| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is acsA1 [H]
Identifier: 83595024
GI number: 83595024
Start: 4240734
End: 4242740
Strand: Direct
Name: acsA1 [H]
Synonym: Rru_A3695
Alternate gene names: 83595024
Gene position: 4240734-4242740 (Clockwise)
Preceding gene: 83595023
Following gene: 83595031
Centisome position: 97.42
GC content: 66.42
Gene sequence:
>2007_bases GTGACAGAAAGCGAGCAGGCGGTGATTTCGGGTTTTGCCAAGGGCGAGCCGGCGCCGCCGCTGTGGACTCCCTCGGCCGA GCGCATCGCCGCCACCCGGCTTGACGCCTTCCGCCGCCGCATCGAAGAGCGCCACGGCGTCGTCCTGGCCGATTACGATG CCCTGTGGCAATGGTCGATCGATGCCCCGGCCGCCTTCTGGACCGAGGTCTGGGATTTTTGCGGGGTCATCGGCGATAAG GGCGACGGGCCGGTGGTCGATGATCCGGGCAAGCTTCCCGGCGCGCGCTGGTTCGCCGGCGCCCGGCTCAACGCCGCCGA AACCCTGCTCGCCCCCCATGCCCAGCGCCCGGGCGACGCCGTGGTCTTCCGCGTCGAGAACCATCCGACCCAACGCCTTG ATCTGCCGACGCTGCGCGCCCGGGTGTCGCTGGTTCAACAAGGCTTGCGCCGCGCTGGCGTCGGGGTTGGCGACCGGGTG GCGGGCTATCTGCCCAATATGCCCGAGGCCCTGATCGCCATGCTGGCGACCGCCGGCCTGGGGGCGGTGTGGTCTTCGGC CTCGCCGGATTTCGGCGCCCAGGGGGTGATCGACCGCTTCGGCCAGATCGAGCCCAAGGTGCTGTTCACGGTCGATGGCT ATTTTTACAACGGCAAGGTCCATGACTGCCGCGAGAAGGTCGCCACCCTGGTCAAGGCGGTGCCGTCGATCACCCAGGTG GTGGAAGTGGCCTTCGCCGGCAAGGGCGATGCGCCCGCTGCCATCCCCCGCGCCACGTCATGGGCGGCGTTCATCGGCGA TTTCACCGCCGGCGAGCCGGACTTCCTGCGGCTGCCCTTCGATCATCCGCTGTATATCCTGTATTCCAGCGGCACCACCG GCGTGCCAAAATGCATCGTTCACGGCCATGGCGGCACCTTGCTTCAGCAACTGAAGGAGCATGTGCTGCATGCCGATGCC CACCCCGGCGACCGGGTGTTCTATTTCACCACCTGCGGCTGGATGATGTGGAACTGGCTGGCCGCGGCCTTGGGGGCGGG CTGCACCGTGCTGCTTTATGACGGATCGCCGTTTTATCCCGATGGCGCCGTGCTGTGGGATTACGCCCAGGCCGAGGGCT GCACCTTCTTTGGCACCTCGGCCAAATGGATCGACGCCCAGCGCAAGGCCAGGTTGCGGCCTAGCGATACCCATGATCTG TCGACGGTGCGGGTGATCGCCTCCACCGGCTCGCCGCTCGCCCCGGAAAGCTTCGATTACGTCTACGACGCCATCAAAGG CGATGTGCAACTGGCCTCGATCTCGGGCGGCACCGATATCTTGTCGTGTTTCATGCTGGGCAGCCCAATTGATTCGGTGT TTCGCGGCGAGATCCAGAAGCGCGGCCTTGGCATGGCGGTGGCGGTTTTCGACGACGAGGGCCGGCCGCTGGTCGGCCAG AAGGGCGAACTGGTCTGCACCCGGGCCTTTCCCTCCAGCCCCATTGGGTTCTGGAACGATGCCGACGGGGCGAAGTTCAA GGCCGCCTATTTCGAGCGCTTCCCCGGGGTCTGGACCCATGGCGACTGGGTGGAATTGACCCCCCACGGCGGCATCGTCG TTTATGGCCGCTCGGATGCGACGCTCAATCCCGGCGGCGTGCGCATCGGCACCGCCGAGATCTATCGGCAGGTTGAAACC CTTGACGAGGTGCGCGAGGCCATCGTCATCGGCCAGGACTGGCAAGGCGATGTGCGGGTGGTGCTGTTCGTCGTGCTGCG CGACGGACTGACGCTGACGCCCGAGCTTGAGGACAAAATCAAGGCGCGGATCCGTCAATCCTGCACGCCGCGCCACGTGC CGGCCAAGGTGGTTCAGGTCAACGATATTCCCCGCACCAAATCCAACAAGATCGTGGAACTGGCGGTGCGCGAGGTCGTC CACGGCCGGCCGGTGCGCAACCGCGAGGCCCTGGCCAACCCCGAGGCGCTCGACGACTTCGCCGGACGCCCCGAACTGGC GGGATAG
Upstream 100 bases:
>100_bases TAAAACCCCAGGCTGTATTGCATTCACGACGGGGCGATACAATCTCCCTGACGGGGATGGCGCGGGTCGGGCCGCCCCCC ACCGTCAGGGAGGAGCGAAC
Downstream 100 bases:
>100_bases GGCTTAGCCCTTTGTTGGCGGGTCGATATGCACGATCACCGGCACATGGTCCGAGGGCGGGGTCCAGTCGCGGGTGTCGT CCATCACCTCCAGGCCGCGC
Product: acetoacetyl-CoA synthetase
Products: NA
Alternate protein names: Acetoacetate--CoA ligase 1; Acyl-activating enzyme 1 [H]
Number of amino acids: Translated: 668; Mature: 667
Protein sequence:
>668_residues MTESEQAVISGFAKGEPAPPLWTPSAERIAATRLDAFRRRIEERHGVVLADYDALWQWSIDAPAAFWTEVWDFCGVIGDK GDGPVVDDPGKLPGARWFAGARLNAAETLLAPHAQRPGDAVVFRVENHPTQRLDLPTLRARVSLVQQGLRRAGVGVGDRV AGYLPNMPEALIAMLATAGLGAVWSSASPDFGAQGVIDRFGQIEPKVLFTVDGYFYNGKVHDCREKVATLVKAVPSITQV VEVAFAGKGDAPAAIPRATSWAAFIGDFTAGEPDFLRLPFDHPLYILYSSGTTGVPKCIVHGHGGTLLQQLKEHVLHADA HPGDRVFYFTTCGWMMWNWLAAALGAGCTVLLYDGSPFYPDGAVLWDYAQAEGCTFFGTSAKWIDAQRKARLRPSDTHDL STVRVIASTGSPLAPESFDYVYDAIKGDVQLASISGGTDILSCFMLGSPIDSVFRGEIQKRGLGMAVAVFDDEGRPLVGQ KGELVCTRAFPSSPIGFWNDADGAKFKAAYFERFPGVWTHGDWVELTPHGGIVVYGRSDATLNPGGVRIGTAEIYRQVET LDEVREAIVIGQDWQGDVRVVLFVVLRDGLTLTPELEDKIKARIRQSCTPRHVPAKVVQVNDIPRTKSNKIVELAVREVV HGRPVRNREALANPEALDDFAGRPELAG
Sequences:
>Translated_668_residues MTESEQAVISGFAKGEPAPPLWTPSAERIAATRLDAFRRRIEERHGVVLADYDALWQWSIDAPAAFWTEVWDFCGVIGDK GDGPVVDDPGKLPGARWFAGARLNAAETLLAPHAQRPGDAVVFRVENHPTQRLDLPTLRARVSLVQQGLRRAGVGVGDRV AGYLPNMPEALIAMLATAGLGAVWSSASPDFGAQGVIDRFGQIEPKVLFTVDGYFYNGKVHDCREKVATLVKAVPSITQV VEVAFAGKGDAPAAIPRATSWAAFIGDFTAGEPDFLRLPFDHPLYILYSSGTTGVPKCIVHGHGGTLLQQLKEHVLHADA HPGDRVFYFTTCGWMMWNWLAAALGAGCTVLLYDGSPFYPDGAVLWDYAQAEGCTFFGTSAKWIDAQRKARLRPSDTHDL STVRVIASTGSPLAPESFDYVYDAIKGDVQLASISGGTDILSCFMLGSPIDSVFRGEIQKRGLGMAVAVFDDEGRPLVGQ KGELVCTRAFPSSPIGFWNDADGAKFKAAYFERFPGVWTHGDWVELTPHGGIVVYGRSDATLNPGGVRIGTAEIYRQVET LDEVREAIVIGQDWQGDVRVVLFVVLRDGLTLTPELEDKIKARIRQSCTPRHVPAKVVQVNDIPRTKSNKIVELAVREVV HGRPVRNREALANPEALDDFAGRPELAG >Mature_667_residues TESEQAVISGFAKGEPAPPLWTPSAERIAATRLDAFRRRIEERHGVVLADYDALWQWSIDAPAAFWTEVWDFCGVIGDKG DGPVVDDPGKLPGARWFAGARLNAAETLLAPHAQRPGDAVVFRVENHPTQRLDLPTLRARVSLVQQGLRRAGVGVGDRVA GYLPNMPEALIAMLATAGLGAVWSSASPDFGAQGVIDRFGQIEPKVLFTVDGYFYNGKVHDCREKVATLVKAVPSITQVV EVAFAGKGDAPAAIPRATSWAAFIGDFTAGEPDFLRLPFDHPLYILYSSGTTGVPKCIVHGHGGTLLQQLKEHVLHADAH PGDRVFYFTTCGWMMWNWLAAALGAGCTVLLYDGSPFYPDGAVLWDYAQAEGCTFFGTSAKWIDAQRKARLRPSDTHDLS TVRVIASTGSPLAPESFDYVYDAIKGDVQLASISGGTDILSCFMLGSPIDSVFRGEIQKRGLGMAVAVFDDEGRPLVGQK GELVCTRAFPSSPIGFWNDADGAKFKAAYFERFPGVWTHGDWVELTPHGGIVVYGRSDATLNPGGVRIGTAEIYRQVETL DEVREAIVIGQDWQGDVRVVLFVVLRDGLTLTPELEDKIKARIRQSCTPRHVPAKVVQVNDIPRTKSNKIVELAVREVVH GRPVRNREALANPEALDDFAGRPELAG
Specific function: Involved in poly-3-hydroxybutyrate degradation. Activates acetoacetate to acetoacetyl-CoA [H]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI31982927, Length=660, Percent_Identity=42.4242424242424, Blast_Score=568, Evalue=1e-162, Organism=Homo sapiens, GI8923896, Length=683, Percent_Identity=25.7686676427526, Blast_Score=173, Evalue=5e-43, Organism=Homo sapiens, GI28416953, Length=618, Percent_Identity=26.3754045307443, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI253970489, Length=696, Percent_Identity=25.2873563218391, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI13375727, Length=583, Percent_Identity=24.6998284734134, Blast_Score=140, Evalue=4e-33, Organism=Escherichia coli, GI1790505, Length=625, Percent_Identity=26.56, Blast_Score=186, Evalue=4e-48, Organism=Escherichia coli, GI1786529, Length=634, Percent_Identity=24.1324921135647, Blast_Score=123, Evalue=4e-29, Organism=Caenorhabditis elegans, GI17569507, Length=655, Percent_Identity=37.4045801526718, Blast_Score=437, Evalue=1e-123, Organism=Caenorhabditis elegans, GI71983001, Length=652, Percent_Identity=25.7668711656442, Blast_Score=142, Evalue=7e-34, Organism=Caenorhabditis elegans, GI71982997, Length=652, Percent_Identity=25.7668711656442, Blast_Score=142, Evalue=8e-34, Organism=Saccharomyces cerevisiae, GI6319264, Length=641, Percent_Identity=26.3650546021841, Blast_Score=183, Evalue=8e-47, Organism=Saccharomyces cerevisiae, GI6323182, Length=656, Percent_Identity=26.0670731707317, Blast_Score=182, Evalue=2e-46, Organism=Drosophila melanogaster, GI24667955, Length=661, Percent_Identity=25.4160363086233, Blast_Score=176, Evalue=6e-44, Organism=Drosophila melanogaster, GI62472339, Length=574, Percent_Identity=25.7839721254355, Blast_Score=160, Evalue=3e-39, Organism=Drosophila melanogaster, GI24667959, Length=529, Percent_Identity=25.1417769376182, Blast_Score=142, Evalue=8e-34, Organism=Drosophila melanogaster, GI21355225, Length=642, Percent_Identity=24.6105919003115, Blast_Score=122, Evalue=6e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005914 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.16 [H]
Molecular weight: Translated: 72593; Mature: 72462
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESEQAVISGFAKGEPAPPLWTPSAERIAATRLDAFRRRIEERHGVVLADYDALWQWSI CCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECHHEEEECC DAPAAFWTEVWDFCGVIGDKGDGPVVDDPGKLPGARWFAGARLNAAETLLAPHAQRPGDA CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHCCCCCCCCCE VVFRVENHPTQRLDLPTLRARVSLVQQGLRRAGVGVGDRVAGYLPNMPEALIAMLATAGL EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHCC GAVWSSASPDFGAQGVIDRFGQIEPKVLFTVDGYFYNGKVHDCREKVATLVKAVPSITQV HHHHCCCCCCCCCCHHHHHHCCCCCEEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHH VEVAFAGKGDAPAAIPRATSWAAFIGDFTAGEPDFLRLPFDHPLYILYSSGTTGVPKCIV HHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEECCCCCCEEEEECCCCCCCCEEEE HGHGGTLLQQLKEHVLHADAHPGDRVFYFTTCGWMMWNWLAAALGAGCTVLLYDGSPFYP ECCCHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCC DGAVLWDYAQAEGCTFFGTSAKWIDAQRKARLRPSDTHDLSTVRVIASTGSPLAPESFDY CCCEEEEECCCCCCEEECCCCHHHCHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHH VYDAIKGDVQLASISGGTDILSCFMLGSPIDSVFRGEIQKRGLGMAVAVFDDEGRPLVGQ HHHHHCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC KGELVCTRAFPSSPIGFWNDADGAKFKAAYFERFPGVWTHGDWVELTPHGGIVVYGRSDA CCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCEEEECCCCC TLNPGGVRIGTAEIYRQVETLDEVREAIVIGQDWQGDVRVVLFVVLRDGLTLTPELEDKI EECCCCEEECHHHHHHHHHHHHHHHHHEEECCCCCCCHHHEEEEEHHCCCEECCCHHHHH KARIRQSCTPRHVPAKVVQVNDIPRTKSNKIVELAVREVVHGRPVRNREALANPEALDDF HHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCHHHHHH AGRPELAG CCCCCCCC >Mature Secondary Structure TESEQAVISGFAKGEPAPPLWTPSAERIAATRLDAFRRRIEERHGVVLADYDALWQWSI CCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECHHEEEECC DAPAAFWTEVWDFCGVIGDKGDGPVVDDPGKLPGARWFAGARLNAAETLLAPHAQRPGDA CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHCCCCCCCCCE VVFRVENHPTQRLDLPTLRARVSLVQQGLRRAGVGVGDRVAGYLPNMPEALIAMLATAGL EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHCC GAVWSSASPDFGAQGVIDRFGQIEPKVLFTVDGYFYNGKVHDCREKVATLVKAVPSITQV HHHHCCCCCCCCCCHHHHHHCCCCCEEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHH VEVAFAGKGDAPAAIPRATSWAAFIGDFTAGEPDFLRLPFDHPLYILYSSGTTGVPKCIV HHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEECCCCCCEEEEECCCCCCCCEEEE HGHGGTLLQQLKEHVLHADAHPGDRVFYFTTCGWMMWNWLAAALGAGCTVLLYDGSPFYP ECCCHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCC DGAVLWDYAQAEGCTFFGTSAKWIDAQRKARLRPSDTHDLSTVRVIASTGSPLAPESFDY CCCEEEEECCCCCCEEECCCCHHHCHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHH VYDAIKGDVQLASISGGTDILSCFMLGSPIDSVFRGEIQKRGLGMAVAVFDDEGRPLVGQ HHHHHCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC KGELVCTRAFPSSPIGFWNDADGAKFKAAYFERFPGVWTHGDWVELTPHGGIVVYGRSDA CCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCEEEECCCCC TLNPGGVRIGTAEIYRQVETLDEVREAIVIGQDWQGDVRVVLFVVLRDGLTLTPELEDKI EECCCCEEECHHHHHHHHHHHHHHHHHEEECCCCCCCHHHEEEEEHHCCCEECCCHHHHH KARIRQSCTPRHVPAKVVQVNDIPRTKSNKIVELAVREVVHGRPVRNREALANPEALDDF HHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCHHHHHH AGRPELAG CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10735852; 11481430 [H]