| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594902
Identifier: 83594902
GI number: 83594902
Start: 4117656
End: 4118063
Strand: Direct
Name: 83594902
Synonym: Rru_A3573
Alternate gene names: NA
Gene position: 4117656-4118063 (Clockwise)
Preceding gene: 83594901
Following gene: 83594903
Centisome position: 94.6
GC content: 61.03
Gene sequence:
>408_bases ATGGCCTATTGGCTGGTGAAATCCGAACCGTCCACTTGGTCGTGGCAGAATCAGCTCGACAAGGGAATCGAACATTGGGA TGGCGTGCGCAACCATCAGGCCTCCAACCACATGAAGGCCATGCGGCTGGGCGATCAGGCCTTTTTCTATCATTCGGTCA ATGAGAAGCGAATCGTCGGCATCGTCGAGGTGGTAAAGGAATACTACCCCGACCCGACCGATCCCGCCCACCGCTTCGGC ATGGTCGATTTCAAGGCCCTTCACACCCTGCCAACGCCGGTGACCCTGGCCATGATCAAGGCCGATCCCCGGCTTTCCCA CCTTGGGCTGGTGCGCCAGTCGCGGCTGTCGGTCTCATCGGTCGACGAGGCGTCCTGGGGGCTGATCCGCGGCCTGGGCG GGCTTTAG
Upstream 100 bases:
>100_bases TTATGGCAAGGCCGGGCTGTTCGAGGCGGTGATCATCCGCCCCTATAAGATCGTTCTGGGTACCCGCGCCGGCTGACATC CTTCTTAAGAGAGGTGGCGA
Downstream 100 bases:
>100_bases CCCATGGCCGCCGCCCGGTCCGTCCAGGCGCTGTGCGCCTTGGCCGATTTGGGCGATCCGGGAGCGCGCGGGCTGAGGGT GAGCGATGGCGACGGCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MAYWLVKSEPSTWSWQNQLDKGIEHWDGVRNHQASNHMKAMRLGDQAFFYHSVNEKRIVGIVEVVKEYYPDPTDPAHRFG MVDFKALHTLPTPVTLAMIKADPRLSHLGLVRQSRLSVSSVDEASWGLIRGLGGL
Sequences:
>Translated_135_residues MAYWLVKSEPSTWSWQNQLDKGIEHWDGVRNHQASNHMKAMRLGDQAFFYHSVNEKRIVGIVEVVKEYYPDPTDPAHRFG MVDFKALHTLPTPVTLAMIKADPRLSHLGLVRQSRLSVSSVDEASWGLIRGLGGL >Mature_134_residues AYWLVKSEPSTWSWQNQLDKGIEHWDGVRNHQASNHMKAMRLGDQAFFYHSVNEKRIVGIVEVVKEYYPDPTDPAHRFGM VDFKALHTLPTPVTLAMIKADPRLSHLGLVRQSRLSVSSVDEASWGLIRGLGGL
Specific function: Unknown
COG id: COG2947
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI83267861, Length=170, Percent_Identity=30.5882352941176, Blast_Score=77, Evalue=4e-15, Organism=Homo sapiens, GI40806221, Length=170, Percent_Identity=30.5882352941176, Blast_Score=77, Evalue=4e-15, Organism=Homo sapiens, GI7661804, Length=170, Percent_Identity=30.5882352941176, Blast_Score=77, Evalue=4e-15, Organism=Homo sapiens, GI83267859, Length=89, Percent_Identity=42.6966292134831, Blast_Score=74, Evalue=4e-14, Organism=Homo sapiens, GI40806219, Length=89, Percent_Identity=42.6966292134831, Blast_Score=74, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15326; Mature: 15194
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYWLVKSEPSTWSWQNQLDKGIEHWDGVRNHQASNHMKAMRLGDQAFFYHSVNEKRIVG CEEEEEECCCCCCCHHHHHHHHHHHHCCHHCCCHHHHHHHHHHCCHHEEEECCCCCHHHH IVEVVKEYYPDPTDPAHRFGMVDFKALHTLPTPVTLAMIKADPRLSHLGLVRQSRLSVSS HHHHHHHHCCCCCCHHHHCCCCHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCC VDEASWGLIRGLGGL CCCHHHHHHHCCCCC >Mature Secondary Structure AYWLVKSEPSTWSWQNQLDKGIEHWDGVRNHQASNHMKAMRLGDQAFFYHSVNEKRIVG EEEEEECCCCCCCHHHHHHHHHHHHCCHHCCCHHHHHHHHHHCCHHEEEECCCCCHHHH IVEVVKEYYPDPTDPAHRFGMVDFKALHTLPTPVTLAMIKADPRLSHLGLVRQSRLSVSS HHHHHHHHCCCCCCHHHHCCCCHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCC VDEASWGLIRGLGGL CCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA