Click here to switch to the map view.

The map label for this gene is chvI [H]

Identifier: 83594751

GI number: 83594751

Start: 3939274

End: 3939999

Strand: Direct

Name: chvI [H]

Synonym: Rru_A3422

Alternate gene names: 83594751

Gene position: 3939274-3939999 (Clockwise)

Preceding gene: 83594750

Following gene: 83594752

Centisome position: 90.5

GC content: 60.88

Gene sequence:

>726_bases
GTGACCCACAGCATCGCCTTGGTGGATGACGACCGCAATATCCTGACCTCCGTGTCGATGACGCTCGAAGCCGAAGGATT
TCGGGTGGTGACCTATACGGACGGGGCGGAGGCTTTGCGCGGGCTGAGTATCGAACCGGTCGATCTGGCCGTCCTCGATA
TCAAGATGCCGCGCATGGATGGCATGGAACTGCTTCAGAAGCTGCGCGAGCGCACCGCCATGCCGGTGATCTTCCTGACT
TCGAAGGATGACGAGGTCGACGAGCTTCTCGGTCTGCGCATGGGCGCCGACGACTATATCAAGAAGCCGTTTTCCCAACG
CTTGCTGATCGAGCGCATCCGCGCCATCTTGCGCCGGCTCGATCTGCAGAAAGCCTCGCCGGGGGGGCCAGAGCTGTCGG
CGGCGGCTTTGGTGCGCGGCGATCTGACCCTTGATCCCGATCGCCACCTCTGCACTTGGCTTGAACGGCCGGTCGATCTG
ACGGTGACCGAATTCCTGATCATCCAGGCCCTGGCGCAACGCCCCGGCCATGTCAAAAGCCGCGACCAGCTGATCGACGC
GGCCTATGGGGAAAACATCTATGTCGATGACCGCACCATCGACAGCCATATCAAACGACTGCGCAAGAAGTTCCGCGAGG
TCGATCGCGAGTTCTCGGAGATCGAAACCCTTTATGGCGTCGGCTATCGCTACCGCGACCCGATCACCGTCAAGGCCGGA
GCTTAA

Upstream 100 bases:

>100_bases
GCGTCAGGTGAAGAAAGGGACGGGACCGTTTCGCGGTCGCTGCTATGATGGCGACCGCGTTCCCGTCCCCGTCCGGTGGC
AGCTAGAGGAGAGGACACCC

Downstream 100 bases:

>100_bases
GCGTTAAGGGGTGGAAGCAGGGGAATGCGTGCCGATCCGGGCGACAGGCCCGATTCCACCCAGGAGCCCAAGCGGCGCCG
GCATCGGCGGCCGCGCGGAC

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MTHSIALVDDDRNILTSVSMTLEAEGFRVVTYTDGAEALRGLSIEPVDLAVLDIKMPRMDGMELLQKLRERTAMPVIFLT
SKDDEVDELLGLRMGADDYIKKPFSQRLLIERIRAILRRLDLQKASPGGPELSAAALVRGDLTLDPDRHLCTWLERPVDL
TVTEFLIIQALAQRPGHVKSRDQLIDAAYGENIYVDDRTIDSHIKRLRKKFREVDREFSEIETLYGVGYRYRDPITVKAG
A

Sequences:

>Translated_241_residues
MTHSIALVDDDRNILTSVSMTLEAEGFRVVTYTDGAEALRGLSIEPVDLAVLDIKMPRMDGMELLQKLRERTAMPVIFLT
SKDDEVDELLGLRMGADDYIKKPFSQRLLIERIRAILRRLDLQKASPGGPELSAAALVRGDLTLDPDRHLCTWLERPVDL
TVTEFLIIQALAQRPGHVKSRDQLIDAAYGENIYVDDRTIDSHIKRLRKKFREVDREFSEIETLYGVGYRYRDPITVKAG
A
>Mature_240_residues
THSIALVDDDRNILTSVSMTLEAEGFRVVTYTDGAEALRGLSIEPVDLAVLDIKMPRMDGMELLQKLRERTAMPVIFLTS
KDDEVDELLGLRMGADDYIKKPFSQRLLIERIRAILRRLDLQKASPGGPELSAAALVRGDLTLDPDRHLCTWLERPVDLT
VTEFLIIQALAQRPGHVKSRDQLIDAAYGENIYVDDRTIDSHIKRLRKKFREVDREFSEIETLYGVGYRYRDPITVKAGA

Specific function: Member of a two-component regulatory system ChvG(ExoS)/ChvI involved in regulating the production of succinoglycan [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790860, Length=230, Percent_Identity=37.3913043478261, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1788394, Length=230, Percent_Identity=37.3913043478261, Blast_Score=148, Evalue=3e-37,
Organism=Escherichia coli, GI1786599, Length=234, Percent_Identity=35.042735042735, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI2367329, Length=231, Percent_Identity=40.6926406926407, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1789809, Length=231, Percent_Identity=35.4978354978355, Blast_Score=138, Evalue=4e-34,
Organism=Escherichia coli, GI1790863, Length=234, Percent_Identity=35.4700854700855, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI1789402, Length=226, Percent_Identity=31.4159292035398, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1787229, Length=212, Percent_Identity=32.0754716981132, Blast_Score=110, Evalue=7e-26,
Organism=Escherichia coli, GI87082012, Length=229, Percent_Identity=34.061135371179, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1786911, Length=229, Percent_Identity=29.6943231441048, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1790552, Length=226, Percent_Identity=30.9734513274336, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=31.4655172413793, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1786784, Length=231, Percent_Identity=28.5714285714286, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1787375, Length=229, Percent_Identity=26.6375545851528, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790299, Length=101, Percent_Identity=36.6336633663366, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1788905, Length=117, Percent_Identity=37.6068376068376, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1788550, Length=102, Percent_Identity=36.2745098039216, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27353; Mature: 27222

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHSIALVDDDRNILTSVSMTLEAEGFRVVTYTDGAEALRGLSIEPVDLAVLDIKMPRMD
CCCEEEEEECCCHHHHHEEEEEECCCEEEEEECCCHHHHHCCCCCCCEEEEEEEECCCCC
GMELLQKLRERTAMPVIFLTSKDDEVDELLGLRMGADDYIKKPFSQRLLIERIRAILRRL
HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCHHHHHCHHHHHHHHHHHHHHHHHH
DLQKASPGGPELSAAALVRGDLTLDPDRHLCTWLERPVDLTVTEFLIIQALAQRPGHVKS
HHCCCCCCCCCCHHHHEEECCCEECCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC
RDQLIDAAYGENIYVDDRTIDSHIKRLRKKFREVDREFSEIETLYGVGYRYRDPITVKAG
HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEECC
A
C
>Mature Secondary Structure 
THSIALVDDDRNILTSVSMTLEAEGFRVVTYTDGAEALRGLSIEPVDLAVLDIKMPRMD
CCEEEEEECCCHHHHHEEEEEECCCEEEEEECCCHHHHHCCCCCCCEEEEEEEECCCCC
GMELLQKLRERTAMPVIFLTSKDDEVDELLGLRMGADDYIKKPFSQRLLIERIRAILRRL
HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCHHHHHCHHHHHHHHHHHHHHHHHH
DLQKASPGGPELSAAALVRGDLTLDPDRHLCTWLERPVDLTVTEFLIIQALAQRPGHVKS
HHCCCCCCCCCCHHHHEEECCCEECCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC
RDQLIDAAYGENIYVDDRTIDSHIKRLRKKFREVDREFSEIETLYGVGYRYRDPITVKAG
HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEECC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7559334 [H]