| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594826
Identifier: 83594826
GI number: 83594826
Start: 4026475
End: 4027008
Strand: Direct
Name: 83594826
Synonym: Rru_A3497
Alternate gene names: NA
Gene position: 4026475-4027008 (Clockwise)
Preceding gene: 83594824
Following gene: 83594827
Centisome position: 92.5
GC content: 69.1
Gene sequence:
>534_bases ATGCCGCCGATGCCCGCCGCCTGTCCCTTCCGGGGGCTGCGTCTGCTGGCCCTGGCCCTGCTGCTGGTCAGTGGCGGAGC GTTGATGGCCGCGCTCTATGCCGAGTTCGCCCTTGGCTTGGAGCCTTGCGTTCTGTGTCTTTACGAACGCGGTCCCTGGG TTTTGGCCGCCCTGCTCTGCGCCATCGCCTTTCAGCCCGGGCTTGACGCGTCGTGGCGTCGCCGCCTGCTCGGCCTCTGC GCCCTGGCCTTTTTTGGCAATGCGCTGCTCGCGGGCTTTCATATCGGCGTCGAACAGCATTGGTGGGCGGGCACGGATGC CTGCGGGCCGACGGCGGCCGGACCGGGCGTCGGGTCCTTGGGCGATCTGCGGGCGGCGATGAGCGCCCCGGCCCCGGCCA CGGCGCGCTGCGACACGCCGTCTTGGACCTTCCATGGGCTGACCCTGGCCGGACTCAACCTGATTTTATCGCTGATCCTG GGCGGGGTGACGGGTTGGCGGGTGCTGCGCCGCGACGATAGCCACCCCATATAA
Upstream 100 bases:
>100_bases CTTGCCGAGAGCGGGACCGGTGGCCGGCGACGGCGATGGTTGCCAGGGCGCAAGCGCCTTGCTAGATCAAGGCCGGTCCA AGCTCCCAAGGAGAACCCCC
Downstream 100 bases:
>100_bases ACGCCGGTCCGCGTTTTCTAGGAGCCTTCCCGCCATGACCTCGCCGTCCTCGCGCACCCCCCGGGGGTCCACTCCGCCCT TCGAACCCTCGGCCGACGAG
Product: disulfide bond formation protein DsbB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MPPMPAACPFRGLRLLALALLLVSGGALMAALYAEFALGLEPCVLCLYERGPWVLAALLCAIAFQPGLDASWRRRLLGLC ALAFFGNALLAGFHIGVEQHWWAGTDACGPTAAGPGVGSLGDLRAAMSAPAPATARCDTPSWTFHGLTLAGLNLILSLIL GGVTGWRVLRRDDSHPI
Sequences:
>Translated_177_residues MPPMPAACPFRGLRLLALALLLVSGGALMAALYAEFALGLEPCVLCLYERGPWVLAALLCAIAFQPGLDASWRRRLLGLC ALAFFGNALLAGFHIGVEQHWWAGTDACGPTAAGPGVGSLGDLRAAMSAPAPATARCDTPSWTFHGLTLAGLNLILSLIL GGVTGWRVLRRDDSHPI >Mature_176_residues PPMPAACPFRGLRLLALALLLVSGGALMAALYAEFALGLEPCVLCLYERGPWVLAALLCAIAFQPGLDASWRRRLLGLCA LAFFGNALLAGFHIGVEQHWWAGTDACGPTAAGPGVGSLGDLRAAMSAPAPATARCDTPSWTFHGLTLAGLNLILSLILG GVTGWRVLRRDDSHPI
Specific function: Unknown
COG id: COG1495
COG function: function code O; Disulfide bond formation protein DsbB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18530; Mature: 18399
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPMPAACPFRGLRLLALALLLVSGGALMAALYAEFALGLEPCVLCLYERGPWVLAALLC CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHH AIAFQPGLDASWRRRLLGLCALAFFGNALLAGFHIGVEQHWWAGTDACGPTAAGPGVGSL HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCH GDLRAAMSAPAPATARCDTPSWTFHGLTLAGLNLILSLILGGVTGWRVLRRDDSHPI HHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC >Mature Secondary Structure PPMPAACPFRGLRLLALALLLVSGGALMAALYAEFALGLEPCVLCLYERGPWVLAALLC CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHH AIAFQPGLDASWRRRLLGLCALAFFGNALLAGFHIGVEQHWWAGTDACGPTAAGPGVGSL HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCH GDLRAAMSAPAPATARCDTPSWTFHGLTLAGLNLILSLILGGVTGWRVLRRDDSHPI HHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA