| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83595047
Identifier: 83595047
GI number: 83595047
Start: 4268153
End: 4269541
Strand: Direct
Name: 83595047
Synonym: Rru_A3718
Alternate gene names: NA
Gene position: 4268153-4269541 (Clockwise)
Preceding gene: 83595046
Following gene: 83595048
Centisome position: 98.05
GC content: 61.84
Gene sequence:
>1389_bases GTGAGCGGCGGGCGCGGGCGGGTTCTGGCCCTCAAGGCGGGCGGCGGACGCATTCGCCCGCTTGCCGGCACTGACGCGCC ACCCCTTCCCCGGCCGATGGTCGGCGACGGCGTCGAGGCTGCAGGCGGGGTGGGCGAGGTCTTCGGGAGTCTCCATTGGA AGACCGTGCTGGTCTTTGTCTCGCTGCCGATGGTCCTGCAGGTCTTTCACTATATGATCGACGTCGGACCGGTCTATTAC CTGTCCAAAATCTGGCCTTTGGCCCTGCTGCCGCTGGGCCTGAAGGTCTTTCGCGAGTTTTCCGGCGAAAAGGTGATCTA CGGGTTCGCCATCGTCTATCTGACCGGCGTCACGCCGATCATGTCGATGATCCACTTCGACAACAACGTCGTGGACGCTT TGGCGACGACGGTAAAAGTCTGGCCGCTGACCTATTTCTTTAGTTTTCTTGGCTTGTTATGGATCGCCCGGCCCCAGGAG GACCGGCTGCGCGCCCAGGTTCTTGGTCTTGGTCTGGCGACCTTGGCCGTCATGTGGCTGATGTGGATTTTCATCCCGAA GTCGTTTTATTCAAGCCAGATCGGGATGACGAAGTTATTTTTATGGGATGAGTTGCGCAGTTACCATATTTATTTCCCAA TGACTTTTTCTTTGATCTTATTATTCTATTCCGTTCGCCGTTTTCTTTCTACGCATCGCGCCTGGATCTGGATGCTGCCC GCGCTGTTTGGTCTTTTGACCATGGCGGTCATTTTGAAACAGCGCACGACGATCGCCGCCGCCCTGGTCGTCGTCGGGCT GATCGTGCTGCGCCGGCTGCCCCGGCCGATGCTGATCGGCGCCGTGGCCCTTGGCGGGGCTTTGGCCGTTCTGGGGGGGG TGATCGTGCTGCTGGCCCCGCCCGGCGGTCCGGCCGACGCCATCACCTCGCTGTTCGACTTCGGCGGCTCACTGTCGGTG CGCCAGCAGACGGCGGCGAAGGCGGCTGGCGTCATCTTCGCCTCGCCGTTGTCGTGGATCCTGGGCTCGGGGGCGATCAC CCGGCTCAGCCCGGTCACGCTGAACGATATCTTCGCCTCCAAAATGTTTTTCCTCGCCGATATCGGTTGGCTTGGCGTGC TTTTTGAATATGGCGCCATCGGGTCGATCCTGATCGCCCTGGTCTATGCCATCGGCCTGCGCCGGGCCCTGCGCTCGGGC ATCGCCCCGCCGGGCAGCCCAGCGGGCGATTTTCGCGGGGCCTTGGGCGACATGATCGTGATGGTGAGCGTCGAGACCCT GATTTATTCGCCGGTCTTCACGCCGGGCATCGTCGCCGGTCTGACGGCCTTTCTGATCTACCTGGACAAGGGCGTTCCGG CGCGCGGCGGCGGGATGCAAAGGGGTTAG
Upstream 100 bases:
>100_bases TGGCCAATCCGCGCGGCCATTTCCGCCGGGTTTTCGTCGACTCGCTGCCGCTGGTCGGCTTGGTTCTGGCCGATCGCTTC AAAACAAGGCGGTCGGCCAA
Downstream 100 bases:
>100_bases CTCACCGTGAAAATCATTTTGCGAAAAATTCGGACACTGGTGACCCATCCGGGATTCCGTGCCAATCCGATCGCCGTGCT CGGCCGCTGCGCGGCGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MSGGRGRVLALKAGGGRIRPLAGTDAPPLPRPMVGDGVEAAGGVGEVFGSLHWKTVLVFVSLPMVLQVFHYMIDVGPVYY LSKIWPLALLPLGLKVFREFSGEKVIYGFAIVYLTGVTPIMSMIHFDNNVVDALATTVKVWPLTYFFSFLGLLWIARPQE DRLRAQVLGLGLATLAVMWLMWIFIPKSFYSSQIGMTKLFLWDELRSYHIYFPMTFSLILLFYSVRRFLSTHRAWIWMLP ALFGLLTMAVILKQRTTIAAALVVVGLIVLRRLPRPMLIGAVALGGALAVLGGVIVLLAPPGGPADAITSLFDFGGSLSV RQQTAAKAAGVIFASPLSWILGSGAITRLSPVTLNDIFASKMFFLADIGWLGVLFEYGAIGSILIALVYAIGLRRALRSG IAPPGSPAGDFRGALGDMIVMVSVETLIYSPVFTPGIVAGLTAFLIYLDKGVPARGGGMQRG
Sequences:
>Translated_462_residues MSGGRGRVLALKAGGGRIRPLAGTDAPPLPRPMVGDGVEAAGGVGEVFGSLHWKTVLVFVSLPMVLQVFHYMIDVGPVYY LSKIWPLALLPLGLKVFREFSGEKVIYGFAIVYLTGVTPIMSMIHFDNNVVDALATTVKVWPLTYFFSFLGLLWIARPQE DRLRAQVLGLGLATLAVMWLMWIFIPKSFYSSQIGMTKLFLWDELRSYHIYFPMTFSLILLFYSVRRFLSTHRAWIWMLP ALFGLLTMAVILKQRTTIAAALVVVGLIVLRRLPRPMLIGAVALGGALAVLGGVIVLLAPPGGPADAITSLFDFGGSLSV RQQTAAKAAGVIFASPLSWILGSGAITRLSPVTLNDIFASKMFFLADIGWLGVLFEYGAIGSILIALVYAIGLRRALRSG IAPPGSPAGDFRGALGDMIVMVSVETLIYSPVFTPGIVAGLTAFLIYLDKGVPARGGGMQRG >Mature_461_residues SGGRGRVLALKAGGGRIRPLAGTDAPPLPRPMVGDGVEAAGGVGEVFGSLHWKTVLVFVSLPMVLQVFHYMIDVGPVYYL SKIWPLALLPLGLKVFREFSGEKVIYGFAIVYLTGVTPIMSMIHFDNNVVDALATTVKVWPLTYFFSFLGLLWIARPQED RLRAQVLGLGLATLAVMWLMWIFIPKSFYSSQIGMTKLFLWDELRSYHIYFPMTFSLILLFYSVRRFLSTHRAWIWMLPA LFGLLTMAVILKQRTTIAAALVVVGLIVLRRLPRPMLIGAVALGGALAVLGGVIVLLAPPGGPADAITSLFDFGGSLSVR QQTAAKAAGVIFASPLSWILGSGAITRLSPVTLNDIFASKMFFLADIGWLGVLFEYGAIGSILIALVYAIGLRRALRSGI APPGSPAGDFRGALGDMIVMVSVETLIYSPVFTPGIVAGLTAFLIYLDKGVPARGGGMQRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49837; Mature: 49706
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGRGRVLALKAGGGRIRPLAGTDAPPLPRPMVGDGVEAAGGVGEVFGSLHWKTVLVFV CCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH SLPMVLQVFHYMIDVGPVYYLSKIWPLALLPLGLKVFREFSGEKVIYGFAIVYLTGVTPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHH MSMIHFDNNVVDALATTVKVWPLTYFFSFLGLLWIARPQEDRLRAQVLGLGLATLAVMWL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH MWIFIPKSFYSSQIGMTKLFLWDELRSYHIYFPMTFSLILLFYSVRRFLSTHRAWIWMLP HHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALFGLLTMAVILKQRTTIAAALVVVGLIVLRRLPRPMLIGAVALGGALAVLGGVIVLLAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEEEC PGGPADAITSLFDFGGSLSVRQQTAAKAAGVIFASPLSWILGSGAITRLSPVTLNDIFAS CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH KMFFLADIGWLGVLFEYGAIGSILIALVYAIGLRRALRSGIAPPGSPAGDFRGALGDMIV HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH MVSVETLIYSPVFTPGIVAGLTAFLIYLDKGVPARGGGMQRG HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SGGRGRVLALKAGGGRIRPLAGTDAPPLPRPMVGDGVEAAGGVGEVFGSLHWKTVLVFV CCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH SLPMVLQVFHYMIDVGPVYYLSKIWPLALLPLGLKVFREFSGEKVIYGFAIVYLTGVTPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHH MSMIHFDNNVVDALATTVKVWPLTYFFSFLGLLWIARPQEDRLRAQVLGLGLATLAVMWL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH MWIFIPKSFYSSQIGMTKLFLWDELRSYHIYFPMTFSLILLFYSVRRFLSTHRAWIWMLP HHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALFGLLTMAVILKQRTTIAAALVVVGLIVLRRLPRPMLIGAVALGGALAVLGGVIVLLAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEEEC PGGPADAITSLFDFGGSLSVRQQTAAKAAGVIFASPLSWILGSGAITRLSPVTLNDIFAS CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH KMFFLADIGWLGVLFEYGAIGSILIALVYAIGLRRALRSGIAPPGSPAGDFRGALGDMIV HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH MVSVETLIYSPVFTPGIVAGLTAFLIYLDKGVPARGGGMQRG HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA