Click here to switch to the map view.

The map label for this gene is lolA [H]

Identifier: 83595027

GI number: 83595027

Start: 4244658

End: 4245323

Strand: Reverse

Name: lolA [H]

Synonym: Rru_A3698

Alternate gene names: 83595027

Gene position: 4245323-4244658 (Counterclockwise)

Preceding gene: 83595028

Following gene: 83595026

Centisome position: 97.53

GC content: 63.81

Gene sequence:

>666_bases
ATGGCTCCGAAATCGCTGTTTGCCGCCCTTGCCTTGTTCGTCGCCCTCGCTGTCGGTCTGCCGGCCGGGCCGGCCTCGGC
CCAGGAGGCGCGGAGCATTCTTCCCCAGTTGACCCAGGACCAGCGGGCCTTCGTCGCCCGGGTCGAAGGCTATCTCAATG
GCGTCCGCCGGGTGCAGGCCCGCTTTCTGCAGGTCTCTTCGACGGGCAATTACGCCGAGGGAACGGTGTCGATCAGCCGC
CCCAACCGCATGCGTCTGCAATATGATCCGCCCGCCGATCTTCTGATGGTCGCCAATGGCAGCCAGCTGGTCTATTACGA
CCGCGAGCTTGATCAGGTGTCCTATATCGGTCTCGACTCGACGCCGCTTGGCGTGTTGCTGCGCGACAAGATCGAGCTCA
GCGATCCCAATATCACCGTGACCGCCTACCGCGAGGCCAAGGGCGTGGTGGAGATCGCCCTGGTTCAGACCAATGACCCG
GGGCAGGGCACCCTGACCCTGGTTTTCACCACCGATCCCTTGGAATTGCGCCAGTGGCGGGTGCTCGACGCCCAGAACGT
CGAGGTTTCCGTCTCGTTGTTCAATCCCCAGGTCGGCCTCGCCCTCGACCCCAAGCTGTTCGTCTTCAGCGAAAAGGCCG
AGCGTCCCCAGCGCGACTCCCGATAA

Upstream 100 bases:

>100_bases
TTCTTTTCCTATCTGTGGTTCTCGCGCCCGTCCGTCCTTCCCCAAACGGGGGAGGGGATGGCCCGCCCTTCCGATCCTCT
TCTCCCGCCAAGGACTCCCC

Downstream 100 bases:

>100_bases
GTTTGCGGCCCCAAGGGGCGAAGGGGTAGGCATCTTAAAAACGCATATCTGCTATGCGTCGATTGCATTGGAATTTTTCC
AAGTCAAACCTATCTAGTCT

Product: outer membrane lipoprotein carrier protein LolA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MAPKSLFAALALFVALAVGLPAGPASAQEARSILPQLTQDQRAFVARVEGYLNGVRRVQARFLQVSSTGNYAEGTVSISR
PNRMRLQYDPPADLLMVANGSQLVYYDRELDQVSYIGLDSTPLGVLLRDKIELSDPNITVTAYREAKGVVEIALVQTNDP
GQGTLTLVFTTDPLELRQWRVLDAQNVEVSVSLFNPQVGLALDPKLFVFSEKAERPQRDSR

Sequences:

>Translated_221_residues
MAPKSLFAALALFVALAVGLPAGPASAQEARSILPQLTQDQRAFVARVEGYLNGVRRVQARFLQVSSTGNYAEGTVSISR
PNRMRLQYDPPADLLMVANGSQLVYYDRELDQVSYIGLDSTPLGVLLRDKIELSDPNITVTAYREAKGVVEIALVQTNDP
GQGTLTLVFTTDPLELRQWRVLDAQNVEVSVSLFNPQVGLALDPKLFVFSEKAERPQRDSR
>Mature_220_residues
APKSLFAALALFVALAVGLPAGPASAQEARSILPQLTQDQRAFVARVEGYLNGVRRVQARFLQVSSTGNYAEGTVSISRP
NRMRLQYDPPADLLMVANGSQLVYYDRELDQVSYIGLDSTPLGVLLRDKIELSDPNITVTAYREAKGVVEIALVQTNDPG
QGTLTLVFTTDPLELRQWRVLDAQNVEVSVSLFNPQVGLALDPKLFVFSEKAERPQRDSR

Specific function: Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the l

COG id: COG2834

COG function: function code M; Outer membrane lipoprotein-sorting protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lolA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004564
- InterPro:   IPR018323 [H]

Pfam domain/function: PF03548 LolA [H]

EC number: NA

Molecular weight: Translated: 24289; Mature: 24158

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPKSLFAALALFVALAVGLPAGPASAQEARSILPQLTQDQRAFVARVEGYLNGVRRVQA
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
RFLQVSSTGNYAEGTVSISRPNRMRLQYDPPADLLMVANGSQLVYYDRELDQVSYIGLDS
HEEEEECCCCCCCEEEEEECCCEEEEEECCCCCEEEEECCCEEEEEECCCCCEEEECCCC
TPLGVLLRDKIELSDPNITVTAYREAKGVVEIALVQTNDPGQGTLTLVFTTDPLELRQWR
CCCCEEEEEEEEECCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEEECCCHHHHEEE
VLDAQNVEVSVSLFNPQVGLALDPKLFVFSEKAERPQRDSR
EECCCCCEEEEEEECCCCCEEECCEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
APKSLFAALALFVALAVGLPAGPASAQEARSILPQLTQDQRAFVARVEGYLNGVRRVQA
CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
RFLQVSSTGNYAEGTVSISRPNRMRLQYDPPADLLMVANGSQLVYYDRELDQVSYIGLDS
HEEEEECCCCCCCEEEEEECCCEEEEEECCCCCEEEEECCCEEEEEECCCCCEEEECCCC
TPLGVLLRDKIELSDPNITVTAYREAKGVVEIALVQTNDPGQGTLTLVFTTDPLELRQWR
CCCCEEEEEEEEECCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEEECCCHHHHEEE
VLDAQNVEVSVSLFNPQVGLALDPKLFVFSEKAERPQRDSR
EECCCCCEEEEEEECCCCCEEECCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA