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The map label for this gene is vhuD [H]

Identifier: 83590041

GI number: 83590041

Start: 1224961

End: 1225419

Strand: Reverse

Name: vhuD [H]

Synonym: Moth_1193

Alternate gene names: 83590041

Gene position: 1225419-1224961 (Counterclockwise)

Preceding gene: 83590042

Following gene: 83590040

Centisome position: 46.62

GC content: 55.99

Gene sequence:

>459_bases
ATGGCCGACTTCGAGCCCAAAATCGTCGCCTTTTGTTGTTTCTACTGCGCCTATTCGGCCGCCGACCTGGCCGGGTCCAT
GCGTCTCCAATACCCGGCCAATATCCGGGTAATTGAGATGCCCTGTTCCGGTAAGACCGATATCCGGGTTTTACTGGAAG
CCTTTGAAGACGGGGCTGACGGGGTCTACGTCCTGGGTTGCATGGAAGGTGACTGCCACTTCTTAAAGGGCAACTTCCGA
GCCAAGCGACGTGTACGGCAGGCCAAGAAAATTCTGGACGAAATTGGTATCGGCGGCGAACGCCTGGAGATGTATAACCT
CTCGGCGGCCATGGGACCACGCTTTGCCGAGATTGCCCGGGAGTTTACCGACCGCATCCGGAAACTAGGTCCCAGCCCGG
TGAAATTAAAGCCCGGAGCAGCAACAGAAAAAACCCCCAGCCAAAAGGTCAACCCTTAA

Upstream 100 bases:

>100_bases
CTGCGCCGGTGAGTGCCCGGCCAAAGCCATCCAGTTGCAATTTTATAAAGATGACCAGCTGCTGGCCAAGGTAGCCGGCC
TCTTCGGGGAGGTGTAGGAA

Downstream 100 bases:

>100_bases
AGAAAGCAGGTGAATATGGATGATTATCGCCGAAGGCAAACCCCTGGTCGAAGTGGCCGGCTTGATTAAAGATGCTAAAA
AGGTCCTGGTGGTTGGCTGT

Product: methyl-viologen-reducing hydrogenase, delta subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MADFEPKIVAFCCFYCAYSAADLAGSMRLQYPANIRVIEMPCSGKTDIRVLLEAFEDGADGVYVLGCMEGDCHFLKGNFR
AKRRVRQAKKILDEIGIGGERLEMYNLSAAMGPRFAEIAREFTDRIRKLGPSPVKLKPGAATEKTPSQKVNP

Sequences:

>Translated_152_residues
MADFEPKIVAFCCFYCAYSAADLAGSMRLQYPANIRVIEMPCSGKTDIRVLLEAFEDGADGVYVLGCMEGDCHFLKGNFR
AKRRVRQAKKILDEIGIGGERLEMYNLSAAMGPRFAEIAREFTDRIRKLGPSPVKLKPGAATEKTPSQKVNP
>Mature_151_residues
ADFEPKIVAFCCFYCAYSAADLAGSMRLQYPANIRVIEMPCSGKTDIRVLLEAFEDGADGVYVLGCMEGDCHFLKGNFRA
KRRVRQAKKILDEIGIGGERLEMYNLSAAMGPRFAEIAREFTDRIRKLGPSPVKLKPGAATEKTPSQKVNP

Specific function: Unknown

COG id: COG1908

COG function: function code C; Coenzyme F420-reducing hydrogenase, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mvhD/vhuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003813 [H]

Pfam domain/function: PF02662 FlpD [H]

EC number: NA

Molecular weight: Translated: 16828; Mature: 16697

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADFEPKIVAFCCFYCAYSAADLAGSMRLQYPANIRVIEMPCSGKTDIRVLLEAFEDGAD
CCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCC
GVYVLGCMEGDCHFLKGNFRAKRRVRQAKKILDEIGIGGERLEMYNLSAAMGPRFAEIAR
CEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHCCHHHHHHH
EFTDRIRKLGPSPVKLKPGAATEKTPSQKVNP
HHHHHHHHCCCCCEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ADFEPKIVAFCCFYCAYSAADLAGSMRLQYPANIRVIEMPCSGKTDIRVLLEAFEDGAD
CCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCC
GVYVLGCMEGDCHFLKGNFRAKRRVRQAKKILDEIGIGGERLEMYNLSAAMGPRFAEIAR
CEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHCCHHHHHHH
EFTDRIRKLGPSPVKLKPGAATEKTPSQKVNP
HHHHHHHHCCCCCEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11401697 [H]