTATACCGCCCTCCAGGTTAAGGTAATGCTCGGCCGGTAAAGTAGGCTGGCAGGGATATCTAC
ATTTCCGGAAAGGAGATATT

Downstream 100 bases:

>100_bases
AAAGGTTAAAGGTGGGGAAACATGATTAACGATGAACGGGCGATCATAACTGTGCTGGGGCGCGATCGCGTAGGCATCCT
GGCCGGTATTACCGCCGTCC

Product: cytoplasmic chaperone TorD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MEKELLAEWHQGRELVYSFLARIYQEGPARDLLAALVGEEFLVELAASSQNEDLITGCRQMQAELEARRQDLEAYRQELQ
GDYNRLFVGPGHLEAPPWESVYRSKEHLLFGEETLAVREFYRSFGLESRKKNQEPDDHLGLELEFMARLCREAAASIQSG
GDADRFLAGQGRFLEEHLEQWVPALTADIQRAARTDFFRGLALFTRGWLAEDRVEVEMVLEERQKG

Sequences:

>Translated_226_residues
MEKELLAEWHQGRELVYSFLARIYQEGPARDLLAALVGEEFLVELAASSQNEDLITGCRQMQAELEARRQDLEAYRQELQ
GDYNRLFVGPGHLEAPPWESVYRSKEHLLFGEETLAVREFYRSFGLESRKKNQEPDDHLGLELEFMARLCREAAASIQSG
GDADRFLAGQGRFLEEHLEQWVPALTADIQRAARTDFFRGLALFTRGWLAEDRVEVEMVLEERQKG
>Mature_226_residues
MEKELLAEWHQGRELVYSFLARIYQEGPARDLLAALVGEEFLVELAASSQNEDLITGCRQMQAELEARRQDLEAYRQELQ
GDYNRLFVGPGHLEAPPWESVYRSKEHLLFGEETLAVREFYRSFGLESRKKNQEPDDHLGLELEFMARLCREAAASIQSG
GDADRFLAGQGRFLEEHLEQWVPALTADIQRAARTDFFRGLALFTRGWLAEDRVEVEMVLEERQKG

Specific function: Unknown

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the torD/dmsD family. DmsD subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081942, Length=98, Percent_Identity=36.734693877551, Blast_Score=67, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020945 [H]

Pfam domain/function: PF02613 Nitrate_red_del [H]

EC number: NA

Molecular weight: Translated: 26036; Mature: 26036

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKELLAEWHQGRELVYSFLARIYQEGPARDLLAALVGEEFLVELAASSQNEDLITGCRQ
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
MQAELEARRQDLEAYRQELQGDYNRLFVGPGHLEAPPWESVYRSKEHLLFGEETLAVREF
HHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCCHHHHHCCHHHHHCCHHHHHHHHH
YRSFGLESRKKNQEPDDHLGLELEFMARLCREAAASIQSGGDADRFLAGQGRFLEEHLEQ
HHHHCCCHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHH
WVPALTADIQRAARTDFFRGLALFTRGWLAEDRVEVEMVLEERQKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEKELLAEWHQGRELVYSFLARIYQEGPARDLLAALVGEEFLVELAASSQNEDLITGCRQ
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
MQAELEARRQDLEAYRQELQGDYNRLFVGPGHLEAPPWESVYRSKEHLLFGEETLAVREF
HHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCCHHHHHCCHHHHHCCHHHHHHHHH
YRSFGLESRKKNQEPDDHLGLELEFMARLCREAAASIQSGGDADRFLAGQGRFLEEHLEQ
HHHHCCCHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHH
WVPALTADIQRAARTDFFRGLALFTRGWLAEDRVEVEMVLEERQKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]