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The map label for this gene is yqjI [H]

Identifier: 83594770

GI number: 83594770

Start: 3962713

End: 3963327

Strand: Reverse

Name: yqjI [H]

Synonym: Rru_A3441

Alternate gene names: 83594770

Gene position: 3963327-3962713 (Counterclockwise)

Preceding gene: 83594771

Following gene: 83594769

Centisome position: 91.05

GC content: 65.85

Gene sequence:

>615_bases
ATGAGACATCTTTTCACCCATCCCCTGGGCCAACGCTTTGGCCGGGGGCCGATCGGGCGGGCTTTTGAGGGGTTGGCCCG
GCATGGCCATGGCTTTGGCCATGGCGGCGAGGGCGGGCATCGCGGCGGTGGGCGGGGCGGACGGGGCGGCTCGATGGGGC
GCTTCTTTGATCACGGCGATCTGCGCTTCGTCATTCTCGGCCTGATTGCCGACAAGCCCAGCCATGGCTATGAACTGATC
AAAGCCATCGAAGACCGGGTCGGCGGCGCCTATAGCCCAAGCCCCGGGGTGATCTACCCCACCCTGACCCTGCTTGACGA
ATTGGGTTATGTGACGGTCAGCACCGAAACCGGCCCGCGCAAGCTTTATGCGATCACCGATGAGGGCTTGGCCTTCCTCG
AGGCCAATCGTGATACCGTCACCGCGGTTTTCGCCCGCATGGACGAGGCCGGCGAACGCCGGGGCGGCGGGACGGCGCCG
CAGATCGTCCGCGCCATAGAAAACCTCAAGCTGACCGTTCGCCTGCGCTTGGATCGCGGGCCGCTGTCCGAAGCCGAGAC
TGAGACCATCGCCAAGGCCCTGGACGACGCGGCGGCGACCATCGAACGGAGCTGA

Upstream 100 bases:

>100_bases
CCCCTTCCCCGCGAAAAAATCTCCCCGTCGGCCTTGCATCAGACTGTGTTTCGATATATCTATAATTTCGTTATATCGAA
ACACTATCGAGGACATCACT

Downstream 100 bases:

>100_bases
AGGGACACGGCGCGATGGAAACACCCGACGAGATCACCGCGCTCCGGACCCTGCTGGCCGAAGCGCTTGATCGCCTTGCC
GGCCCGCCGCCGCCCGCCGC

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MRHLFTHPLGQRFGRGPIGRAFEGLARHGHGFGHGGEGGHRGGGRGGRGGSMGRFFDHGDLRFVILGLIADKPSHGYELI
KAIEDRVGGAYSPSPGVIYPTLTLLDELGYVTVSTETGPRKLYAITDEGLAFLEANRDTVTAVFARMDEAGERRGGGTAP
QIVRAIENLKLTVRLRLDRGPLSEAETETIAKALDDAAATIERS

Sequences:

>Translated_204_residues
MRHLFTHPLGQRFGRGPIGRAFEGLARHGHGFGHGGEGGHRGGGRGGRGGSMGRFFDHGDLRFVILGLIADKPSHGYELI
KAIEDRVGGAYSPSPGVIYPTLTLLDELGYVTVSTETGPRKLYAITDEGLAFLEANRDTVTAVFARMDEAGERRGGGTAP
QIVRAIENLKLTVRLRLDRGPLSEAETETIAKALDDAAATIERS
>Mature_204_residues
MRHLFTHPLGQRFGRGPIGRAFEGLARHGHGFGHGGEGGHRGGGRGGRGGSMGRFFDHGDLRFVILGLIADKPSHGYELI
KAIEDRVGGAYSPSPGVIYPTLTLLDELGYVTVSTETGPRKLYAITDEGLAFLEANRDTVTAVFARMDEAGERRGGGTAP
QIVRAIENLKLTVRLRLDRGPLSEAETETIAKALDDAAATIERS

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789452, Length=148, Percent_Identity=42.5675675675676, Blast_Score=121, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 21847; Mature: 21847

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHLFTHPLGQRFGRGPIGRAFEGLARHGHGFGHGGEGGHRGGGRGGRGGSMGRFFDHGD
CCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LRFVILGLIADKPSHGYELIKAIEDRVGGAYSPSPGVIYPTLTLLDELGYVTVSTETGPR
CEEEEEEHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCEEEEECCCCCE
KLYAITDEGLAFLEANRDTVTAVFARMDEAGERRGGGTAPQIVRAIENLKLTVRLRLDRG
EEEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEEEECCC
PLSEAETETIAKALDDAAATIERS
CCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRHLFTHPLGQRFGRGPIGRAFEGLARHGHGFGHGGEGGHRGGGRGGRGGSMGRFFDHGD
CCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LRFVILGLIADKPSHGYELIKAIEDRVGGAYSPSPGVIYPTLTLLDELGYVTVSTETGPR
CEEEEEEHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCEEEEECCCCCE
KLYAITDEGLAFLEANRDTVTAVFARMDEAGERRGGGTAPQIVRAIENLKLTVRLRLDRG
EEEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEEEECCC
PLSEAETETIAKALDDAAATIERS
CCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]