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The map label for this gene is yceJ [H]

Identifier: 83595011

GI number: 83595011

Start: 4229853

End: 4230419

Strand: Direct

Name: yceJ [H]

Synonym: Rru_A3682

Alternate gene names: 83595011

Gene position: 4229853-4230419 (Clockwise)

Preceding gene: 83595010

Following gene: 83595012

Centisome position: 97.17

GC content: 67.2

Gene sequence:

>567_bases
ATGGCCCTTCCCTTCGGCGACGAGGCCGCGCGCTACGGCGCGGTCAGCCGGATCGCCCATTGGCTTACCGCCCTTGCGGT
TATCGCATTGATCGGCCTGGGCTGGGTCATGGCCGACCTGCCTTTGGGTGCCCAAAAGCTCGAGCTTTACGCCCTGCATA
AATCGATCGGCGCCCTGGTGCTGATGGTGACCCTGGCCCGCCTGGGCTGGCGCTTGGCGCAACGCGGTCCAAGCGGCCAT
GCCGAGCATGCGCCCTGGGAACGGGTGATGGCCAAGGCCGCCCATGTCGGCCTTTATGCCGGCCTGCTGGCCATGCCGCT
GACCGGTTGGATCGCCAGTTCGGCGGCCAATTTCCCGGTCAGCGTCTTTGGGCTGTTCACCCTGCCCAATCTTGTCGCTC
CCGATCAGGCCCTGCGCGAAGCCGCCGCCACGCTTCATGGCGCCCTGGCCTGGGGGGTGGTTGGGCTGATCGTTCTTCAC
GCCGCCGGGGCGGTGAAACATCACCTGATCGACCGCGACGATACGCTGCGGCGCATGCTTCCCCTCGCCCGCCGCCCTTC
CCGATAA

Upstream 100 bases:

>100_bases
CATCACCACCTATTCGCCCAACATCGGCGAGGACGTGGTGATCGAGATCCAGTTGGAAGGCCAGCGGTCCTAAGGTTTCG
TTCTTTTAGGAGGATCGGTC

Downstream 100 bases:

>100_bases
GGACTTGCCAGAATGATCCCCCGTTCCGTTTCCCGGCTGTTCGCCCTGGCGCTTTTCGCCTCCCTCGGCGCCCTGCCCAA
GCCCGGCTTCGCCGCCGATC

Product: cytochrome B561

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MALPFGDEAARYGAVSRIAHWLTALAVIALIGLGWVMADLPLGAQKLELYALHKSIGALVLMVTLARLGWRLAQRGPSGH
AEHAPWERVMAKAAHVGLYAGLLAMPLTGWIASSAANFPVSVFGLFTLPNLVAPDQALREAAATLHGALAWGVVGLIVLH
AAGAVKHHLIDRDDTLRRMLPLARRPSR

Sequences:

>Translated_188_residues
MALPFGDEAARYGAVSRIAHWLTALAVIALIGLGWVMADLPLGAQKLELYALHKSIGALVLMVTLARLGWRLAQRGPSGH
AEHAPWERVMAKAAHVGLYAGLLAMPLTGWIASSAANFPVSVFGLFTLPNLVAPDQALREAAATLHGALAWGVVGLIVLH
AAGAVKHHLIDRDDTLRRMLPLARRPSR
>Mature_187_residues
ALPFGDEAARYGAVSRIAHWLTALAVIALIGLGWVMADLPLGAQKLELYALHKSIGALVLMVTLARLGWRLAQRGPSGHA
EHAPWERVMAKAAHVGLYAGLLAMPLTGWIASSAANFPVSVFGLFTLPNLVAPDQALREAAATLHGALAWGVVGLIVLHA
AGAVKHHLIDRDDTLRRMLPLARRPSR

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b561 family [H]

Homologues:

Organism=Escherichia coli, GI1787296, Length=179, Percent_Identity=39.1061452513966, Blast_Score=120, Evalue=6e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 20060; Mature: 19929

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPFGDEAARYGAVSRIAHWLTALAVIALIGLGWVMADLPLGAQKLELYALHKSIGALV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LMVTLARLGWRLAQRGPSGHAEHAPWERVMAKAAHVGLYAGLLAMPLTGWIASSAANFPV
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SVFGLFTLPNLVAPDQALREAAATLHGALAWGVVGLIVLHAAGAVKHHLIDRDDTLRRML
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
PLARRPSR
HHHCCCCC
>Mature Secondary Structure 
ALPFGDEAARYGAVSRIAHWLTALAVIALIGLGWVMADLPLGAQKLELYALHKSIGALV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LMVTLARLGWRLAQRGPSGHAEHAPWERVMAKAAHVGLYAGLLAMPLTGWIASSAANFPV
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SVFGLFTLPNLVAPDQALREAAATLHGALAWGVVGLIVLHAAGAVKHHLIDRDDTLRRML
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
PLARRPSR
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]