Click here to switch to the map view.

The map label for this gene is yndF [H]

Identifier: 83589861

GI number: 83589861

Start: 1041456

End: 1042433

Strand: Reverse

Name: yndF [H]

Synonym: Moth_1013

Alternate gene names: 83589861

Gene position: 1042433-1041456 (Counterclockwise)

Preceding gene: 83589862

Following gene: 83589860

Centisome position: 39.65

GC content: 50.41

Gene sequence:

>978_bases
GTGGGGGGGGGGGGTGGGGGTGGAGGAGGCGATGAAAAGGAGCTACCAACCTGGCAATTGACCTTAACCGGGCTTACTGT
AGATGAGGCCATATCCAACGCTGCTACCAGATCTGAACGCAGGATCTTTTTAGGCCACCAAAAGGTGATAATCATAGGTA
AGGAATTGGCGAGACGCCACAACCTCATGGAAGTGCTGGATTTCTGGCCTCGCAACCGCGAGGGATACCTGGCGATCACG
GTACTGTTAACCGATGGGCGAGCCGGCGATTTGTTTACCGCCCAGCCAAAATTTGCCCGTAGTGTTAGCATGTTTTTGCA
GGAGCAGGCTGAACGCCAGTTGAGGACTTCTCGTTTTATCAAACATAACCTGTCCGACTTGATTGCAACCGTTAATGCCG
GGAGGGATATTTTGATAGCGCGAGCGGCTCTGGTGAAAGGAAAAGATGCCCCGGAATTACAGGTAAGCGGGACGGGAGTA
ATAAAAGAAGGAAAACTGGTTGGCTGGCTCAATCCGGCGGAAACCCAGGCGGCTGTCTGGGTTTCCGGGGAATTTAAGGG
GGGCGAGATCCTGGCTCTGCCTATACCTGAACTTGCCCGCATTTTAAGTCTTAAGCTCAACAAGATAAAGGCGGATGTCC
ACCCTCAATTTACAGGAGAAGGCGTTAGCATGGCTATCAAATTAGATATTAACGCCGACATTACGGAAACAATGGGTAAC
AGGTCGCCCCTGGGGGCAAAGGATCTACCCCTGATAGAGTCGCAAGCTGGCGAAGAGATTAAACAACGAGTCCAGCAGGT
GGTAGGAAGGTTGCAACGGGAATACCAGGCTGATGTTCTTGGGTTCGGGCATAAAATTGAGCAAAGTAACCCTCGTCTGT
GGGAAAACATTAAGAATAACTGGCGGCAAATTTTTATGCAGATGCCTGTATCAGTGGATGTAAAGATTAAAATTCGTCAT
ACGGGCATGGTGAGCTAG

Upstream 100 bases:

>100_bases
GTGGATCTATTATCAGTCGAGAACGGCTCGCAACAAAATGAGCAAATTGAGCTGACTTTGGAAATGCCAATTTTACGCCG
TATGGCTGCCAGGTCTAGTG

Downstream 100 bases:

>100_bases
AGATTGCGGGAAAGAATTGGAACGAACGAAGCCACCTTTTTAATTGTTGCGGCAATGATTGAAGTGGGGACGTTAAAAGG
GGCCAGGAATATTGTTGAAA

Product: spore germination B3 GerAC like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MGGGGGGGGGDEKELPTWQLTLTGLTVDEAISNAATRSERRIFLGHQKVIIIGKELARRHNLMEVLDFWPRNREGYLAIT
VLLTDGRAGDLFTAQPKFARSVSMFLQEQAERQLRTSRFIKHNLSDLIATVNAGRDILIARAALVKGKDAPELQVSGTGV
IKEGKLVGWLNPAETQAAVWVSGEFKGGEILALPIPELARILSLKLNKIKADVHPQFTGEGVSMAIKLDINADITETMGN
RSPLGAKDLPLIESQAGEEIKQRVQQVVGRLQREYQADVLGFGHKIEQSNPRLWENIKNNWRQIFMQMPVSVDVKIKIRH
TGMVS

Sequences:

>Translated_325_residues
MGGGGGGGGGDEKELPTWQLTLTGLTVDEAISNAATRSERRIFLGHQKVIIIGKELARRHNLMEVLDFWPRNREGYLAIT
VLLTDGRAGDLFTAQPKFARSVSMFLQEQAERQLRTSRFIKHNLSDLIATVNAGRDILIARAALVKGKDAPELQVSGTGV
IKEGKLVGWLNPAETQAAVWVSGEFKGGEILALPIPELARILSLKLNKIKADVHPQFTGEGVSMAIKLDINADITETMGN
RSPLGAKDLPLIESQAGEEIKQRVQQVVGRLQREYQADVLGFGHKIEQSNPRLWENIKNNWRQIFMQMPVSVDVKIKIRH
TGMVS
>Mature_324_residues
GGGGGGGGGDEKELPTWQLTLTGLTVDEAISNAATRSERRIFLGHQKVIIIGKELARRHNLMEVLDFWPRNREGYLAITV
LLTDGRAGDLFTAQPKFARSVSMFLQEQAERQLRTSRFIKHNLSDLIATVNAGRDILIARAALVKGKDAPELQVSGTGVI
KEGKLVGWLNPAETQAAVWVSGEFKGGEILALPIPELARILSLKLNKIKADVHPQFTGEGVSMAIKLDINADITETMGNR
SPLGAKDLPLIESQAGEEIKQRVQQVVGRLQREYQADVLGFGHKIEQSNPRLWENIKNNWRQIFMQMPVSVDVKIKIRHT
GMVS

Specific function: May be involved in spore germination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKC lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008844 [H]

Pfam domain/function: PF05504 Spore_GerAC [H]

EC number: NA

Molecular weight: Translated: 35854; Mature: 35723

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGGGGGGGGDEKELPTWQLTLTGLTVDEAISNAATRSERRIFLGHQKVIIIGKELARRH
CCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEECCCEEEEECHHHHHHH
NLMEVLDFWPRNREGYLAITVLLTDGRAGDLFTAQPKFARSVSMFLQEQAERQLRTSRFI
HHHHHHHCCCCCCCCEEEEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
KHNLSDLIATVNAGRDILIARAALVKGKDAPELQVSGTGVIKEGKLVGWLNPAETQAAVW
HHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCEEECCCCEEECCCEEEECCCCCCCEEEE
VSGEFKGGEILALPIPELARILSLKLNKIKADVHPQFTGEGVSMAIKLDINADITETMGN
EECCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHCCC
RSPLGAKDLPLIESQAGEEIKQRVQQVVGRLQREYQADVLGFGHKIEQSNPRLWENIKNN
CCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
WRQIFMQMPVSVDVKIKIRHTGMVS
HHHHHHHCCCEEEEEEEEECCCCCC
>Mature Secondary Structure 
GGGGGGGGGDEKELPTWQLTLTGLTVDEAISNAATRSERRIFLGHQKVIIIGKELARRH
CCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEECCCEEEEECHHHHHHH
NLMEVLDFWPRNREGYLAITVLLTDGRAGDLFTAQPKFARSVSMFLQEQAERQLRTSRFI
HHHHHHHCCCCCCCCEEEEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
KHNLSDLIATVNAGRDILIARAALVKGKDAPELQVSGTGVIKEGKLVGWLNPAETQAAVW
HHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCEEECCCCEEECCCEEEECCCCCCCEEEE
VSGEFKGGEILALPIPELARILSLKLNKIKADVHPQFTGEGVSMAIKLDINADITETMGN
EECCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHCCC
RSPLGAKDLPLIESQAGEEIKQRVQQVVGRLQREYQADVLGFGHKIEQSNPRLWENIKNN
CCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
WRQIFMQMPVSVDVKIKIRHTGMVS
HHHHHHHCCCEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]