| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594895
Identifier: 83594895
GI number: 83594895
Start: 4109800
End: 4111101
Strand: Reverse
Name: 83594895
Synonym: Rru_A3566
Alternate gene names: NA
Gene position: 4111101-4109800 (Counterclockwise)
Preceding gene: 83594896
Following gene: 83594894
Centisome position: 94.45
GC content: 69.28
Gene sequence:
>1302_bases ATGCTCCGCATCCTGTTGTTCGTCCTGCTTGCGGGACTTCTGGTGATCGGGGCGGTTTGGATCGCCGAGCACCCCGGCAT CGTCGCCCTGAACTGGCTGGGGTGGCATATCGAAACCTCGATCATGGTGCTGCTGATCACGTTGGTGGTGCTGATCGGCC TGCTGCTGTTCTTCTCGCGCTTCTTCGGCGGCATTCTGGGGATCCCCCAGTGGTGGCGTCGTCGTCGCAACGAGAAGAAG CTGCGGCGCGGCAGTCTGGCGGTGGGCGAAGGCATCGCCGCCGCCCGTGGGGGTGACGTCCATCTGGCGCGCAAGCTGCT CAAGGACGCCGAGCGTCTGTTGCCCGGCGCCGCCGGAACCCAGCAGTTGACCGCCGATACGGCCGCCGCCGCCGGGGAAA CCGACGTCGCCGAAAAAGCGTACGGTCTGATGCTGGAAAATCCCCGCACCCAGGCCAGCGGCCGGCGCGGCCTGCTTGAT CTCGCCCTGACGCGCGGTGATCTCGACAAGGCCTATGCCATCGTCCGCGAGGCGGTGGCGACCGGCGTCGATGCCCCCTG GGCGACGGCGACGTTGTTCCGTCTGCAGCTGTTGCGCCGCCAGTGGGCCGATGCCGAATCGACCCTCGCCAAGGCGGGGA ATGGCGTTCTCAAGCCCGGCGACGATGCCAAGGTGGTCAAGGCCGCCCTGCTGACCGTCCAGGCCCGCGACGCCGAACTG CCCGGTCGCGGCGGTGACGCCCTGCGGCTGTCCCAGCAGGCGGTCGAGCTTGATCCGACCTCGCGCGAAGCCACCCTGAT CGCTGCCCGCCAATTGGCGGCGACCGGACGCCAGCGCAAGGCCGCCCAGCTGCTGATCGCGCTGTGGGCCAAGCATCCCC ATCCGTCTCTGGCCCAGGCCTATCTGGCGCTGTGGACGGGCGAGGATTCGCTCAAGATCGTCCGCCACGCCCAGGAACTG ACCGGCGCCAATCCCGAGCATCCGATGAGCCGGCGGGTCTTCGCCGAAGCGGCCCTCGATGCCCAGTTGTGGGGGGAAGC CCGGCAGTCGCTGGAGCCGCTGCTGCGCGACGTGCCCTCGGCGACCATCTGCCGCCTGATGGCGCGGCTGGAAGAAGGCG AAAAGGGCGATGTCACGGCCGCCAACCAATGGCTGCGCCGGGCCCTGGAAGCCGGACCGGAGGTCGAGGAGGACGGCGTG ACCGCCCTGGCCGTGCTCGAATCCGCCTGCTCGCCCTTCGGGACGATCGCCGCCGCCGAACGCAAGGCGAGCGGCGGACG CGATCTCGCCCTGGCGAGCTGA
Upstream 100 bases:
>100_bases GCCGAAGCCGCGCTGTCGGATCTGACGGCCCAGGCCCTCGCCCGCATCGGCGCGGTGAACGCCACCGAGCCGGCCACTCC GGGCACGGAAGGGTAAGCCC
Downstream 100 bases:
>100_bases TCGGCTTGGCTCCTCTCCCCTTCTCCCTTCCCCAAGGGAGAAGGGGACGCCCGCGGGTGATGGTTCCCTCCCCCTAAGGG CAAGGAAACGGGCCGATGCT
Product: HemY-like
Products: NA
Alternate protein names: HemY Domain Protein; HemY-Like; HemY Protein; HemY N-Terminal Domain Protein; Hypthetical Protein Contains N-Terminal HemY Domain; Signal Peptide
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MLRILLFVLLAGLLVIGAVWIAEHPGIVALNWLGWHIETSIMVLLITLVVLIGLLLFFSRFFGGILGIPQWWRRRRNEKK LRRGSLAVGEGIAAARGGDVHLARKLLKDAERLLPGAAGTQQLTADTAAAAGETDVAEKAYGLMLENPRTQASGRRGLLD LALTRGDLDKAYAIVREAVATGVDAPWATATLFRLQLLRRQWADAESTLAKAGNGVLKPGDDAKVVKAALLTVQARDAEL PGRGGDALRLSQQAVELDPTSREATLIAARQLAATGRQRKAAQLLIALWAKHPHPSLAQAYLALWTGEDSLKIVRHAQEL TGANPEHPMSRRVFAEAALDAQLWGEARQSLEPLLRDVPSATICRLMARLEEGEKGDVTAANQWLRRALEAGPEVEEDGV TALAVLESACSPFGTIAAAERKASGGRDLALAS
Sequences:
>Translated_433_residues MLRILLFVLLAGLLVIGAVWIAEHPGIVALNWLGWHIETSIMVLLITLVVLIGLLLFFSRFFGGILGIPQWWRRRRNEKK LRRGSLAVGEGIAAARGGDVHLARKLLKDAERLLPGAAGTQQLTADTAAAAGETDVAEKAYGLMLENPRTQASGRRGLLD LALTRGDLDKAYAIVREAVATGVDAPWATATLFRLQLLRRQWADAESTLAKAGNGVLKPGDDAKVVKAALLTVQARDAEL PGRGGDALRLSQQAVELDPTSREATLIAARQLAATGRQRKAAQLLIALWAKHPHPSLAQAYLALWTGEDSLKIVRHAQEL TGANPEHPMSRRVFAEAALDAQLWGEARQSLEPLLRDVPSATICRLMARLEEGEKGDVTAANQWLRRALEAGPEVEEDGV TALAVLESACSPFGTIAAAERKASGGRDLALAS >Mature_433_residues MLRILLFVLLAGLLVIGAVWIAEHPGIVALNWLGWHIETSIMVLLITLVVLIGLLLFFSRFFGGILGIPQWWRRRRNEKK LRRGSLAVGEGIAAARGGDVHLARKLLKDAERLLPGAAGTQQLTADTAAAAGETDVAEKAYGLMLENPRTQASGRRGLLD LALTRGDLDKAYAIVREAVATGVDAPWATATLFRLQLLRRQWADAESTLAKAGNGVLKPGDDAKVVKAALLTVQARDAEL PGRGGDALRLSQQAVELDPTSREATLIAARQLAATGRQRKAAQLLIALWAKHPHPSLAQAYLALWTGEDSLKIVRHAQEL TGANPEHPMSRRVFAEAALDAQLWGEARQSLEPLLRDVPSATICRLMARLEEGEKGDVTAANQWLRRALEAGPEVEEDGV TALAVLESACSPFGTIAAAERKASGGRDLALAS
Specific function: Unknown
COG id: COG3898
COG function: function code S; Uncharacterized membrane-bound protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46549; Mature: 46549
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRILLFVLLAGLLVIGAVWIAEHPGIVALNWLGWHIETSIMVLLITLVVLIGLLLFFSR CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH FFGGILGIPQWWRRRRNEKKLRRGSLAVGEGIAAARGGDVHLARKLLKDAERLLPGAAGT HHHHHCCCHHHHHHHCCHHHHHHCCCHHCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCC QQLTADTAAAAGETDVAEKAYGLMLENPRTQASGRRGLLDLALTRGDLDKAYAIVREAVA HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHH TGVDAPWATATLFRLQLLRRQWADAESTLAKAGNGVLKPGDDAKVVKAALLTVQARDAEL HCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCC PGRGGDALRLSQQAVELDPTSREATLIAARQLAATGRQRKAAQLLIALWAKHPHPSLAQA CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHH YLALWTGEDSLKIVRHAQELTGANPEHPMSRRVFAEAALDAQLWGEARQSLEPLLRDVPS HHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ATICRLMARLEEGEKGDVTAANQWLRRALEAGPEVEEDGVTALAVLESACSPFGTIAAAE HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHH RKASGGRDLALAS HHCCCCCCCCCCC >Mature Secondary Structure MLRILLFVLLAGLLVIGAVWIAEHPGIVALNWLGWHIETSIMVLLITLVVLIGLLLFFSR CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH FFGGILGIPQWWRRRRNEKKLRRGSLAVGEGIAAARGGDVHLARKLLKDAERLLPGAAGT HHHHHCCCHHHHHHHCCHHHHHHCCCHHCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCC QQLTADTAAAAGETDVAEKAYGLMLENPRTQASGRRGLLDLALTRGDLDKAYAIVREAVA HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHH TGVDAPWATATLFRLQLLRRQWADAESTLAKAGNGVLKPGDDAKVVKAALLTVQARDAEL HCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCC PGRGGDALRLSQQAVELDPTSREATLIAARQLAATGRQRKAAQLLIALWAKHPHPSLAQA CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHH YLALWTGEDSLKIVRHAQELTGANPEHPMSRRVFAEAALDAQLWGEARQSLEPLLRDVPS HHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ATICRLMARLEEGEKGDVTAANQWLRRALEAGPEVEEDGVTALAVLESACSPFGTIAAAE HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHH RKASGGRDLALAS HHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA