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The map label for this gene is ydaM [C]

Identifier: 83589543

GI number: 83589543

Start: 718273

End: 720783

Strand: Reverse

Name: ydaM [C]

Synonym: Moth_0689

Alternate gene names: 83589543

Gene position: 720783-718273 (Counterclockwise)

Preceding gene: 83589544

Following gene: 83589540

Centisome position: 27.42

GC content: 46.0

Gene sequence:

>2511_bases
TTGTCCTTTGACATTTCCGAGCTTTTAACTCTATATGACGTGGTGACTTTCTCCTTTCCGGAGCGATATGAAGATCTAAT
GCGAGAAATAATTGAAAAGGCGACCAGGCTTTTTGGTGTACGCCGCCTGGCCATAGTACTTCGCGAGGGTGAGAGGTATA
AATGCATAGAGCGGTGGGGGTTTCGAAGGGATGAAGAGGTACTAGAAAGGATTAAAAACGGCGGGGAAAACAGCTTTATA
TATTTAATGCGAAACGGCGAGCAAGGCCTGCTTTATATAGAGCCTCCCGGAAGAATTTCTGAACGCGAGAAAAGGCTTTA
TACCATTTTTGCACGTCGCATCGAGAACATAATCGCCCGCAAGCAAATTGAAGAAAAAATAAAAAACTCCGAGCAGGAAA
AAAAGGTCATCTTGGATAGTATAGTGGAGCTCCTGGTTTTTCAGAACCCAGACAACCGGATTTTATGGGCCAACAGGGCC
GCAGCAGAGTATGCCGGGGCGAGATCCGAAGAGTTAGCCGGGCGTTTTTGTTATGAGGCATTGCATCACAGAGACGAACC
GTGTGAAGAATGCCCTGTAATCAAGGCTTTAGACACGGGCGTACCGCAGGAAGGTATTATCGCCTCTCTTGAGGGCCGGC
AGTTTTTTGTAAGAGGCTACCCTGTAAAGAAGGAAAACGGGTTAATCGAGGGAATAGTAGAAGTTAGTGTTGATGTTACC
GAGCGCATGCAAGCGGAAGAGGCGTTCCGGACAATCTTCAATAGCGTTCACGATGCTATTTTCATACATACGCTGGATGG
AAAAATTATTGACGTAAACCAGACGATGTTGCGAATGTACGTGATAAATTCAAAAGAGGAAGCCATAAAATTGTCTATAA
TCGATGATTATTCTATTCCCGGCAGTACGGCAGAACAACTGCCCTTGCTGTGGCAAAAAGTAATTTCAGGAGAAAATTTA
CTGTTTGAGTGGAAAGCCAGGCGGCCCGTAGATGGCTCGGTATTTGATGTAGAGGTGTTTTTAAAAAAAATATCCCTCAG
CAAAAAAGATGTAATCCTCGCTGCTGTGCGTGATATTACGGAACGCAAGCGTGAGGAAGAATTATTGAGAAACTTATTTA
CCCACTCGCCAATTGGAATGTACATCGTCAGTGAAGGAAAATTCCAGCTTATAAATCCACAATTTGAAATACTTACGGGT
TATCGTCAAGACAAGCTAATTGGGATGGAATCATTGAATCTTGTAGTTCCTGAAGACAGGAAAATGGTACGGAGTAATGC
CATTAAAATGCTGAAAGGCGAGGCTGTGGAGCCTTATGAGTTCAGGATCGTAACTGGACAAGGTGACATACGGTGGATGG
AGGAGACAGTGGCTTCTATATGGCATGATGGCAAGCGTGTGACCCTGGGAAACATAATAGATATCACCCAAAAGAAGAAA
TTTGAACAGAAACTGGCATATATAAGCCTGCATGATCAGTTAACGGCTCTTTACAACCGTGCTTATTTTGAAGAAGAGCT
CAAGCGATTGAGCACCAGCCGTAAATATCCCATTACGATAATAGTTGCCGATGTAAACGGCCTGAAGCTTGTTAACGATA
CTATGGGCCATGATAAAGGCGATGAGCTTTTGACTGCCTGCGCTCGGGTTCTTAAAAAAGCGTTTCGCAGTTCGGATGTT
GTGGCGCGAGTGGGAGGAGATGAATTTGTCGCTCTCCTTCCTCGCACTGACGGAAAAACCGGCAAGAGTATCCTGAAGCG
CCTCCGTTTATTTATTGACAAATACAATCAGGAGCATCCTGAACTGCCCTTAAGCGTATCCTTCGGCATAGCGACGGCTG
ACACTCCAGAACAATCTCTGAAAGAAATTTATAAAAAAGCCGACGACCTGATGTACCAGGAAAAACTTAATCTGGGTTCC
AGTGCCCGGAGTAAGATTGTCAATGCCCTTTTAACCGCACTTTCAGAACGCGATTATATAACTGAAGGGCATGCCAGACG
CATGCAGAAGTTGTGCCAGGATTTAGGAGAAAAGGTTGGACTTTCAGCGCAACAGCTTGCCAACCTGTCCCTGCTGGCTC
AGGTCCATGACCTCGGGAAAGTGGGAATACCGGACAGAATCCTCTTCAAGAGAGGTCCCCTTACAGAAAAAGAATGGGAG
GTGATGCGTCAGCACCCGGAAAAGGGCTACCGCATCGCCATGTCGTCACCGGATCTGGCAGGGATCGCTGATTTAATCCT
CAAGCATCATGAAAAGTGGGATGGTACTGGTTACCCCCTGGGCCTCAAAGAAGAAGAAATACCAATCGAGTGTCGAATTC
TATCAATTGTTGACGCCTTTGATGCCATGACGTCCGGCAGGCCATATTGCAGGACTAAAACAATAGAGGATGCGCTAAAG
GAAATCCGGCGGTGCGCAGGCACCCAGTTTGATCCAAGGCTGGCTGAGGCATTCATAGAGATGATTACCTCGGAGAAGTT
TACTGCTGGCGAAAAGGAAGTGGCCACTTAG

Upstream 100 bases:

>100_bases
TCCAGTTATAGGGATGCTATCCTTCGGCGAAATTAGCAGCATCTCAGGGACACCGCTATTTTACAACAAGACCATTGTAG
CTGCCGCGGGGTGGTAGAGA

Downstream 100 bases:

>100_bases
TTTCCGGTCACCGTACTCGTCCCCGAAGGGTAGGCTTGCGAAAGCCTCCCCTCACTGGCCCGGGGGATTATAGGGGTTGC
CCGCTAGTCAAGGCTTCTGG

Product: putative PAS/PAC sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 836; Mature: 835

Protein sequence:

>836_residues
MSFDISELLTLYDVVTFSFPERYEDLMREIIEKATRLFGVRRLAIVLREGERYKCIERWGFRRDEEVLERIKNGGENSFI
YLMRNGEQGLLYIEPPGRISEREKRLYTIFARRIENIIARKQIEEKIKNSEQEKKVILDSIVELLVFQNPDNRILWANRA
AAEYAGARSEELAGRFCYEALHHRDEPCEECPVIKALDTGVPQEGIIASLEGRQFFVRGYPVKKENGLIEGIVEVSVDVT
ERMQAEEAFRTIFNSVHDAIFIHTLDGKIIDVNQTMLRMYVINSKEEAIKLSIIDDYSIPGSTAEQLPLLWQKVISGENL
LFEWKARRPVDGSVFDVEVFLKKISLSKKDVILAAVRDITERKREEELLRNLFTHSPIGMYIVSEGKFQLINPQFEILTG
YRQDKLIGMESLNLVVPEDRKMVRSNAIKMLKGEAVEPYEFRIVTGQGDIRWMEETVASIWHDGKRVTLGNIIDITQKKK
FEQKLAYISLHDQLTALYNRAYFEEELKRLSTSRKYPITIIVADVNGLKLVNDTMGHDKGDELLTACARVLKKAFRSSDV
VARVGGDEFVALLPRTDGKTGKSILKRLRLFIDKYNQEHPELPLSVSFGIATADTPEQSLKEIYKKADDLMYQEKLNLGS
SARSKIVNALLTALSERDYITEGHARRMQKLCQDLGEKVGLSAQQLANLSLLAQVHDLGKVGIPDRILFKRGPLTEKEWE
VMRQHPEKGYRIAMSSPDLAGIADLILKHHEKWDGTGYPLGLKEEEIPIECRILSIVDAFDAMTSGRPYCRTKTIEDALK
EIRRCAGTQFDPRLAEAFIEMITSEKFTAGEKEVAT

Sequences:

>Translated_836_residues
MSFDISELLTLYDVVTFSFPERYEDLMREIIEKATRLFGVRRLAIVLREGERYKCIERWGFRRDEEVLERIKNGGENSFI
YLMRNGEQGLLYIEPPGRISEREKRLYTIFARRIENIIARKQIEEKIKNSEQEKKVILDSIVELLVFQNPDNRILWANRA
AAEYAGARSEELAGRFCYEALHHRDEPCEECPVIKALDTGVPQEGIIASLEGRQFFVRGYPVKKENGLIEGIVEVSVDVT
ERMQAEEAFRTIFNSVHDAIFIHTLDGKIIDVNQTMLRMYVINSKEEAIKLSIIDDYSIPGSTAEQLPLLWQKVISGENL
LFEWKARRPVDGSVFDVEVFLKKISLSKKDVILAAVRDITERKREEELLRNLFTHSPIGMYIVSEGKFQLINPQFEILTG
YRQDKLIGMESLNLVVPEDRKMVRSNAIKMLKGEAVEPYEFRIVTGQGDIRWMEETVASIWHDGKRVTLGNIIDITQKKK
FEQKLAYISLHDQLTALYNRAYFEEELKRLSTSRKYPITIIVADVNGLKLVNDTMGHDKGDELLTACARVLKKAFRSSDV
VARVGGDEFVALLPRTDGKTGKSILKRLRLFIDKYNQEHPELPLSVSFGIATADTPEQSLKEIYKKADDLMYQEKLNLGS
SARSKIVNALLTALSERDYITEGHARRMQKLCQDLGEKVGLSAQQLANLSLLAQVHDLGKVGIPDRILFKRGPLTEKEWE
VMRQHPEKGYRIAMSSPDLAGIADLILKHHEKWDGTGYPLGLKEEEIPIECRILSIVDAFDAMTSGRPYCRTKTIEDALK
EIRRCAGTQFDPRLAEAFIEMITSEKFTAGEKEVAT
>Mature_835_residues
SFDISELLTLYDVVTFSFPERYEDLMREIIEKATRLFGVRRLAIVLREGERYKCIERWGFRRDEEVLERIKNGGENSFIY
LMRNGEQGLLYIEPPGRISEREKRLYTIFARRIENIIARKQIEEKIKNSEQEKKVILDSIVELLVFQNPDNRILWANRAA
AEYAGARSEELAGRFCYEALHHRDEPCEECPVIKALDTGVPQEGIIASLEGRQFFVRGYPVKKENGLIEGIVEVSVDVTE
RMQAEEAFRTIFNSVHDAIFIHTLDGKIIDVNQTMLRMYVINSKEEAIKLSIIDDYSIPGSTAEQLPLLWQKVISGENLL
FEWKARRPVDGSVFDVEVFLKKISLSKKDVILAAVRDITERKREEELLRNLFTHSPIGMYIVSEGKFQLINPQFEILTGY
RQDKLIGMESLNLVVPEDRKMVRSNAIKMLKGEAVEPYEFRIVTGQGDIRWMEETVASIWHDGKRVTLGNIIDITQKKKF
EQKLAYISLHDQLTALYNRAYFEEELKRLSTSRKYPITIIVADVNGLKLVNDTMGHDKGDELLTACARVLKKAFRSSDVV
ARVGGDEFVALLPRTDGKTGKSILKRLRLFIDKYNQEHPELPLSVSFGIATADTPEQSLKEIYKKADDLMYQEKLNLGSS
ARSKIVNALLTALSERDYITEGHARRMQKLCQDLGEKVGLSAQQLANLSLLAQVHDLGKVGIPDRILFKRGPLTEKEWEV
MRQHPEKGYRIAMSSPDLAGIADLILKHHEKWDGTGYPLGLKEEEIPIECRILSIVDAFDAMTSGRPYCRTKTIEDALKE
IRRCAGTQFDPRLAEAFIEMITSEKFTAGEKEVAT

Specific function: Unknown

COG id: COG3437

COG function: function code KT; Response regulator containing a CheY-like receiver domain and an HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Escherichia coli, GI87081881, Length=297, Percent_Identity=29.2929292929293, Blast_Score=117, Evalue=4e-27,
Organism=Escherichia coli, GI1787262, Length=165, Percent_Identity=35.1515151515151, Blast_Score=101, Evalue=3e-22,
Organism=Escherichia coli, GI1788381, Length=301, Percent_Identity=28.5714285714286, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI1786584, Length=164, Percent_Identity=29.8780487804878, Blast_Score=90, Evalue=5e-19,
Organism=Escherichia coli, GI87082007, Length=162, Percent_Identity=29.6296296296296, Blast_Score=87, Evalue=6e-18,
Organism=Escherichia coli, GI87081974, Length=169, Percent_Identity=31.3609467455621, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1787802, Length=150, Percent_Identity=28.6666666666667, Blast_Score=74, Evalue=6e-14,
Organism=Escherichia coli, GI1787541, Length=270, Percent_Identity=27.037037037037, Blast_Score=73, Evalue=8e-14,
Organism=Escherichia coli, GI145693134, Length=152, Percent_Identity=30.9210526315789, Blast_Score=69, Evalue=2e-12,
Organism=Escherichia coli, GI1788085, Length=187, Percent_Identity=27.807486631016, Blast_Score=66, Evalue=1e-11,
Organism=Escherichia coli, GI1787816, Length=147, Percent_Identity=29.2517006802721, Blast_Score=63, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 95638; Mature: 95507

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFDISELLTLYDVVTFSFPERYEDLMREIIEKATRLFGVRRLAIVLREGERYKCIERWG
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHC
FRRDEEVLERIKNGGENSFIYLMRNGEQGLLYIEPPGRISEREKRLYTIFARRIENIIAR
CCCCHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
KQIEEKIKNSEQEKKVILDSIVELLVFQNPDNRILWANRAAAEYAGARSEELAGRFCYEA
HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHCCCCHHHHHHHHHHHH
LHHRDEPCEECPVIKALDTGVPQEGIIASLEGRQFFVRGYPVKKENGLIEGIVEVSVDVT
HHCCCCCHHHCCCHHHHHCCCCCCCCEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHH
ERMQAEEAFRTIFNSVHDAIFIHTLDGKIIDVNQTMLRMYVINSKEEAIKLSIIDDYSIP
HHHHHHHHHHHHHHHHHHEEEEEECCCEEEECCHHEEHHHEECCCCCEEEEEEEECCCCC
GSTAEQLPLLWQKVISGENLLFEWKARRPVDGSVFDVEVFLKKISLSKKDVILAAVRDIT
CCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHH
ERKREEELLRNLFTHSPIGMYIVSEGKFQLINPQFEILTGYRQDKLIGMESLNLVVPEDR
HHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCHHHCCCCCCCEECHHHCCEECCCHH
KMVRSNAIKMLKGEAVEPYEFRIVTGQGDIRWMEETVASIWHDGKRVTLGNIIDITQKKK
HHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHH
FEQKLAYISLHDQLTALYNRAYFEEELKRLSTSRKYPITIIVADVNGLKLVNDTMGHDKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECHHCCCCCC
DELLTACARVLKKAFRSSDVVARVGGDEFVALLPRTDGKTGKSILKRLRLFIDKYNQEHP
HHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC
ELPLSVSFGIATADTPEQSLKEIYKKADDLMYQEKLNLGSSARSKIVNALLTALSERDYI
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
TEGHARRMQKLCQDLGEKVGLSAQQLANLSLLAQVHDLGKVGIPDRILFKRGPLTEKEWE
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHH
VMRQHPEKGYRIAMSSPDLAGIADLILKHHEKWDGTGYPLGLKEEEIPIECRILSIVDAF
HHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHH
DAMTSGRPYCRTKTIEDALKEIRRCAGTQFDPRLAEAFIEMITSEKFTAGEKEVAT
HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHCCC
>Mature Secondary Structure 
SFDISELLTLYDVVTFSFPERYEDLMREIIEKATRLFGVRRLAIVLREGERYKCIERWG
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHC
FRRDEEVLERIKNGGENSFIYLMRNGEQGLLYIEPPGRISEREKRLYTIFARRIENIIAR
CCCCHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
KQIEEKIKNSEQEKKVILDSIVELLVFQNPDNRILWANRAAAEYAGARSEELAGRFCYEA
HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHCCCCHHHHHHHHHHHH
LHHRDEPCEECPVIKALDTGVPQEGIIASLEGRQFFVRGYPVKKENGLIEGIVEVSVDVT
HHCCCCCHHHCCCHHHHHCCCCCCCCEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHH
ERMQAEEAFRTIFNSVHDAIFIHTLDGKIIDVNQTMLRMYVINSKEEAIKLSIIDDYSIP
HHHHHHHHHHHHHHHHHHEEEEEECCCEEEECCHHEEHHHEECCCCCEEEEEEEECCCCC
GSTAEQLPLLWQKVISGENLLFEWKARRPVDGSVFDVEVFLKKISLSKKDVILAAVRDIT
CCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHH
ERKREEELLRNLFTHSPIGMYIVSEGKFQLINPQFEILTGYRQDKLIGMESLNLVVPEDR
HHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCHHHCCCCCCCEECHHHCCEECCCHH
KMVRSNAIKMLKGEAVEPYEFRIVTGQGDIRWMEETVASIWHDGKRVTLGNIIDITQKKK
HHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHH
FEQKLAYISLHDQLTALYNRAYFEEELKRLSTSRKYPITIIVADVNGLKLVNDTMGHDKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECHHCCCCCC
DELLTACARVLKKAFRSSDVVARVGGDEFVALLPRTDGKTGKSILKRLRLFIDKYNQEHP
HHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC
ELPLSVSFGIATADTPEQSLKEIYKKADDLMYQEKLNLGSSARSKIVNALLTALSERDYI
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
TEGHARRMQKLCQDLGEKVGLSAQQLANLSLLAQVHDLGKVGIPDRILFKRGPLTEKEWE
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHH
VMRQHPEKGYRIAMSSPDLAGIADLILKHHEKWDGTGYPLGLKEEEIPIECRILSIVDAF
HHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHH
DAMTSGRPYCRTKTIEDALKEIRRCAGTQFDPRLAEAFIEMITSEKFTAGEKEVAT
HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]