| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594845
Identifier: 83594845
GI number: 83594845
Start: 4048865
End: 4049170
Strand: Direct
Name: 83594845
Synonym: Rru_A3516
Alternate gene names: NA
Gene position: 4048865-4049170 (Clockwise)
Preceding gene: 83594844
Following gene: 83594850
Centisome position: 93.02
GC content: 61.11
Gene sequence:
>306_bases ATGACCATGGACGGACCGGCCCACATGCCCCGGCGCTATGTGACCTTCCAGGGCGTCAATGTGGAAGGCCTCAGCCAGCA ATTGATCGCGCGCATCTTGTTCCATGTCGCCGATCCGGCCAAAAGCAACGCCTTTTGGGAGCACTTCAAGGCCAAGCTCG CCGATGCCGACAAGACCCTGGCGCGCACCGCCGACAGCCTATGCCTGCTGTGCGGCGCCATCGGCTATATCGACGAGTTG TTCGAAGACAATGACGACGAGGAGGGGCTGACCATCCTGCGTCGCCTGGAAGACGAACTCTGCTGA
Upstream 100 bases:
>100_bases CAAAACGGCGGCGGTTGGTGAATGGCCGCTGACGGCGGCGGGGAGGATGGTCATTCTCATCCTCGCACCCAGTTTCTCTT CAGCGATTTCGGGGGATATC
Downstream 100 bases:
>100_bases CCCGCACCTTGTCGGCTTAGGGTTTTTCCATCGCCACCCGGCCGATCGGCGTCTGGCGCGGTCCGCGACCGATGAAGACG ACCAGCACCACGGCAATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MTMDGPAHMPRRYVTFQGVNVEGLSQQLIARILFHVADPAKSNAFWEHFKAKLADADKTLARTADSLCLLCGAIGYIDEL FEDNDDEEGLTILRRLEDELC
Sequences:
>Translated_101_residues MTMDGPAHMPRRYVTFQGVNVEGLSQQLIARILFHVADPAKSNAFWEHFKAKLADADKTLARTADSLCLLCGAIGYIDEL FEDNDDEEGLTILRRLEDELC >Mature_100_residues TMDGPAHMPRRYVTFQGVNVEGLSQQLIARILFHVADPAKSNAFWEHFKAKLADADKTLARTADSLCLLCGAIGYIDELF EDNDDEEGLTILRRLEDELC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11357; Mature: 11226
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMDGPAHMPRRYVTFQGVNVEGLSQQLIARILFHVADPAKSNAFWEHFKAKLADADKTL CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH ARTADSLCLLCGAIGYIDELFEDNDDEEGLTILRRLEDELC HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure TMDGPAHMPRRYVTFQGVNVEGLSQQLIARILFHVADPAKSNAFWEHFKAKLADADKTL CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH ARTADSLCLLCGAIGYIDELFEDNDDEEGLTILRRLEDELC HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA