Click here to switch to the map view.

The map label for this gene is yxiO [H]

Identifier: 83594990

GI number: 83594990

Start: 4203246

End: 4204526

Strand: Reverse

Name: yxiO [H]

Synonym: Rru_A3661

Alternate gene names: 83594990

Gene position: 4204526-4203246 (Counterclockwise)

Preceding gene: 83594991

Following gene: 83594989

Centisome position: 96.59

GC content: 68.93

Gene sequence:

>1281_bases
GTGACCGGGGGCGCCGCCGCTGCGCCGCCCGGTCGCGGCGCGGCTTTTTCGTGGTGCCTGTTCGATTTCGCCAATTCGGG
CTATCCCACCGTCGTCGCCACCTTCGTTTTTTCGGCCTATGTGACCAAGGCGGTGGCGGCGACGCCCGAAGCGGGAACGG
CGGCCTGGGGTTATGCCATGGGCGCTTCGGGGCTGCTGATCGCCCTGCTCGCCCCGATCTTCGGCGCCGTGGCCGACCAC
AGCGGCCGGCGCAAGCCTTGGCTTGGCCTGTTCAGTCTGCTGTGCGTCGCCTCCACCGCCTTGATGTGGACGATCCGCCC
CGACCCGGCCTTCCTGTTGGCCGCCCTGGTGCTGGCGGCGCTGTCGAACGCCGCCTTCGAGATCGGCGGCGTCTTCTACA
ACGCCATGTTGCCCGATGTGACGACGCCCGAGCGCATGGGCCGCCTTTCGGGCTGGGCCTGGGGGTTGGGCTATGCCGGC
GGGCTGGCCTGTCTGGTCATCGCCCTGCTCGCCCTGGTTCAGGCCGATCCGCCGCCCTTCGGCCTGGACAAGGCCGCCGC
CGAGCCGGTGCGCGCCACCCTGGTGCTGGTCGCCCTGTGGTTCGTGGTTTTCGGCTGGCCGCTGTTCGCCTTCGTGCCCG
AGCGGCCGACCGGGCGGGTTCTGGCCTTGGGCGCGGCGGCGCGCGGGGCGATTGACAGCCTGAAGGGCCTGCCGGCGCTG
TTTCGCGGCGATCCCCGGCTGGGCTGGTTTCTGCTGGCGCGCATGCTCTACACCGAAGGGCTGAACACCCTGTTCGCCTT
TGGCGGCATCTATGCCGCCGGCACCTTCGACATGGGCTTTGATCAGATCATCGTGTTTGGCATCGGGCTGAACATCACCG
CCGGGCTGGGGGCCTTCGCCTTTGGCTGGATCGACGACTGGCTGGGCTCGCCGCGCACCATCGTTGTCGGCCTGATCGGC
CTGATCGGTTTTTGCGTCGCCGTTCTTCTGGTCGAAGACACCGCATGGTTCGTCGGTCTGGCTTTGACCATGGGGATTTT
CTTCGGCCCGGTGCAGGCAGCCAGCCGCACCCATATCGCCCGCGTCGCCCCGCCCGACAGGCGCGGCGAATTATTCGGGC
TTTTCGCCCTGACCGGCAAGATCAGCGCCTTCGCCGGACCGCTGGCCGTCGGTCTGGCGACCGATCTAAGCGGCAGTCAG
CGCCTCGGCATGGCCACCGTGGTGGTTTTCCTGGTCGCCGGCCTCGGCCTGCTGGTCAAGACCCGCGCCCCCCGGGGCTG
A

Upstream 100 bases:

>100_bases
CCCCCTCGGGCCTGACCTATGAGACCGGCGTGCGCGACAAGGTGCTGCACAACGCCGCCCACGGCGCCGAGTCCCATTGA
CGACAGCCCGACCGCGGCCC

Downstream 100 bases:

>100_bases
CCCCGGCCCTTTCCCCCCGTCCTTTCCCGCCCATTTCCATTGCCTACCCCCGAAGGGCGGCGTACAAACCGCCCCATGAA
GGATACCGCCACCGCCACGC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MTGGAAAAPPGRGAAFSWCLFDFANSGYPTVVATFVFSAYVTKAVAATPEAGTAAWGYAMGASGLLIALLAPIFGAVADH
SGRRKPWLGLFSLLCVASTALMWTIRPDPAFLLAALVLAALSNAAFEIGGVFYNAMLPDVTTPERMGRLSGWAWGLGYAG
GLACLVIALLALVQADPPPFGLDKAAAEPVRATLVLVALWFVVFGWPLFAFVPERPTGRVLALGAAARGAIDSLKGLPAL
FRGDPRLGWFLLARMLYTEGLNTLFAFGGIYAAGTFDMGFDQIIVFGIGLNITAGLGAFAFGWIDDWLGSPRTIVVGLIG
LIGFCVAVLLVEDTAWFVGLALTMGIFFGPVQAASRTHIARVAPPDRRGELFGLFALTGKISAFAGPLAVGLATDLSGSQ
RLGMATVVVFLVAGLGLLVKTRAPRG

Sequences:

>Translated_426_residues
MTGGAAAAPPGRGAAFSWCLFDFANSGYPTVVATFVFSAYVTKAVAATPEAGTAAWGYAMGASGLLIALLAPIFGAVADH
SGRRKPWLGLFSLLCVASTALMWTIRPDPAFLLAALVLAALSNAAFEIGGVFYNAMLPDVTTPERMGRLSGWAWGLGYAG
GLACLVIALLALVQADPPPFGLDKAAAEPVRATLVLVALWFVVFGWPLFAFVPERPTGRVLALGAAARGAIDSLKGLPAL
FRGDPRLGWFLLARMLYTEGLNTLFAFGGIYAAGTFDMGFDQIIVFGIGLNITAGLGAFAFGWIDDWLGSPRTIVVGLIG
LIGFCVAVLLVEDTAWFVGLALTMGIFFGPVQAASRTHIARVAPPDRRGELFGLFALTGKISAFAGPLAVGLATDLSGSQ
RLGMATVVVFLVAGLGLLVKTRAPRG
>Mature_425_residues
TGGAAAAPPGRGAAFSWCLFDFANSGYPTVVATFVFSAYVTKAVAATPEAGTAAWGYAMGASGLLIALLAPIFGAVADHS
GRRKPWLGLFSLLCVASTALMWTIRPDPAFLLAALVLAALSNAAFEIGGVFYNAMLPDVTTPERMGRLSGWAWGLGYAGG
LACLVIALLALVQADPPPFGLDKAAAEPVRATLVLVALWFVVFGWPLFAFVPERPTGRVLALGAAARGAIDSLKGLPALF
RGDPRLGWFLLARMLYTEGLNTLFAFGGIYAAGTFDMGFDQIIVFGIGLNITAGLGAFAFGWIDDWLGSPRTIVVGLIGL
IGFCVAVLLVEDTAWFVGLALTMGIFFGPVQAASRTHIARVAPPDRRGELFGLFALTGKISAFAGPLAVGLATDLSGSQR
LGMATVVVFLVAGLGLLVKTRAPRG

Specific function: Unknown

COG id: COG2270

COG function: function code R; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44293; Mature: 44161

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCC
>Mature Secondary Structure 
TGGAAAAPPGRGAAFSWCLFDFANSGYPTVVATFVFSAYVTKAVAATPEAGTAAWGYAM
CCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
GASGLLIALLAPIFGAVADHSGRRKPWLGLFSLLCVASTALMWTIRPDPAFLLAALVLAA
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHH
LSNAAFEIGGVFYNAMLPDVTTPERMGRLSGWAWGLGYAGGLACLVIALLALVQADPPPF
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GLDKAAAEPVRATLVLVALWFVVFGWPLFAFVPERPTGRVLALGAAARGAIDSLKGLPAL
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHCCCHH
FRGDPRLGWFLLARMLYTEGLNTLFAFGGIYAAGTFDMGFDQIIVFGIGLNITAGLGAFA
HCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCHHEEEEEEECCCHHHHHHHHH
FGWIDDWLGSPRTIVVGLIGLIGFCVAVLLVEDTAWFVGLALTMGIFFGPVQAASRTHIA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
RVAPPDRRGELFGLFALTGKISAFAGPLAVGLATDLSGSQRLGMATVVVFLVAGLGLLVK
ECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEE
TRAPRG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]