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The map label for this gene is ybaB [C]

Identifier: 83594801

GI number: 83594801

Start: 3996240

End: 3996563

Strand: Reverse

Name: ybaB [C]

Synonym: Rru_A3472

Alternate gene names: 83594801

Gene position: 3996563-3996240 (Counterclockwise)

Preceding gene: 83594802

Following gene: 83594800

Centisome position: 91.82

GC content: 61.11

Gene sequence:

>324_bases
ATGAAAAACATCGGGCAAATGCTCAAGCAGGCCCAGCAGCTGCAAACCCGCATGGCCGAAGTTCAAGAAGAGCTGAAGGC
GATGGACGTCAGCGGCCAGTCGGCGGCCGGCATGTGCGTGGTAACCCTGGACGGCAAGGGCGGCGTGCGCTCGATCAAGA
TCGATCCCTCGCTGGTCGATCCCAAGGAAACCGAGGTCATGGAAGACCTGATCGTCGCCGCCTTCAACGACGCCAAGGCC
AAGGTCGACGAGATGGTGAAGGAAAAGATGTCGGAACTGACCGGCGGGCTGAAGCTGCCGCCGGGCATGAGCCTGCCCTT
CTGA

Upstream 100 bases:

>100_bases
TCGGCGATCCTGGCGAGGCTTATGGCGCGCCCGGCTTCGACACCCCGGCGGGCGCCGATCCAGACGATCTGTTCGACCCA
TTCATCGGAGACGACGAGAC

Downstream 100 bases:

>100_bases
TCCCACGTCTTTTGTCCGGAGGGTCCCGGTGTCCGCGGGAGAGATCGACCGTCTGATCGGCCTGCTGGCCCGACTGCCCG
GATTGGGTCCCCGTTCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MKNIGQMLKQAQQLQTRMAEVQEELKAMDVSGQSAAGMCVVTLDGKGGVRSIKIDPSLVDPKETEVMEDLIVAAFNDAKA
KVDEMVKEKMSELTGGLKLPPGMSLPF

Sequences:

>Translated_107_residues
MKNIGQMLKQAQQLQTRMAEVQEELKAMDVSGQSAAGMCVVTLDGKGGVRSIKIDPSLVDPKETEVMEDLIVAAFNDAKA
KVDEMVKEKMSELTGGLKLPPGMSLPF
>Mature_107_residues
MKNIGQMLKQAQQLQTRMAEVQEELKAMDVSGQSAAGMCVVTLDGKGGVRSIKIDPSLVDPKETEVMEDLIVAAFNDAKA
KVDEMVKEKMSELTGGLKLPPGMSLPF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=104, Percent_Identity=45.1923076923077, Blast_Score=107, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3472_RHORT (Q2RNM9)

Other databases:

- EMBL:   CP000230
- RefSeq:   YP_428553.1
- ProteinModelPortal:   Q2RNM9
- SMR:   Q2RNM9
- STRING:   Q2RNM9
- GeneID:   3836924
- GenomeReviews:   CP000230_GR
- KEGG:   rru:Rru_A3472
- NMPDR:   fig|1085.1.peg.2026
- eggNOG:   COG0718
- HOGENOM:   HBG734215
- OMA:   MLQDLIL
- PhylomeDB:   Q2RNM9
- BioCyc:   RRUB269796:RRU_A3472-MONOMER
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 11553; Mature: 11553

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
8.4 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
8.4 %Met     (Mature Protein)
9.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIGQMLKQAQQLQTRMAEVQEELKAMDVSGQSAAGMCVVTLDGKGGVRSIKIDPSLVD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEECCCCCC
PKETEVMEDLIVAAFNDAKAKVDEMVKEKMSELTGGLKLPPGMSLPF
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKNIGQMLKQAQQLQTRMAEVQEELKAMDVSGQSAAGMCVVTLDGKGGVRSIKIDPSLVD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEECCCCCC
PKETEVMEDLIVAAFNDAKAKVDEMVKEKMSELTGGLKLPPGMSLPF
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA