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The map label for this gene is 83589360

Identifier: 83589360

GI number: 83589360

Start: 510885

End: 512567

Strand: Reverse

Name: 83589360

Synonym: Moth_0496

Alternate gene names: NA

Gene position: 512567-510885 (Counterclockwise)

Preceding gene: 83589361

Following gene: 83589359

Centisome position: 19.5

GC content: 57.22

Gene sequence:

>1683_bases
ATGCTCTTAGAAAGCCTGCGGGAGTATTCCACCCGCCTGGACCTGCCCCCGGTCATGTATGTTAAAACCCCCATCCGCTG
GTTTATCGATCTGGACAGCCAGGGTAACTTGCTGGGTTTTGTTTCAGCTACAGGGCCTGAAACCCGGGGCAAGGACCGCG
GCAAAATAATGTATGCCCCGAATATAGTCCGTTCCTCAGGAGTTAAACCAAAGCTGTTGGCCGATAAGGGCGATTATGTC
CTGGGCCTGGCCAGTGAAAAGTCAAAACTGGAAAGGGTAAATGAATGTCACCGGGCCTTTATCGACCTGGTACGTCAGTG
CGCCATTTCTACAGGTAATAAATCCGTTCAGGCGGTCCTGCGTTTCCTGGAAAACTGGGACCCCGAAGGGGCCAGACTCC
CCGAGGATTTTAATCCCGGCGATAATCTAACCTTCCGGGTCGATGGCCGCCTGCCGATAGAAGATCCAGATGTACAAAGC
TTCTGGGCCGATTATACCAATCCCCAGGAGGGAGAAGCTACCACCTGCCTGCTCTGCGGGCAGCTTAAAACCCCGGCTGA
GCGCCACCCAGTGAAAATCAAAGGCATCCCCGGCGGGCAGACAGCAGGTATGGCCCTAGTGTCGGCCAACGCTGCCGCCT
TTGAATCCTATGGCTTGCAGGCTTCCCTTATTGCCCCTATCTGCTACGACTGCGCCGAGCGTTACGGCAAGGCGGCCAAT
GCTTTAATTGAAAATGATGCCACCCACCTGCGCCTGGGTTCCTGTATCTACCTCTTCTGGACCCGTAAGCCAAGCAATTT
TTCCATCGCCAGTCTCCTTTCCAATCCCCAACCGGAGGACGTCAAAGCCCTCCTTGCCGCAGTGTATACCGGCCGCCAGG
CGGACCTTGAAGACGACAACCTATTTTATGCCACGGCCCTGAGCAGCAGTGGCGGCCGGGTGGCAGTGCGCGACTGGCTG
GAAACGACCCTGGGGGATGTCAAGCGCAACCTGGGCCACTACTTCGCCTTACAGCGGCTAGTCGATGCCGGTGGCCGGGA
AGGACCGCCGCTGGGATTATTCCCCCTTGCTTGGAGCACCGTCCGGGAGCCCAAGGACCTGCCGCCCACAACTACTCGGG
CCCTCCTGCACTTCGCCCTCAAGGGCGGTGCCCTGCCCCACTGGCTTCTTTATGAAGCCATAAAGCGGGCCCGGGCAGAA
AAGGATCAGGAAAAAATAACCCGGTCCCGGGCGGCTTTAATCAAAATGGTTCTCTTCTCTCAAAAACCAAATCTAGCGGA
GGGATCTGCCTTGGAAAAGCTGGACACGTCCAACCGAAACCCTGCTTACCTGTGCGGCCGTCTCCTGGCTGTCCTGGAAG
GCATCCAGTGGTCTGCCCTTCCAGGGATAAAAGCCACCATCGTCGACCGTTTCTATGGGACTGCTTCCACGGCGCCGGCC
GCGGTCTTCAGCAGGCTGCTCCGCGGCAGCCAGAGCCACCTGGGCAAGCTGCGCAAGGAAAAGCCCGGCCTTTACTATTA
CTGGCAGCAGGCCCTGGAATCTATTCTAGGAAACCTGTCGTCCTTCCCTCCTGTTTTAACCCTGGAGGAGCAGGGTTATT
TTGCCCTGGGTTATTACCACCAGCGGGCAGCTAACAGGGAAGGCACAAATTCTAAGGAAGACGGGGAGGAAACCCGGCCA
TAG

Upstream 100 bases:

>100_bases
CGGCGAAGGCAGGCCCGTATTCTTTAACGCTCGCCTGGAAAACGGCATCCTCCGGGTGCCGCAAGACCTTTATAAAGAAA
TCGGGAGGTGAAACCGTCAC

Downstream 100 bases:

>100_bases
CTCATTAAAACTACCTGAGTTGATGCAGTTGGATAACGTAACCACCTGTTACTCATGGTAATAATTGATTATCAAACAGG
AGGAGATTTAAAATGACCGT

Product: CRISPR-associated Csd1 family protein

Products: NA

Alternate protein names: CRISPR-Associated Csd1 Family Protein; CRISPR-Associated RAMP Csd1 Family Protein; Csd1 Family CRISPR-Associated Protein; Crispr-Protein; CRISPR-Associated Protein Csd2 Family; CRISPR-Associated Protein; Crispr-Associated Protein Csd1 Family

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MLLESLREYSTRLDLPPVMYVKTPIRWFIDLDSQGNLLGFVSATGPETRGKDRGKIMYAPNIVRSSGVKPKLLADKGDYV
LGLASEKSKLERVNECHRAFIDLVRQCAISTGNKSVQAVLRFLENWDPEGARLPEDFNPGDNLTFRVDGRLPIEDPDVQS
FWADYTNPQEGEATTCLLCGQLKTPAERHPVKIKGIPGGQTAGMALVSANAAAFESYGLQASLIAPICYDCAERYGKAAN
ALIENDATHLRLGSCIYLFWTRKPSNFSIASLLSNPQPEDVKALLAAVYTGRQADLEDDNLFYATALSSSGGRVAVRDWL
ETTLGDVKRNLGHYFALQRLVDAGGREGPPLGLFPLAWSTVREPKDLPPTTTRALLHFALKGGALPHWLLYEAIKRARAE
KDQEKITRSRAALIKMVLFSQKPNLAEGSALEKLDTSNRNPAYLCGRLLAVLEGIQWSALPGIKATIVDRFYGTASTAPA
AVFSRLLRGSQSHLGKLRKEKPGLYYYWQQALESILGNLSSFPPVLTLEEQGYFALGYYHQRAANREGTNSKEDGEETRP

Sequences:

>Translated_560_residues
MLLESLREYSTRLDLPPVMYVKTPIRWFIDLDSQGNLLGFVSATGPETRGKDRGKIMYAPNIVRSSGVKPKLLADKGDYV
LGLASEKSKLERVNECHRAFIDLVRQCAISTGNKSVQAVLRFLENWDPEGARLPEDFNPGDNLTFRVDGRLPIEDPDVQS
FWADYTNPQEGEATTCLLCGQLKTPAERHPVKIKGIPGGQTAGMALVSANAAAFESYGLQASLIAPICYDCAERYGKAAN
ALIENDATHLRLGSCIYLFWTRKPSNFSIASLLSNPQPEDVKALLAAVYTGRQADLEDDNLFYATALSSSGGRVAVRDWL
ETTLGDVKRNLGHYFALQRLVDAGGREGPPLGLFPLAWSTVREPKDLPPTTTRALLHFALKGGALPHWLLYEAIKRARAE
KDQEKITRSRAALIKMVLFSQKPNLAEGSALEKLDTSNRNPAYLCGRLLAVLEGIQWSALPGIKATIVDRFYGTASTAPA
AVFSRLLRGSQSHLGKLRKEKPGLYYYWQQALESILGNLSSFPPVLTLEEQGYFALGYYHQRAANREGTNSKEDGEETRP
>Mature_560_residues
MLLESLREYSTRLDLPPVMYVKTPIRWFIDLDSQGNLLGFVSATGPETRGKDRGKIMYAPNIVRSSGVKPKLLADKGDYV
LGLASEKSKLERVNECHRAFIDLVRQCAISTGNKSVQAVLRFLENWDPEGARLPEDFNPGDNLTFRVDGRLPIEDPDVQS
FWADYTNPQEGEATTCLLCGQLKTPAERHPVKIKGIPGGQTAGMALVSANAAAFESYGLQASLIAPICYDCAERYGKAAN
ALIENDATHLRLGSCIYLFWTRKPSNFSIASLLSNPQPEDVKALLAAVYTGRQADLEDDNLFYATALSSSGGRVAVRDWL
ETTLGDVKRNLGHYFALQRLVDAGGREGPPLGLFPLAWSTVREPKDLPPTTTRALLHFALKGGALPHWLLYEAIKRARAE
KDQEKITRSRAALIKMVLFSQKPNLAEGSALEKLDTSNRNPAYLCGRLLAVLEGIQWSALPGIKATIVDRFYGTASTAPA
AVFSRLLRGSQSHLGKLRKEKPGLYYYWQQALESILGNLSSFPPVLTLEEQGYFALGYYHQRAANREGTNSKEDGEETRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61809; Mature: 61809

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLESLREYSTRLDLPPVMYVKTPIRWFIDLDSQGNLLGFVSATGPETRGKDRGKIMYAP
CHHHHHHHHHHHCCCCCEEEEECCEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEECC
NIVRSSGVKPKLLADKGDYVLGLASEKSKLERVNECHRAFIDLVRQCAISTGNKSVQAVL
CHHHCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
RFLENWDPEGARLPEDFNPGDNLTFRVDGRLPIEDPDVQSFWADYTNPQEGEATTCLLCG
HHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEC
QLKTPAERHPVKIKGIPGGQTAGMALVSANAAAFESYGLQASLIAPICYDCAERYGKAAN
CCCCCHHHCCEEEECCCCCCCCCEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ALIENDATHLRLGSCIYLFWTRKPSNFSIASLLSNPQPEDVKALLAAVYTGRQADLEDDN
HHHCCCCCEEEECCEEEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC
LFYATALSSSGGRVAVRDWLETTLGDVKRNLGHYFALQRLVDAGGREGPPLGLFPLAWST
EEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
VREPKDLPPTTTRALLHFALKGGALPHWLLYEAIKRARAEKDQEKITRSRAALIKMVLFS
HCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QKPNLAEGSALEKLDTSNRNPAYLCGRLLAVLEGIQWSALPGIKATIVDRFYGTASTAPA
CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHH
AVFSRLLRGSQSHLGKLRKEKPGLYYYWQQALESILGNLSSFPPVLTLEEQGYFALGYYH
HHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEHHH
QRAANREGTNSKEDGEETRP
HHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLLESLREYSTRLDLPPVMYVKTPIRWFIDLDSQGNLLGFVSATGPETRGKDRGKIMYAP
CHHHHHHHHHHHCCCCCEEEEECCEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEECC
NIVRSSGVKPKLLADKGDYVLGLASEKSKLERVNECHRAFIDLVRQCAISTGNKSVQAVL
CHHHCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
RFLENWDPEGARLPEDFNPGDNLTFRVDGRLPIEDPDVQSFWADYTNPQEGEATTCLLCG
HHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEC
QLKTPAERHPVKIKGIPGGQTAGMALVSANAAAFESYGLQASLIAPICYDCAERYGKAAN
CCCCCHHHCCEEEECCCCCCCCCEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ALIENDATHLRLGSCIYLFWTRKPSNFSIASLLSNPQPEDVKALLAAVYTGRQADLEDDN
HHHCCCCCEEEECCEEEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC
LFYATALSSSGGRVAVRDWLETTLGDVKRNLGHYFALQRLVDAGGREGPPLGLFPLAWST
EEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
VREPKDLPPTTTRALLHFALKGGALPHWLLYEAIKRARAEKDQEKITRSRAALIKMVLFS
HCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QKPNLAEGSALEKLDTSNRNPAYLCGRLLAVLEGIQWSALPGIKATIVDRFYGTASTAPA
CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHH
AVFSRLLRGSQSHLGKLRKEKPGLYYYWQQALESILGNLSSFPPVLTLEEQGYFALGYYH
HHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEHHH
QRAANREGTNSKEDGEETRP
HHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA