| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83594831
Identifier: 83594831
GI number: 83594831
Start: 4030033
End: 4030488
Strand: Direct
Name: 83594831
Synonym: Rru_A3502
Alternate gene names: NA
Gene position: 4030033-4030488 (Clockwise)
Preceding gene: 83594827
Following gene: 83594832
Centisome position: 92.58
GC content: 64.91
Gene sequence:
>456_bases ATGCCAACACTGACCAAGGGACTCGCGGTTTTCGCCTTCCTGGCGATTCCGCTGTGCTTGATCATCGCCCTGTCGGAAGC CGACAGGCGAACGACGTTGTCTTTGGAGGCGGCGGAACGAACCAGTTTTCGTTTGGCCATGCGCAGCCATGTCATCGATC TCGACGAGATTCTGACGGCGATGGCCAAGGGCGATTACGACACGGCGGCGACCATCGCCTCGGACCGCATGGACAGCGCC GGTCAAAGGGCGCATCACCTGTCCGACATCATCCTTCCCGGTCCCGATACCCCGGCTTTCCGCGAGACCGAGCGCGCCCT CCATAACGCCGCCGACCGCTTCGGCGAAGCCGCGCGCGCCTCTCCGGGAAGCCCGGAAATGCGGGCGCGCTACCAGGAGC TGGTGGCGGTCTGCCAGGGCTGCCACACGTCCTTCCGCATCGACCCCGGCTTCTGA
Upstream 100 bases:
>100_bases CCCGGGCGGCGACGGACCACATAAGTGACACACATCAATGCGCGCCGACCGGCGCTGACGTTCCCTTTCCGGTCGGAGGA AACGAACGGGACAACCCGTC
Downstream 100 bases:
>100_bases CCCCCCGTCCGGCCAGCCCTGGGCCGGCCCTGGGCCAGCCGCCGCGCCGTTCTTTGGATGATTGCGCCAAAGGGCCGGCC GGGGCACTGTGCGCGGAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MPTLTKGLAVFAFLAIPLCLIIALSEADRRTTLSLEAAERTSFRLAMRSHVIDLDEILTAMAKGDYDTAATIASDRMDSA GQRAHHLSDIILPGPDTPAFRETERALHNAADRFGEAARASPGSPEMRARYQELVAVCQGCHTSFRIDPGF
Sequences:
>Translated_151_residues MPTLTKGLAVFAFLAIPLCLIIALSEADRRTTLSLEAAERTSFRLAMRSHVIDLDEILTAMAKGDYDTAATIASDRMDSA GQRAHHLSDIILPGPDTPAFRETERALHNAADRFGEAARASPGSPEMRARYQELVAVCQGCHTSFRIDPGF >Mature_150_residues PTLTKGLAVFAFLAIPLCLIIALSEADRRTTLSLEAAERTSFRLAMRSHVIDLDEILTAMAKGDYDTAATIASDRMDSAG QRAHHLSDIILPGPDTPAFRETERALHNAADRFGEAARASPGSPEMRARYQELVAVCQGCHTSFRIDPGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16430; Mature: 16299
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: PS00599 AA_TRANSFER_CLASS_2 ; PS51009 CYTCII
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLTKGLAVFAFLAIPLCLIIALSEADRRTTLSLEAAERTSFRLAMRSHVIDLDEILTA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHCCCHHHHHHH MAKGDYDTAATIASDRMDSAGQRAHHLSDIILPGPDTPAFRETERALHNAADRFGEAARA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCHHHHHHHHHHHHHHHHHHHHCC SPGSPEMRARYQELVAVCQGCHTSFRIDPGF CCCCHHHHHHHHHHHHHHHCCCCCCEECCCC >Mature Secondary Structure PTLTKGLAVFAFLAIPLCLIIALSEADRRTTLSLEAAERTSFRLAMRSHVIDLDEILTA CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHCCCHHHHHHH MAKGDYDTAATIASDRMDSAGQRAHHLSDIILPGPDTPAFRETERALHNAADRFGEAARA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCHHHHHHHHHHHHHHHHHHHHCC SPGSPEMRARYQELVAVCQGCHTSFRIDPGF CCCCHHHHHHHHHHHHHHHCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA