Click here to switch to the map view.

The map label for this gene is yvrH [H]

Identifier: 83594967

GI number: 83594967

Start: 4179419

End: 4180231

Strand: Direct

Name: yvrH [H]

Synonym: Rru_A3638

Alternate gene names: 83594967

Gene position: 4179419-4180231 (Clockwise)

Preceding gene: 83594963

Following gene: 83594971

Centisome position: 96.02

GC content: 68.39

Gene sequence:

>813_bases
ATGGAAAGGCCGCGTCCTTGCGAGGGCCCCGGGGGCCGCGCCGCCCGCGCCAGCTTATGTACCAAAAACACCTCGGCGAT
GGTATCAAGGACCCTGCGGAAAGAACGGAGAGTGCAACAAACCATGACGTCCGGCAAGCGCCTGCTCCTGGTTGTCGAAG
ACGACAGTTTTCGTCGCGCGCTGGGGGAGCAACTGCGCGCCCAGGAGGATTTCGGCCCCGTCGACGAGGTGACCTCGCTG
GCCCAGGCCCTGGAGCGAGCGGCGACCGCGGTCTTCGATCTGCTGCTGGTCGATCTGGGGGCCGGGGAGGGCGCCGGGGG
CGGAGAAACGGTGTGCCGGGCCCTGCGCGAGGCCGGGATCGAAGCGCCGCTGGTCCTTCTGGCCGGCCCCGGAGCCCCGC
CGCCGCCTACCGATCTGGGACCGGTCGAAAGGGTCGACAAGCCGGTGCGCCTGGGCGCGCTGCTTGCCCTGCTGCGGGCG
CGGATGAAGGCGAAGGAGGGCGGAGGCGAGGAAAGCTTCATCGTTGGCCCTTACCGTTTCCAGCCCGCCGACAAGATGCT
GGTCGGCCCCGGGGAGGGGCGCAGCCTGCGCCTGACCGAAAAGGAAACCGGCATCCTGGCCTTCCTATGCCGGGCCGGCG
GCAAGGCGGTTGACCGCGAGACCCTGCTTCACGAGGTATGGGGCTATGGCGCCGGCATCACCACCCACACCCTGGAAACC
CACATCTATCGCCTGCGGCGCAAGATGGAGGCCGATCCGGTCAAAGCCCGCGTGCTGCTGACCGAAGACGGCGGCTATCG
GTTGGGATCGTAA

Upstream 100 bases:

>100_bases
TTATCGGTCACGGAACCTGTCCAACTTGGGTGCGAAAAGCCGCGCCGGAAAAAGGCGCCGGGTCGGGGGCCGGCTCATAG
ATAGGGCGGGGAGGGGGGCT

Downstream 100 bases:

>100_bases
GCGAGAAGGGCGGCGGTCAGGGCGTTGAGCACCGCCATCCCGGCGCCGGTCGCCCGCAGAACGCCCGGGGCGGGGCGGTG
GAGCAGGCCTTCTTCGCTGG

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MERPRPCEGPGGRAARASLCTKNTSAMVSRTLRKERRVQQTMTSGKRLLLVVEDDSFRRALGEQLRAQEDFGPVDEVTSL
AQALERAATAVFDLLLVDLGAGEGAGGGETVCRALREAGIEAPLVLLAGPGAPPPPTDLGPVERVDKPVRLGALLALLRA
RMKAKEGGGEESFIVGPYRFQPADKMLVGPGEGRSLRLTEKETGILAFLCRAGGKAVDRETLLHEVWGYGAGITTHTLET
HIYRLRRKMEADPVKARVLLTEDGGYRLGS

Sequences:

>Translated_270_residues
MERPRPCEGPGGRAARASLCTKNTSAMVSRTLRKERRVQQTMTSGKRLLLVVEDDSFRRALGEQLRAQEDFGPVDEVTSL
AQALERAATAVFDLLLVDLGAGEGAGGGETVCRALREAGIEAPLVLLAGPGAPPPPTDLGPVERVDKPVRLGALLALLRA
RMKAKEGGGEESFIVGPYRFQPADKMLVGPGEGRSLRLTEKETGILAFLCRAGGKAVDRETLLHEVWGYGAGITTHTLET
HIYRLRRKMEADPVKARVLLTEDGGYRLGS
>Mature_270_residues
MERPRPCEGPGGRAARASLCTKNTSAMVSRTLRKERRVQQTMTSGKRLLLVVEDDSFRRALGEQLRAQEDFGPVDEVTSL
AQALERAATAVFDLLLVDLGAGEGAGGGETVCRALREAGIEAPLVLLAGPGAPPPPTDLGPVERVDKPVRLGALLALLRA
RMKAKEGGGEESFIVGPYRFQPADKMLVGPGEGRSLRLTEKETGILAFLCRAGGKAVDRETLLHEVWGYGAGITTHTLET
HIYRLRRKMEADPVKARVLLTEDGGYRLGS

Specific function: Member of the two-component regulatory system YvrG/YvrH that positively regulates 7 transcriptional units (wprA, wapA- yxxG, dltABCDE, sunA, sunT-bdbA-yolJ-bdbB, sigO-rsoA, and sigX- rsiX), and negatively regulates the lytABC operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790552, Length=223, Percent_Identity=29.1479820627803, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1786911, Length=229, Percent_Identity=31.0043668122271, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 29064; Mature: 29064

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERPRPCEGPGGRAARASLCTKNTSAMVSRTLRKERRVQQTMTSGKRLLLVVEDDSFRRA
CCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHH
LGEQLRAQEDFGPVDEVTSLAQALERAATAVFDLLLVDLGAGEGAGGGETVCRALREAGI
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
EAPLVLLAGPGAPPPPTDLGPVERVDKPVRLGALLALLRARMKAKEGGGEESFIVGPYRF
CCCEEEEECCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCEEE
QPADKMLVGPGEGRSLRLTEKETGILAFLCRAGGKAVDRETLLHEVWGYGAGITTHTLET
CCCCCEEECCCCCCEEEEECHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
HIYRLRRKMEADPVKARVLLTEDGGYRLGS
HHHHHHHHHCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MERPRPCEGPGGRAARASLCTKNTSAMVSRTLRKERRVQQTMTSGKRLLLVVEDDSFRRA
CCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHH
LGEQLRAQEDFGPVDEVTSLAQALERAATAVFDLLLVDLGAGEGAGGGETVCRALREAGI
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
EAPLVLLAGPGAPPPPTDLGPVERVDKPVRLGALLALLRARMKAKEGGGEESFIVGPYRF
CCCEEEEECCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCEEE
QPADKMLVGPGEGRSLRLTEKETGILAFLCRAGGKAVDRETLLHEVWGYGAGITTHTLET
CCCCCEEECCCCCCEEEEECHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
HIYRLRRKMEADPVKARVLLTEDGGYRLGS
HHHHHHHHHCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]