| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is ybeZ [H]
Identifier: 83595100
GI number: 83595100
Start: 4319690
End: 4320658
Strand: Direct
Name: ybeZ [H]
Synonym: Rru_A3771
Alternate gene names: 83595100
Gene position: 4319690-4320658 (Clockwise)
Preceding gene: 83595099
Following gene: 83595101
Centisome position: 99.24
GC content: 65.22
Gene sequence:
>969_bases GTGAGCGACGAAGAAACCCGCAGCACCCGGTCCTATGACGATAACGGGGCCCTGCAGATCCTGATCGGCGCCGCCGGCGA CAATCTCGATCGTCTTGAACAGGTGCTCGACGTCGGCATCGCCATGCGCGGCAATCGCCTGACCGTCAACGGCCCGGCCG ATCGCGTTCGCACCGCCTGGCAGGCCCTGGATAGCCTTTACACCCGGGCTTTGGGCGGCGAGGGCATCGAACGCGGCGAT ATCGACGCCGCGGTGCGCATGGCCGGCGAGGAAACCGTGCCGGTGGTGGCGATCAAAACCCGCAAGCGCGAGATCAAGGC GCGCTCGCCGATGCAGGCCCGCTATCTGGAAACCATGCTCAGCCACGAACTGGTTTTCGGCCTGGGCCCGGCGGGCACCG GCAAGACCTATCTGGCGGTGGCGATGGCCGTGTCGATGTTCCTTCAGCGTCGGGTCGAGCGGCTGATCTTGTCGCGCCCG GCGGTCGAGGCCGGCGAGCGCATCGGTTTCCTGCCCGGCGACATGCGCGACAAGGTCGACCCCTATCTGCGGCCGATGTA TGACGCGCTTTATGACATGCTGCCCGGCGATGAGGTGGTCCGCCGCCTGGACTCGGGCGAGATCGAGGTCGCGCCGCTGG CCTTCATGCGCGGCCGCACCCTGGCCAACGCCTTCGTCATTCTGGACGAGGCCCAGAACACCACGCCCACCCAGATGAAG ATGTTCCTGACCCGTCTGGGTGAGAATTCGCGTATGGTGATTACCGGCGATACCAGTCAGGTCGATTTGCCGCTGGGCGC CAAATCGGGACTGAAGGACGCGATCGAAGTCCTCGATGGTGATCCGGCCATTGGCAAGGTCACCTTTACCCACAAGGATG TCGTGCGCCACGACTTGGTCACCCGCATCGTGCGGGCCTATGACCGCCGCGACGGAACCCTGGAAACATCCACCCGCCAT GCCCGCTGA
Upstream 100 bases:
>100_bases CGTCCAACAGTCTGGCGGCGCGCCTTGTGGAAGGGAACTCATCCATGTCCTCCGATCGGGTTCTTGCAGAGGAAGCGCCG CCGCCCGCGCGCATCCGGGC
Downstream 100 bases:
>100_bases CCCCGCTTTACCCGATCCCGTCCCCCCCGGCCCGACAGCGCCGGTTCCCACCGACTATCCGGTCCGCCTTGCCGTCGACG GCGCGGAAGGACCCTGGGAG
Product: PhoH-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSDEETRSTRSYDDNGALQILIGAAGDNLDRLEQVLDVGIAMRGNRLTVNGPADRVRTAWQALDSLYTRALGGEGIERGD IDAAVRMAGEETVPVVAIKTRKREIKARSPMQARYLETMLSHELVFGLGPAGTGKTYLAVAMAVSMFLQRRVERLILSRP AVEAGERIGFLPGDMRDKVDPYLRPMYDALYDMLPGDEVVRRLDSGEIEVAPLAFMRGRTLANAFVILDEAQNTTPTQMK MFLTRLGENSRMVITGDTSQVDLPLGAKSGLKDAIEVLDGDPAIGKVTFTHKDVVRHDLVTRIVRAYDRRDGTLETSTRH AR
Sequences:
>Translated_322_residues MSDEETRSTRSYDDNGALQILIGAAGDNLDRLEQVLDVGIAMRGNRLTVNGPADRVRTAWQALDSLYTRALGGEGIERGD IDAAVRMAGEETVPVVAIKTRKREIKARSPMQARYLETMLSHELVFGLGPAGTGKTYLAVAMAVSMFLQRRVERLILSRP AVEAGERIGFLPGDMRDKVDPYLRPMYDALYDMLPGDEVVRRLDSGEIEVAPLAFMRGRTLANAFVILDEAQNTTPTQMK MFLTRLGENSRMVITGDTSQVDLPLGAKSGLKDAIEVLDGDPAIGKVTFTHKDVVRHDLVTRIVRAYDRRDGTLETSTRH AR >Mature_321_residues SDEETRSTRSYDDNGALQILIGAAGDNLDRLEQVLDVGIAMRGNRLTVNGPADRVRTAWQALDSLYTRALGGEGIERGDI DAAVRMAGEETVPVVAIKTRKREIKARSPMQARYLETMLSHELVFGLGPAGTGKTYLAVAMAVSMFLQRRVERLILSRPA VEAGERIGFLPGDMRDKVDPYLRPMYDALYDMLPGDEVVRRLDSGEIEVAPLAFMRGRTLANAFVILDEAQNTTPTQMKM FLTRLGENSRMVITGDTSQVDLPLGAKSGLKDAIEVLDGDPAIGKVTFTHKDVVRHDLVTRIVRAYDRRDGTLETSTRHA R
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=308, Percent_Identity=50.6493506493506, Blast_Score=270, Evalue=9e-74, Organism=Escherichia coli, GI1787257, Length=233, Percent_Identity=43.7768240343348, Blast_Score=203, Evalue=1e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 35561; Mature: 35430
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDEETRSTRSYDDNGALQILIGAAGDNLDRLEQVLDVGIAMRGNRLTVNGPADRVRTAW CCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHEECCCEEEECCCHHHHHHHH QALDSLYTRALGGEGIERGDIDAAVRMAGEETVPVVAIKTRKREIKARSPMQARYLETML HHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEECHHHHHHCCCCHHHHHHHHHH SHELVFGLGPAGTGKTYLAVAMAVSMFLQRRVERLILSRPAVEAGERIGFLPGDMRDKVD HHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHCC PYLRPMYDALYDMLPGDEVVRRLDSGEIEVAPLAFMRGRTLANAFVILDEAQNTTPTQMK HHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEHHHHHHCCHHHEEEEEEECCCCCCHHHHH MFLTRLGENSRMVITGDTSQVDLPLGAKSGLKDAIEVLDGDPAIGKVTFTHKDVVRHDLV HHHHHHCCCCEEEEECCCCEEECCCCCCCCHHHHHHHHCCCCCCEEEEECHHHHHHHHHH TRIVRAYDRRDGTLETSTRHAR HHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SDEETRSTRSYDDNGALQILIGAAGDNLDRLEQVLDVGIAMRGNRLTVNGPADRVRTAW CCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHEECCCEEEECCCHHHHHHHH QALDSLYTRALGGEGIERGDIDAAVRMAGEETVPVVAIKTRKREIKARSPMQARYLETML HHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEECHHHHHHCCCCHHHHHHHHHH SHELVFGLGPAGTGKTYLAVAMAVSMFLQRRVERLILSRPAVEAGERIGFLPGDMRDKVD HHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHCC PYLRPMYDALYDMLPGDEVVRRLDSGEIEVAPLAFMRGRTLANAFVILDEAQNTTPTQMK HHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEHHHHHHCCHHHEEEEEEECCCCCCHHHHH MFLTRLGENSRMVITGDTSQVDLPLGAKSGLKDAIEVLDGDPAIGKVTFTHKDVVRHDLV HHHHHHCCCCEEEEECCCCEEECCCCCCCCHHHHHHHHCCCCCCEEEEECHHHHHHHHHH TRIVRAYDRRDGTLETSTRHAR HHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]