| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83595079
Identifier: 83595079
GI number: 83595079
Start: 4298578
End: 4299216
Strand: Direct
Name: 83595079
Synonym: Rru_A3750
Alternate gene names: NA
Gene position: 4298578-4299216 (Clockwise)
Preceding gene: 83595078
Following gene: 83595080
Centisome position: 98.75
GC content: 61.19
Gene sequence:
>639_bases ATGGTGAAACTGTTCGTCGAGGGCGGTGGCGGTCACGAAGCCGCCTGCCGGCAGGCTTTCGCCACCTTCCTCAGCCGCGC CGGTCTGTCCAAAAAGCCCCGGATCATGGTCTGCGGCAGCCGCCATAATGCCTATGACGATTATTGTATCGCCCTTGAAA ACCGTGAAGACGCCGTTTTGCTGGTCGATAGCGAAGGTCCGGTGGCACCCGACATCCAGGCCGGCAAGCCCGACACGTGG CAACCCTGGCGACATCTGAAACAGCGACAAGAGGACGGATGGGATAAGCCAGAGGGGGCGAGGGACGAGGATTGCCACCT GATGGTCCAATGCATGGAGTATTGGCTCGTGGCCGACCGGGAGACCCTCAAGAGTTTCTTTGGGAAAGAGTTCAAGGAAA ACGCCCTGCCCGCCACCGGCGCCCCTCTCGAGTCCTGGTTGAAACAGCGGGTTTATGACGGCCTTGCCCGGGCGACGAAG ACCTGCGAGACCAAGGGGCGTTACGATAAGGGCGCGCATTCCTTCAAATTGCTGACCGCGATCGATCCGGCCAAGGTTGT GGCGGCCTCGCCCTGGGCGGCGCGCTTCGTCGCCCACCTCAAGACCAAAATGGATCACCCCAAAAGGGACCCCCGATGA
Upstream 100 bases:
>100_bases GAACCACCCTGACCCGGCTTGATGGCGAAACGCTCAAGCCCTGGCTGGCGAAATATCGCCTGGGCGAGCTTTGGACCCGT GGTGGAATCGGCGGCACGCG
Downstream 100 bases:
>100_bases CCTTGTCCGGCGCGTTCCTCGGTTTTTTGCTTTTTCCCTTTGTACCCGGGACCTTATGATTGGGTTCCGGCTGCATTCCT CCCATGGTCAAGAAGGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MVKLFVEGGGGHEAACRQAFATFLSRAGLSKKPRIMVCGSRHNAYDDYCIALENREDAVLLVDSEGPVAPDIQAGKPDTW QPWRHLKQRQEDGWDKPEGARDEDCHLMVQCMEYWLVADRETLKSFFGKEFKENALPATGAPLESWLKQRVYDGLARATK TCETKGRYDKGAHSFKLLTAIDPAKVVAASPWAARFVAHLKTKMDHPKRDPR
Sequences:
>Translated_212_residues MVKLFVEGGGGHEAACRQAFATFLSRAGLSKKPRIMVCGSRHNAYDDYCIALENREDAVLLVDSEGPVAPDIQAGKPDTW QPWRHLKQRQEDGWDKPEGARDEDCHLMVQCMEYWLVADRETLKSFFGKEFKENALPATGAPLESWLKQRVYDGLARATK TCETKGRYDKGAHSFKLLTAIDPAKVVAASPWAARFVAHLKTKMDHPKRDPR >Mature_212_residues MVKLFVEGGGGHEAACRQAFATFLSRAGLSKKPRIMVCGSRHNAYDDYCIALENREDAVLLVDSEGPVAPDIQAGKPDTW QPWRHLKQRQEDGWDKPEGARDEDCHLMVQCMEYWLVADRETLKSFFGKEFKENALPATGAPLESWLKQRVYDGLARATK TCETKGRYDKGAHSFKLLTAIDPAKVVAASPWAARFVAHLKTKMDHPKRDPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23872; Mature: 23872
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKLFVEGGGGHEAACRQAFATFLSRAGLSKKPRIMVCGSRHNAYDDYCIALENREDAVL CEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEECCCCEEE LVDSEGPVAPDIQAGKPDTWQPWRHLKQRQEDGWDKPEGARDEDCHLMVQCMEYWLVADR EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCH ETLKSFFGKEFKENALPATGAPLESWLKQRVYDGLARATKTCETKGRYDKGAHSFKLLTA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE IDPAKVVAASPWAARFVAHLKTKMDHPKRDPR CCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MVKLFVEGGGGHEAACRQAFATFLSRAGLSKKPRIMVCGSRHNAYDDYCIALENREDAVL CEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEECCCCEEE LVDSEGPVAPDIQAGKPDTWQPWRHLKQRQEDGWDKPEGARDEDCHLMVQCMEYWLVADR EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCH ETLKSFFGKEFKENALPATGAPLESWLKQRVYDGLARATKTCETKGRYDKGAHSFKLLTA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE IDPAKVVAASPWAARFVAHLKTKMDHPKRDPR CCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA