| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594761
Identifier: 83594761
GI number: 83594761
Start: 3950093
End: 3951616
Strand: Reverse
Name: 83594761
Synonym: Rru_A3432
Alternate gene names: NA
Gene position: 3951616-3950093 (Counterclockwise)
Preceding gene: 83594762
Following gene: 83594758
Centisome position: 90.78
GC content: 71.65
Gene sequence:
>1524_bases ATGCACGAGATCGCGCCGCTGTCGCCGGCCGCCGCCGCCCTGGCCGATTTCCAGCCCGATCGCGGACCGGCGGCCCTCAA TGGCGCGGCGGTCTTCTGCGGCTTCGCCCCGCGCCCCCTGGACGACGGGTTCACCTGGGCCGATTTCGGCTGCGGCTTGG GCATCACCGCCAGCATCCTAGCCGCCGCCAACCCGCAGGGCCGCTTCTTCGCCATCGATGCCGATGGCCAAGCCCTGGCC GCCGGGCGCGCGCTGGCCAAGGCCGCCTTCCTCGATAATCTGACGTTTCTGCAAGCCGATTACACCAAGCCCCACGACCT CGACCTGCCGCCGCTGGATTTCGCGGTTCTGGGCAATGTTCTGTGCTGGCTTGATGGCCAGGAGCGTCAGGCCTTGTTGT CGCGTCTGGGCACCTTGCTCAAGCCCGGGGGCATCGTGCTGGCCACCTATGACGCCCTGCCCGGCGCCGCCGCCCTGGTG CCCTTGCGCGACCTGCTTTTCAGCGTCACCGCCGGGCAAGCGGCCAATCCCGTGGCGCGGGCGCGGGCGGCGATCGACTG GCTGGGCGCGATGCGCGCCGCTGGCATCGATTTCTTCCGCGACAATCCCGCCCTTGGCCCCCGCCTCGACGCTCTGATCG AACGCGGCCCCCAGGCCCTGGCCGGGCGGTTCTTCGGCGGCACCCTGCGGCCCTTGCACTTCGCCCAGGTCAACGCCGAG ATGGCCGCCCAGGGGCTGACCTTCGCCGGGCGGGCCGAAGCCTTCCTCAATCTGATCGATCTGGCGGTTCCGGCCGCCTT GCGACCCAGGCTGCGCGCCGCCACCAGCCGGGCCGAGGTCGAGGCCACCCGCGATTTCATCCGCAACGAGGATCACCGCC GCGACCTTTACATCAAGGGTGCGGCGCCGAGCGACGGCGCGGCCCTGACAGCCTTCGACGACGGCCGCATCCTTGGTCCG GCCGCCGCTCCGGGACAAGCTAACCCCGAAGTGAGCTTCGGCGCGGTTTCCCTGTCGTTTCGCGGGGCGCTGTTTGAAAG CTTGCTTGCCGCCCTGGATCTTGGCCCGCGACCGGTTGGCGAGCTCTGCGCCAGCGCCGCCCTGGAAGGCGTGCCGCCCG GGCTGATCCGCGACGGCCTGCGCCTGCTGACCGCCGGCGGGCTGGCCCGCCCCTATGCCCGGGCGGCCGATGTGGCGCCG GCCGCGCCGCCGGTCTGGCCCCTGCGCCTGCCCCATCCGCTCAACCGCGCCCTGGCCCTGACCCTGGGCCTAGGCGGACC GACCGTCGCCCTGGCCAGCAAGGTGCTGGGCGATGGCGTGGTGATGGATAACCGCGACGCCCTGCTGCTGGTGGCGCTGT GCGATGCCGGCCCGGAAGGGGCGGTGGAGAGGGCGCTGGCGATCCTCGCCGATCAGGCCATCCCTTGCGGCCCGGCCACC ACCCAGGCCCTGACCGACCGCCTTTCCCCCCTGATCACCGATATCCTGCCCTGGCTGCGAGTCTTGGGCGTGGTCGAGGG ATGA
Upstream 100 bases:
>100_bases TGACGGGCTCCCGTCCACGGGATCGAATGACGTCGGAGAAGCCTTCCCTTCTTGGGGAGCCTTGATCGCGACTGCGGAAA GACGAAGCGGAGAGGCTGTC
Downstream 100 bases:
>100_bases CCCCTCAGCGCGGCGGAGTGCCGTTTTCGGCGAGCACGGTGCCGGCCAGATAGAGCGAGCCGCAAATCAGGATGCGGGCG GCGGGGGGCGGTGTCGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 507
Protein sequence:
>507_residues MHEIAPLSPAAAALADFQPDRGPAALNGAAVFCGFAPRPLDDGFTWADFGCGLGITASILAAANPQGRFFAIDADGQALA AGRALAKAAFLDNLTFLQADYTKPHDLDLPPLDFAVLGNVLCWLDGQERQALLSRLGTLLKPGGIVLATYDALPGAAALV PLRDLLFSVTAGQAANPVARARAAIDWLGAMRAAGIDFFRDNPALGPRLDALIERGPQALAGRFFGGTLRPLHFAQVNAE MAAQGLTFAGRAEAFLNLIDLAVPAALRPRLRAATSRAEVEATRDFIRNEDHRRDLYIKGAAPSDGAALTAFDDGRILGP AAAPGQANPEVSFGAVSLSFRGALFESLLAALDLGPRPVGELCASAALEGVPPGLIRDGLRLLTAGGLARPYARAADVAP AAPPVWPLRLPHPLNRALALTLGLGGPTVALASKVLGDGVVMDNRDALLLVALCDAGPEGAVERALAILADQAIPCGPAT TQALTDRLSPLITDILPWLRVLGVVEG
Sequences:
>Translated_507_residues MHEIAPLSPAAAALADFQPDRGPAALNGAAVFCGFAPRPLDDGFTWADFGCGLGITASILAAANPQGRFFAIDADGQALA AGRALAKAAFLDNLTFLQADYTKPHDLDLPPLDFAVLGNVLCWLDGQERQALLSRLGTLLKPGGIVLATYDALPGAAALV PLRDLLFSVTAGQAANPVARARAAIDWLGAMRAAGIDFFRDNPALGPRLDALIERGPQALAGRFFGGTLRPLHFAQVNAE MAAQGLTFAGRAEAFLNLIDLAVPAALRPRLRAATSRAEVEATRDFIRNEDHRRDLYIKGAAPSDGAALTAFDDGRILGP AAAPGQANPEVSFGAVSLSFRGALFESLLAALDLGPRPVGELCASAALEGVPPGLIRDGLRLLTAGGLARPYARAADVAP AAPPVWPLRLPHPLNRALALTLGLGGPTVALASKVLGDGVVMDNRDALLLVALCDAGPEGAVERALAILADQAIPCGPAT TQALTDRLSPLITDILPWLRVLGVVEG >Mature_507_residues MHEIAPLSPAAAALADFQPDRGPAALNGAAVFCGFAPRPLDDGFTWADFGCGLGITASILAAANPQGRFFAIDADGQALA AGRALAKAAFLDNLTFLQADYTKPHDLDLPPLDFAVLGNVLCWLDGQERQALLSRLGTLLKPGGIVLATYDALPGAAALV PLRDLLFSVTAGQAANPVARARAAIDWLGAMRAAGIDFFRDNPALGPRLDALIERGPQALAGRFFGGTLRPLHFAQVNAE MAAQGLTFAGRAEAFLNLIDLAVPAALRPRLRAATSRAEVEATRDFIRNEDHRRDLYIKGAAPSDGAALTAFDDGRILGP AAAPGQANPEVSFGAVSLSFRGALFESLLAALDLGPRPVGELCASAALEGVPPGLIRDGLRLLTAGGLARPYARAADVAP AAPPVWPLRLPHPLNRALALTLGLGGPTVALASKVLGDGVVMDNRDALLLVALCDAGPEGAVERALAILADQAIPCGPAT TQALTDRLSPLITDILPWLRVLGVVEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To R.prowazekii RP789, RP027 and RP028 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013217 - InterPro: IPR018773 [H]
Pfam domain/function: PF08242 Methyltransf_12; PF10119 MethyTransf_Reg [H]
EC number: NA
Molecular weight: Translated: 52504; Mature: 52504
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHEIAPLSPAAAALADFQPDRGPAALNGAAVFCGFAPRPLDDGFTWADFGCGLGITASIL CCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCEEHHHCCCCCHHHHHH AAANPQGRFFAIDADGQALAAGRALAKAAFLDNLTFLQADYTKPHDLDLPPLDFAVLGNV HHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHCCC LCWLDGQERQALLSRLGTLLKPGGIVLATYDALPGAAALVPLRDLLFSVTAGQAANPVAR CEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHH ARAAIDWLGAMRAAGIDFFRDNPALGPRLDALIERGPQALAGRFFGGTLRPLHFAQVNAE HHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCEEHHHHCHH MAAQGLTFAGRAEAFLNLIDLAVPAALRPRLRAATSRAEVEATRDFIRNEDHRRDLYIKG HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC AAPSDGAALTAFDDGRILGPAAAPGQANPEVSFGAVSLSFRGALFESLLAALDLGPRPVG CCCCCCCEEEEECCCCEECCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCHH ELCASAALEGVPPGLIRDGLRLLTAGGLARPYARAADVAPAAPPVWPLRLPHPLNRALAL HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEE TLGLGGPTVALASKVLGDGVVMDNRDALLLVALCDAGPEGAVERALAILADQAIPCGPAT EECCCCHHHHHHHHHHCCCEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCH TQALTDRLSPLITDILPWLRVLGVVEG HHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHEIAPLSPAAAALADFQPDRGPAALNGAAVFCGFAPRPLDDGFTWADFGCGLGITASIL CCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCEEHHHCCCCCHHHHHH AAANPQGRFFAIDADGQALAAGRALAKAAFLDNLTFLQADYTKPHDLDLPPLDFAVLGNV HHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHCCC LCWLDGQERQALLSRLGTLLKPGGIVLATYDALPGAAALVPLRDLLFSVTAGQAANPVAR CEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHH ARAAIDWLGAMRAAGIDFFRDNPALGPRLDALIERGPQALAGRFFGGTLRPLHFAQVNAE HHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCEEHHHHCHH MAAQGLTFAGRAEAFLNLIDLAVPAALRPRLRAATSRAEVEATRDFIRNEDHRRDLYIKG HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC AAPSDGAALTAFDDGRILGPAAAPGQANPEVSFGAVSLSFRGALFESLLAALDLGPRPVG CCCCCCCEEEEECCCCEECCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCHH ELCASAALEGVPPGLIRDGLRLLTAGGLARPYARAADVAPAAPPVWPLRLPHPLNRALAL HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEE TLGLGGPTVALASKVLGDGVVMDNRDALLLVALCDAGPEGAVERALAILADQAIPCGPAT EECCCCHHHHHHHHHHCCCEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCH TQALTDRLSPLITDILPWLRVLGVVEG HHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]