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The map label for this gene is rmuC [H]

Identifier: 83594677

GI number: 83594677

Start: 3862356

End: 3863534

Strand: Reverse

Name: rmuC [H]

Synonym: Rru_A3348

Alternate gene names: 83594677

Gene position: 3863534-3862356 (Counterclockwise)

Preceding gene: 83594683

Following gene: 83594673

Centisome position: 88.76

GC content: 66.07

Gene sequence:

>1179_bases
GTGACCGATCTTTCCACGATGTTCCAGGCGCTCGGCGCCCGTCTGGCCGCCCCCCAGGGTCTGGCCCTGCTCATCGCCCT
GATGGCGGCGGTGGCCGGGATCATCGCCCTGATCCTGGTGCTGCGCCGCCCGGGCGGTGGTGACGGCCGGCTATCCTCCC
TGGCCGCCGCCCAGGTCGAAATGGCCGGGCGTCTGGGTCAGATGGCCAAAAGTCAGGCCGCGGCCACCGCCTTGCTCGCC
GATCGCCTGCAATCCCAGGAGCGTCAGGTGAGCCGGGTTCTTGACGAGCGCATCACCGATCTGACGCGACGGGTGGGCGA
GGGACTGCAGCGTTCGACCGAAAAGACCGCCGAAAGCATGCAGGATCTGCGCGCCCGGCTGGCGACCATCGACGCCGCCC
AGAAGAACATCGCCGAGATGTCGGAAAAGATGACCAGCCTGCAGGACATCTTGTCCAACAAGCAGGCGCGCGGCGCTATG
GGCCAGACCCAGATGGAGGATCTGGTGCGCGATCTGTTGCCGCCCAGCGCCTATCGCTTCCAGGCCAAAATGGGCAACGG
CCGTATCGCCGATTGCCTGCTGACCCTGCCCAATCCGCCCGGGGCGATCGCCATCGACGCCAAATATCCCCTTGAATCCT
ATCGGGCCTTGCGGGCGGCGGGCAGCGATGCCGAGCGTCTGCAGGCGGGGCGGGCCTTCGCCGCCGATGTGCTGCGCCAT
GTCCGCGATATCGCCGAACGCTATATCATTGCCGACGAAACGGCGGAATCGGCCTTGATGTTCCTGCCGGCGGAAGCGGT
CTATGCCGAGCTTCACGCCAATTATCCCCAGGTGGTCGAACAGGCCTTTCGCCGCCGGGTGTGGATCGTCTCGCCAACCA
CGCTGATGGCGACGCTCAACACCGTGCGGGCCATCCTCAAGGACGCGCGGATGAACGATATGGCGGTTCTGATCCGCCGC
GAGGTTCGCGCCCTGATCGACGACGTGAACCGCCTGGATGACCGGGTGGGCAAGCTGGCCCGCCACTTCGGCCAGACCGG
CGAGGATCTGCGCCAGATCCAGATCTCGACCGAAAAGATCATGCGTCGCGGCGACCGCATCGAGGAGGTTCAGTTCGGCC
AGGACGAACCGGAAAGCCTGCCGCCGCCCACCGGCGAGATCAAGATCCCGCTGGCTTAA

Upstream 100 bases:

>100_bases
CCGGAATCCCGCAAGGGGGTCTTTGGTTCCCCGCCCGGGTTTGACGCGCCCCGCCGGAGCGTCGATAAGAGAGGGAATCA
ACCCCCAAGGATGCCCGCCC

Downstream 100 bases:

>100_bases
TAGGGTGCTCCAGCGCCGTCCTTCAGGAAGGGGCGCAGCAGGTCGGCGAATTCCTGGGCCTGACGGGTGATCGAAAACAG
AGCGACGCAGCGCGCCCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MTDLSTMFQALGARLAAPQGLALLIALMAAVAGIIALILVLRRPGGGDGRLSSLAAAQVEMAGRLGQMAKSQAAATALLA
DRLQSQERQVSRVLDERITDLTRRVGEGLQRSTEKTAESMQDLRARLATIDAAQKNIAEMSEKMTSLQDILSNKQARGAM
GQTQMEDLVRDLLPPSAYRFQAKMGNGRIADCLLTLPNPPGAIAIDAKYPLESYRALRAAGSDAERLQAGRAFAADVLRH
VRDIAERYIIADETAESALMFLPAEAVYAELHANYPQVVEQAFRRRVWIVSPTTLMATLNTVRAILKDARMNDMAVLIRR
EVRALIDDVNRLDDRVGKLARHFGQTGEDLRQIQISTEKIMRRGDRIEEVQFGQDEPESLPPPTGEIKIPLA

Sequences:

>Translated_392_residues
MTDLSTMFQALGARLAAPQGLALLIALMAAVAGIIALILVLRRPGGGDGRLSSLAAAQVEMAGRLGQMAKSQAAATALLA
DRLQSQERQVSRVLDERITDLTRRVGEGLQRSTEKTAESMQDLRARLATIDAAQKNIAEMSEKMTSLQDILSNKQARGAM
GQTQMEDLVRDLLPPSAYRFQAKMGNGRIADCLLTLPNPPGAIAIDAKYPLESYRALRAAGSDAERLQAGRAFAADVLRH
VRDIAERYIIADETAESALMFLPAEAVYAELHANYPQVVEQAFRRRVWIVSPTTLMATLNTVRAILKDARMNDMAVLIRR
EVRALIDDVNRLDDRVGKLARHFGQTGEDLRQIQISTEKIMRRGDRIEEVQFGQDEPESLPPPTGEIKIPLA
>Mature_391_residues
TDLSTMFQALGARLAAPQGLALLIALMAAVAGIIALILVLRRPGGGDGRLSSLAAAQVEMAGRLGQMAKSQAAATALLAD
RLQSQERQVSRVLDERITDLTRRVGEGLQRSTEKTAESMQDLRARLATIDAAQKNIAEMSEKMTSLQDILSNKQARGAMG
QTQMEDLVRDLLPPSAYRFQAKMGNGRIADCLLTLPNPPGAIAIDAKYPLESYRALRAAGSDAERLQAGRAFAADVLRHV
RDIAERYIIADETAESALMFLPAEAVYAELHANYPQVVEQAFRRRVWIVSPTTLMATLNTVRAILKDARMNDMAVLIRRE
VRALIDDVNRLDDRVGKLARHFGQTGEDLRQIQISTEKIMRRGDRIEEVQFGQDEPESLPPPTGEIKIPLA

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 43016; Mature: 42885

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLSTMFQALGARLAAPQGLALLIALMAAVAGIIALILVLRRPGGGDGRLSSLAAAQVE
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
MAGRLGQMAKSQAAATALLADRLQSQERQVSRVLDERITDLTRRVGEGLQRSTEKTAESM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QDLRARLATIDAAQKNIAEMSEKMTSLQDILSNKQARGAMGQTQMEDLVRDLLPPSAYRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHCCCCHHEE
QAKMGNGRIADCLLTLPNPPGAIAIDAKYPLESYRALRAAGSDAERLQAGRAFAADVLRH
HHHCCCCCEEHHEEECCCCCCCEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VRDIAERYIIADETAESALMFLPAEAVYAELHANYPQVVEQAFRRRVWIVSPTTLMATLN
HHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCEEEECCHHHHHHHH
TVRAILKDARMNDMAVLIRREVRALIDDVNRLDDRVGKLARHFGQTGEDLRQIQISTEKI
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
MRRGDRIEEVQFGQDEPESLPPPTGEIKIPLA
HHCCCCHHHHCCCCCCCCCCCCCCCCEEECCC
>Mature Secondary Structure 
TDLSTMFQALGARLAAPQGLALLIALMAAVAGIIALILVLRRPGGGDGRLSSLAAAQVE
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
MAGRLGQMAKSQAAATALLADRLQSQERQVSRVLDERITDLTRRVGEGLQRSTEKTAESM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QDLRARLATIDAAQKNIAEMSEKMTSLQDILSNKQARGAMGQTQMEDLVRDLLPPSAYRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHCCCCHHEE
QAKMGNGRIADCLLTLPNPPGAIAIDAKYPLESYRALRAAGSDAERLQAGRAFAADVLRH
HHHCCCCCEEHHEEECCCCCCCEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VRDIAERYIIADETAESALMFLPAEAVYAELHANYPQVVEQAFRRRVWIVSPTTLMATLN
HHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCEEEECCHHHHHHHH
TVRAILKDARMNDMAVLIRREVRALIDDVNRLDDRVGKLARHFGQTGEDLRQIQISTEKI
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
MRRGDRIEEVQFGQDEPESLPPPTGEIKIPLA
HHCCCCHHHHCCCCCCCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10684935 [H]