Click here to switch to the map view.

The map label for this gene is yfkQ [H]

Identifier: 83589862

GI number: 83589862

Start: 1042638

End: 1044239

Strand: Reverse

Name: yfkQ [H]

Synonym: Moth_1014

Alternate gene names: 83589862

Gene position: 1044239-1042638 (Counterclockwise)

Preceding gene: 83589863

Following gene: 83589861

Centisome position: 39.72

GC content: 49.38

Gene sequence:

>1602_bases
ATGCTGCGAAAATCCTGGTTTTATTTACGCAGAAAAAAGAAGGCCAGACCTAGCCCGGGGAAGGATCAATTGGCGTCTCC
CCTGGTAGATGAAGGTAAAGCTATCGCTCTTCCTTTCCAGCGTTCTTTAGAAGCCAACTTAAAAATCTTACAAGAAATTT
TTAGCGATTGCCAGGATGTCGTCTACCGCAGGATGAAAATCGGTGGTACAGGTGGATTGGCAGCTCTATTAGTTTATGTA
GATGGCCTGGTAGATAACGAGATTATCGATACCCAAATTGTCAAGTCTCTCTTGCTTGAAGCCCACCAGGCAACCCCTGC
CTTCACTCCAGATGGGAAGTTCTTCTACCAGGTGCGTGATTCCTTGTTAACAGTTGCCAATGTCCGGGAGATAGCCAATT
TCCGTGAAGCTGCCTTTTGTATTTTAAGTGGCTTTGCTCTCTTGATCCTGGAAGGCAGCAATAAAGGTTTGGCCCTGGAG
GTTTGCGGTTGGGAACACCGTGGGGTTGAAGAACCTCAAAACGAGGCGGTGATCCGTGGCCCCCGGGATGGTTTTTCCGA
GAGCTTCCGTACTAATACGGCGCTTTTACGGCGGCGCCTCCGCGATCCCCAGCTCAAGCTAAAGACCTATTTTCTAGGGC
GGCGCAGCCAGACTGCAGTGGGACTATTGTACTTGAAAGGTGTAGTTGATCCTGAGTTGGTGGCGGAAGTAGAGGGACGA
CTTAAAAATATTGATATTGACGGCATCCTGGATAGCGGTTTTATCGAACAGTTAATTGAGGACTGCTGGTACTCTCCTTT
TGCTCAAATCCAGAGTACAGAAAGACCTGACGAGGCGGCTGCCGCCCTCCTTGAAGGCAGGGTCATAGTCTTAACAGATA
ATACCCCTTTTGCCCTGCTCATTCCCGCTACCTTTAATTCCCTGATGCACAGCCCGGAGGACTTTTATCATCGCTGGTTG
ATTTCATTCCTTATCCGGAGCTTGCGTTTTTTGGGAACTGTCCTGGCGCTCATTCTCCCCTCCCTATATATTGCCATGGT
TTCCTTTTCTCCGGAAATGATACCCACTTCCCTGGCCATTTCTATAGGTGCCGGGCGGGAAGGGTTGCCTTTTCCCTCAA
TAGTAGAAGCTTTAATAATGGAGGTTGTCCTGGAGCTTCTCCGAGAAGCAGGGATCCGTTTACCCGGTCCTTTAGGCCAG
ACCCTGGGCGTAGTGGGAGCCCTGATCCTCGGCCAGGCGGCAGTTCAGGCCAACATCGTCAGTTCTGCCATGGTCATCGT
CGTAGCCTTGACAGCTATAAGTGGCTTTGTTGCCCCTAGATTTGATGCCGCCATAGCTTTACGGATTCTCCGTTTCTTTC
TTATGGTGATGGCGGCATTTTTAGGACTCTACGGCATCATACTTGGGCTGATGTTAATCCTGGCCCACCTGGCTTCCCTA
AAAAGTTTTGGTGTGCCCTACCTTCAACCATGGGCACCGTTACGGGTACCTGATCTTAAAGACAGTGTTTACCGTGCCGC
TTTTTTTAAACAACGCTGGCGCCCTTTCTACCTTAAACCACGTGAAGTCAAAAGAATTGGTGACAGGGTGAAGAAAAATT
GA

Upstream 100 bases:

>100_bases
AAAGGAAAGTTCATTAACGCTACATTATTTAAACCCGTTATTGACAGAACCCTAAAAGTTGCCGGGTTCTGTTAATTTTT
ATACCACTAGGGGTGTTCTA

Downstream 100 bases:

>100_bases
AGGCTACAGCCTTATTTTTAACGATTATTATTACTGCCGTGGTAACAACTGGATGCTGGGATAATCTGGATCTAGAACGA
CGTGCTCTGGTTCTGGGAGC

Product: GerA spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MLRKSWFYLRRKKKARPSPGKDQLASPLVDEGKAIALPFQRSLEANLKILQEIFSDCQDVVYRRMKIGGTGGLAALLVYV
DGLVDNEIIDTQIVKSLLLEAHQATPAFTPDGKFFYQVRDSLLTVANVREIANFREAAFCILSGFALLILEGSNKGLALE
VCGWEHRGVEEPQNEAVIRGPRDGFSESFRTNTALLRRRLRDPQLKLKTYFLGRRSQTAVGLLYLKGVVDPELVAEVEGR
LKNIDIDGILDSGFIEQLIEDCWYSPFAQIQSTERPDEAAAALLEGRVIVLTDNTPFALLIPATFNSLMHSPEDFYHRWL
ISFLIRSLRFLGTVLALILPSLYIAMVSFSPEMIPTSLAISIGAGREGLPFPSIVEALIMEVVLELLREAGIRLPGPLGQ
TLGVVGALILGQAAVQANIVSSAMVIVVALTAISGFVAPRFDAAIALRILRFFLMVMAAFLGLYGIILGLMLILAHLASL
KSFGVPYLQPWAPLRVPDLKDSVYRAAFFKQRWRPFYLKPREVKRIGDRVKKN

Sequences:

>Translated_533_residues
MLRKSWFYLRRKKKARPSPGKDQLASPLVDEGKAIALPFQRSLEANLKILQEIFSDCQDVVYRRMKIGGTGGLAALLVYV
DGLVDNEIIDTQIVKSLLLEAHQATPAFTPDGKFFYQVRDSLLTVANVREIANFREAAFCILSGFALLILEGSNKGLALE
VCGWEHRGVEEPQNEAVIRGPRDGFSESFRTNTALLRRRLRDPQLKLKTYFLGRRSQTAVGLLYLKGVVDPELVAEVEGR
LKNIDIDGILDSGFIEQLIEDCWYSPFAQIQSTERPDEAAAALLEGRVIVLTDNTPFALLIPATFNSLMHSPEDFYHRWL
ISFLIRSLRFLGTVLALILPSLYIAMVSFSPEMIPTSLAISIGAGREGLPFPSIVEALIMEVVLELLREAGIRLPGPLGQ
TLGVVGALILGQAAVQANIVSSAMVIVVALTAISGFVAPRFDAAIALRILRFFLMVMAAFLGLYGIILGLMLILAHLASL
KSFGVPYLQPWAPLRVPDLKDSVYRAAFFKQRWRPFYLKPREVKRIGDRVKKN
>Mature_533_residues
MLRKSWFYLRRKKKARPSPGKDQLASPLVDEGKAIALPFQRSLEANLKILQEIFSDCQDVVYRRMKIGGTGGLAALLVYV
DGLVDNEIIDTQIVKSLLLEAHQATPAFTPDGKFFYQVRDSLLTVANVREIANFREAAFCILSGFALLILEGSNKGLALE
VCGWEHRGVEEPQNEAVIRGPRDGFSESFRTNTALLRRRLRDPQLKLKTYFLGRRSQTAVGLLYLKGVVDPELVAEVEGR
LKNIDIDGILDSGFIEQLIEDCWYSPFAQIQSTERPDEAAAALLEGRVIVLTDNTPFALLIPATFNSLMHSPEDFYHRWL
ISFLIRSLRFLGTVLALILPSLYIAMVSFSPEMIPTSLAISIGAGREGLPFPSIVEALIMEVVLELLREAGIRLPGPLGQ
TLGVVGALILGQAAVQANIVSSAMVIVVALTAISGFVAPRFDAAIALRILRFFLMVMAAFLGLYGIILGLMLILAHLASL
KSFGVPYLQPWAPLRVPDLKDSVYRAAFFKQRWRPFYLKPREVKRIGDRVKKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 59210; Mature: 59210

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRKSWFYLRRKKKARPSPGKDQLASPLVDEGKAIALPFQRSLEANLKILQEIFSDCQDV
CCCCHHHHHHHHHCCCCCCCHHHHHCCHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHH
VYRRMKIGGTGGLAALLVYVDGLVDNEIIDTQIVKSLLLEAHQATPAFTPDGKFFYQVRD
HHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
SLLTVANVREIANFREAAFCILSGFALLILEGSNKGLALEVCGWEHRGVEEPQNEAVIRG
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEC
PRDGFSESFRTNTALLRRRLRDPQLKLKTYFLGRRSQTAVGLLYLKGVVDPELVAEVEGR
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHH
LKNIDIDGILDSGFIEQLIEDCWYSPFAQIQSTERPDEAAAALLEGRVIVLTDNTPFALL
HHCCCHHHCCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHCCCEEEEECCCCEEEE
IPATFNSLMHSPEDFYHRWLISFLIRSLRFLGTVLALILPSLYIAMVSFSPEMIPTSLAI
EHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEE
SIGAGREGLPFPSIVEALIMEVVLELLREAGIRLPGPLGQTLGVVGALILGQAAVQANIV
EECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SSAMVIVVALTAISGFVAPRFDAAIALRILRFFLMVMAAFLGLYGIILGLMLILAHLASL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSFGVPYLQPWAPLRVPDLKDSVYRAAFFKQRWRPFYLKPREVKRIGDRVKKN
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MLRKSWFYLRRKKKARPSPGKDQLASPLVDEGKAIALPFQRSLEANLKILQEIFSDCQDV
CCCCHHHHHHHHHCCCCCCCHHHHHCCHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHH
VYRRMKIGGTGGLAALLVYVDGLVDNEIIDTQIVKSLLLEAHQATPAFTPDGKFFYQVRD
HHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
SLLTVANVREIANFREAAFCILSGFALLILEGSNKGLALEVCGWEHRGVEEPQNEAVIRG
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEC
PRDGFSESFRTNTALLRRRLRDPQLKLKTYFLGRRSQTAVGLLYLKGVVDPELVAEVEGR
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHH
LKNIDIDGILDSGFIEQLIEDCWYSPFAQIQSTERPDEAAAALLEGRVIVLTDNTPFALL
HHCCCHHHCCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHCCCEEEEECCCCEEEE
IPATFNSLMHSPEDFYHRWLISFLIRSLRFLGTVLALILPSLYIAMVSFSPEMIPTSLAI
EHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEE
SIGAGREGLPFPSIVEALIMEVVLELLREAGIRLPGPLGQTLGVVGALILGQAAVQANIV
EECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SSAMVIVVALTAISGFVAPRFDAAIALRILRFFLMVMAAFLGLYGIILGLMLILAHLASL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSFGVPYLQPWAPLRVPDLKDSVYRAAFFKQRWRPFYLKPREVKRIGDRVKKN
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]