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The map label for this gene is fni

Identifier: 83590175

GI number: 83590175

Start: 1373127

End: 1374167

Strand: Reverse

Name: fni

Synonym: Moth_1328

Alternate gene names: 83590175

Gene position: 1374167-1373127 (Counterclockwise)

Preceding gene: 83590176

Following gene: 83590174

Centisome position: 52.27

GC content: 60.61

Gene sequence:

>1041_bases
TTGAACGAGAGAGAATATATAGGTAGGGGCCGGCGCAAGCTGGAGCACCTGCGTTTTTTCCAGGAAGATAGTAAGGGCAG
CAATGGCCTGGAGGACGTGCACCTGGTTCATCAGGCCCTGCCCGAACTTAACTGGTCGGATATCGATCTTACCTGCCGGT
GGCTGGGGAAAACCCTGGCCGCCCCTTTTATTATTAATGCCCTGACCGGCGGACCTCCGGAGACTCTGGCCATTAACGCC
GCCCTGGCGCGGGTGGCCAGGCGGACGGGGATTGCCCTGGCCGTAGGCTCCCAGCGGGCGGGCCTTGAGAATAAAGAATG
GCGGGAGAGCTTCACCATTGTCCGCCGGGAGAATGCTAACGGGTTAATCCTGGCCAATATTGGTGCCGGGAACTCGCCGG
CGGACGCCGGGGAGGCCGTGGCCATGATTGCCGCTGACGGCCTGCAGGTACACCTCAATGCCGCCCAGGAATTGATAATG
CCGGAGGGTGATCGTGCTTTCCGGGGCTGGTTGGAGAACATCAGGGGGATGGTAAACACCCTGGGTGTACCTGTTATCGC
CAAAGAAGTGGGCTTTGGCCTCTCTCGGGAAACAGCCTTGCAACTATACCAGGCCGGGGTTCGTATTATGGACGTCGGTG
GCCGGGGCGGGACCAACTTTGCGGCTATTGAGGAAAGGCGCCGGGGCCGGTCGGTCGCGGCCCTGGCTGGATGGGGCCTG
TCAACGGCGGTTAGCATTCTGGAAATAAGGGAACTGGGCCTTCCAGTGGAGGTGGTAGCCACCGGTGGCATCCGCAGCGC
CCTGGACGCCGCCAGGGCCCTGGCCCTGGGGGCAAAAATTGTAGGGGCGGCTGGGTACTTCCTGAAAATCCTCCTGGAAC
AGGGTGAAGATGCCCTTACGGAAGAGATCCTGCAGTGGCAGGAGGATTTAAAACGCATCTGCTTGCTCACCGGCTGCACC
ACCCCGGCTGAACTGGCTACCAAACCGGTAGTTATTACTGGCCAGACCAGGGCCTGGCTGGAGGGTAGGCAACGCCATTA
G

Upstream 100 bases:

>100_bases
AACGAGAGCGGGGTTAAGTTAGGCGATCTCTTTGGCGATCTCTTTGAGGCGAATCAATCTACAAACCAATGACGCCACCT
GCGAAGGGCGGAAGCTTTCC

Downstream 100 bases:

>100_bases
CCCGGGCGATTATAAGCCCGGGTTTTCTATTGGCCCGGCATGGTTGGCGCCAGTAACCTTTCGGTATATTTTTATCCTGG
CGGGGAAATCTATCCTTGAA

Product: isopentenyl pyrophosphate isomerase

Products: NA

Alternate protein names: IPP isomerase; Isopentenyl pyrophosphate isomerase

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MNEREYIGRGRRKLEHLRFFQEDSKGSNGLEDVHLVHQALPELNWSDIDLTCRWLGKTLAAPFIINALTGGPPETLAINA
ALARVARRTGIALAVGSQRAGLENKEWRESFTIVRRENANGLILANIGAGNSPADAGEAVAMIAADGLQVHLNAAQELIM
PEGDRAFRGWLENIRGMVNTLGVPVIAKEVGFGLSRETALQLYQAGVRIMDVGGRGGTNFAAIEERRRGRSVAALAGWGL
STAVSILEIRELGLPVEVVATGGIRSALDAARALALGAKIVGAAGYFLKILLEQGEDALTEEILQWQEDLKRICLLTGCT
TPAELATKPVVITGQTRAWLEGRQRH

Sequences:

>Translated_346_residues
MNEREYIGRGRRKLEHLRFFQEDSKGSNGLEDVHLVHQALPELNWSDIDLTCRWLGKTLAAPFIINALTGGPPETLAINA
ALARVARRTGIALAVGSQRAGLENKEWRESFTIVRRENANGLILANIGAGNSPADAGEAVAMIAADGLQVHLNAAQELIM
PEGDRAFRGWLENIRGMVNTLGVPVIAKEVGFGLSRETALQLYQAGVRIMDVGGRGGTNFAAIEERRRGRSVAALAGWGL
STAVSILEIRELGLPVEVVATGGIRSALDAARALALGAKIVGAAGYFLKILLEQGEDALTEEILQWQEDLKRICLLTGCT
TPAELATKPVVITGQTRAWLEGRQRH
>Mature_346_residues
MNEREYIGRGRRKLEHLRFFQEDSKGSNGLEDVHLVHQALPELNWSDIDLTCRWLGKTLAAPFIINALTGGPPETLAINA
ALARVARRTGIALAVGSQRAGLENKEWRESFTIVRRENANGLILANIGAGNSPADAGEAVAMIAADGLQVHLNAAQELIM
PEGDRAFRGWLENIRGMVNTLGVPVIAKEVGFGLSRETALQLYQAGVRIMDVGGRGGTNFAAIEERRRGRSVAALAGWGL
STAVSILEIRELGLPVEVVATGGIRSALDAARALALGAKIVGAAGYFLKILLEQGEDALTEEILQWQEDLKRICLLTGCT
TPAELATKPVVITGQTRAWLEGRQRH

Specific function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)

COG id: COG1304

COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IPP isomerase type 2 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): IDI2_MOOTA (Q2RIU8)

Other databases:

- EMBL:   CP000232
- RefSeq:   YP_430184.1
- ProteinModelPortal:   Q2RIU8
- SMR:   Q2RIU8
- STRING:   Q2RIU8
- GeneID:   3831038
- GenomeReviews:   CP000232_GR
- KEGG:   mta:Moth_1328
- NMPDR:   fig|264732.9.peg.1323
- eggNOG:   COG1304
- HOGENOM:   HBG354479
- OMA:   GSQRAAI
- ProtClustDB:   PRK05437
- BioCyc:   MTHE264732:MOTH_1328-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00354
- InterPro:   IPR013785
- InterPro:   IPR000262
- InterPro:   IPR011179
- Gene3D:   G3DSA:3.20.20.70
- PANTHER:   PTHR10578:SF3
- PIRSF:   PIRSF003314
- TIGRFAMs:   TIGR02151

Pfam domain/function: PF01070 FMN_dh

EC number: =5.3.3.2

Molecular weight: Translated: 37305; Mature: 37305

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEREYIGRGRRKLEHLRFFQEDSKGSNGLEDVHLVHQALPELNWSDIDLTCRWLGKTLA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
APFIINALTGGPPETLAINAALARVARRTGIALAVGSQRAGLENKEWRESFTIVRRENAN
HHHHHHHHCCCCCHHEEHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHEEEECCCC
GLILANIGAGNSPADAGEAVAMIAADGLQVHLNAAQELIMPEGDRAFRGWLENIRGMVNT
EEEEEECCCCCCCCCCCCEEEEEEECCEEEEECHHHHHHCCCCCHHHHHHHHHHHHHHHH
LGVPVIAKEVGFGLSRETALQLYQAGVRIMDVGGRGGTNFAAIEERRRGRSVAALAGWGL
CCCCHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCEEEHHCCCH
STAVSILEIRELGLPVEVVATGGIRSALDAARALALGAKIVGAAGYFLKILLEQGEDALT
HHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
EEILQWQEDLKRICLLTGCTTPAELATKPVVITGQTRAWLEGRQRH
HHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEECCCHHHHCCCCCC
>Mature Secondary Structure
MNEREYIGRGRRKLEHLRFFQEDSKGSNGLEDVHLVHQALPELNWSDIDLTCRWLGKTLA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
APFIINALTGGPPETLAINAALARVARRTGIALAVGSQRAGLENKEWRESFTIVRRENAN
HHHHHHHHCCCCCHHEEHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHEEEECCCC
GLILANIGAGNSPADAGEAVAMIAADGLQVHLNAAQELIMPEGDRAFRGWLENIRGMVNT
EEEEEECCCCCCCCCCCCEEEEEEECCEEEEECHHHHHHCCCCCHHHHHHHHHHHHHHHH
LGVPVIAKEVGFGLSRETALQLYQAGVRIMDVGGRGGTNFAAIEERRRGRSVAALAGWGL
CCCCHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCEEEHHCCCH
STAVSILEIRELGLPVEVVATGGIRSALDAARALALGAKIVGAAGYFLKILLEQGEDALT
HHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
EEILQWQEDLKRICLLTGCTTPAELATKPVVITGQTRAWLEGRQRH
HHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEECCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA