| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is fixI [H]
Identifier: 83594653
GI number: 83594653
Start: 3833135
End: 3835564
Strand: Reverse
Name: fixI [H]
Synonym: Rru_A3324
Alternate gene names: 83594653
Gene position: 3835564-3833135 (Counterclockwise)
Preceding gene: 83594654
Following gene: 83594652
Centisome position: 88.12
GC content: 70.53
Gene sequence:
>2430_bases ATGGACGGACTCTCCGAGACACGGCCGGCGGACTCGGCGGACGGGGGGACGGCGTGCAGGCACTGCGGCTTGCCCGTTCC GGCCAACGGTCCGGCGGGAGCGGAGTTTTGCTGCGTCGGCTGCCGGGGCGCCTATGGGCTGATCCGCGACAGCGGGCTTG ACCAGTATTACCAACGGCGCTGTCTTGATCCCGATACGCCGCCGCCCCGTCCCGAGGATCTGGGACCCATCGATTTTTCC GCCCATATCCTGCGTCAGCCGACGGCGGATGGCGGCGAGGAGGCGGTTCTCCATTTGATGGTCGAGGGCATCCACTGCGC CGCTTGCGTCTGGCTGATCGAAACCCTGTTGGGGCGCCAGCCCGGCGTATCCCAGGCCCGGCTCAATATGACCACCCGGC GTCTCACCTTGCGCTTTCGTCCGGCCAAAGGGGAAACCGCCGCCGATCTTGGCGCCAATACCCTGCTCGCCCCGGTGGCG CGCGTCGGCTATCGGCTGGTGCCCTATGATCCGGCGCTGCTTGATCAGGAAACCCGGCGCACCGAGAAAGCCCTGGTTCA GGCGATGGCGGTGGCCGGTTTCGCCAGCGCCAATGTCATGCTGCTGTCGGTTTCGGTCTGGGCCGGGGTCGATATGGGGC CGCGAACCCGCGACCTCATGCACTGGATTTCGGCACTGATCGCCGTTCCCGCCGTGATCTACGCCGTGCGCCCCTTCGCC CATTCCGCCTTCGCCGCGCTGCGCGCCGGCCGGGCGAGCATGGATATGCCCATTACCCTGGCCGTCACCCTGGCCACCGG CGTCAGCCTGTGGGAAACCGCCAATGGCGGCGCCCACGCCTATTTCGACGCGGCGGTAACGCTGCTGTTCTTCCTGTTGA TCGGCCGCTTTCTTGATCACCGGGCGCGTGGCCGCGCCCGCTCGACGGCCGAGCACCTGCTGGCCCTGGGCGCCACCGCC GTCACCGTGCTGCGCGACGACGGAACATTGGAGCATCGCCCGCCCCGGCAGGTGACCCCGGGGGCGACCGTGCTGGTGGC CACGGGCGAGCGCATCGGCGTTGATGGCACGGTCAGCCAGGGCTGCTCCGATGTCGATACCAGCCTGCTGACCGGCGAGA CCCTGCCCGAGCCGGTGCATCCGGGCAGCGCGGTCTTCGCCGGCACCCTCAATCTGACCGGACCGCTGCGCCTGAGCGCC GGCGCGGTTGGCGAGGGAACGCTGCTGGCCGAGATCGTGCGCATGATGGAGGTCGCCGAACAGGGGCGGGCGCGCTATGT GGCGATCGCCGACCGGGTGGCGCGCGCCTATGTTCCCGTCGTCCACGCCCTGGCTTTGGCCAGTTTCCTCGGCTGGCTCA CGCTGATGGGCGCGCCCTGGCAGCAAGCCCTGATGGTGGCGGCGGCCGTGTTGATCGTGACCTGTCCCTGCGCCCTGGCC CTGGCGGTGCCGGTGGTTCAGGTGGTGGCGACCGGCCGGCTGTTGCGCCAGGGCATTCTGGTGAAATCGCCCACCGCCCT GGAACGTCTGACCGGCGTCGACCACGTGGTTTTCGACAAGACCGGAACCCTGACCCTGGGGCGCCCCGATCTGCGGCCGG CCGATCCGGCGCGCGCCGATGCCTGGAGCGCCGAGGATCTCGCCGCCGCCGCCCAACTGGCCGCTGCCAGCCACCATCCC CTGGCCCGCGCCCTGGCTTTGGCCGCGCCCGAGGCCAAGCCCGCCGCCCTGGCCCGCGAATGGCCGGGGCAGGGCATGAG CCTGCCTTTGGCCGAGGGCGAGGCGCGACTGGGACGCGCCGTCTTCTGCGGCCTTGAGGACACCCCGGCCGAGGATGGCG GCGGGCCGGAGCTGTGGTTCACCCGTCCGGGCCATGCGCCGGTGCGCTTTGGCTTTATCGACCGGCCGCGCCCAGACGCG GCCGAGGTGGTGGCGGCGTTGCGCGCCCAGGGCATCGGCGTGGAATTGCTGTCGGGGGACCGGCCGGCGGTGGCCGCCGC CCTCGCCGCGCGGATCGGGCTGAACGACTGGCGGGCGGGTTGCTCCCCCGCCGACAAGGTGGCGCGGTTGGCCGAACTGG CGGCGGCGGGCAAGACCGTGCTGATGGTCGGCGACGGCCTGAACGACGCCCCGGCCCTGGCGGCCGCCCATGTCTCGCTG TCGCCGGCCTCGGCGGTGGATGTGACGCAGACCGCCGCCGATGTGGTTTTCCAGGGCGAGCGTCTGACCCCGGTGATCGA GGCGCTGGGCGTCGCCCGCCGCGCCGACCGGCTGGTCCGCCAGAATTTCGTCTTGTCCTTCGCCTATAATATCGTGACGG TGCCTTTGGCGATCTGTGGTCTGGTAACGCCGCTGATCGCCGCGGTGGCGATGAGCAGTTCCTCGGTGGTCGTTATCCTC AACGCCCTGCGCCTGTCGCGTCGCCGTTAA
Upstream 100 bases:
>100_bases CCCTTCGCCGGGCAATGGGAGGTGCGGGTGGTGGCGACGCGCGGTCAGGCGGTGTTCCGCATGCGCGATCGTTTCGTTCT TACCCCGTAAGGGACCGGTG
Downstream 100 bases:
>100_bases TCAATTGACTATGGACAAGGGAGGCGTCGATGGAAGCCTTGCTCTATCTGATTCCGATCGCCCTGTTCCTTGGCGCGACC GGACTTGCCGCTTTTGTCTG
Product: copper-translocating P-type ATPase
Products: ADP; Orthophosphate. [C]
Alternate protein names: E1-E2 type cation ATPase FixI [H]
Number of amino acids: Translated: 809; Mature: 809
Protein sequence:
>809_residues MDGLSETRPADSADGGTACRHCGLPVPANGPAGAEFCCVGCRGAYGLIRDSGLDQYYQRRCLDPDTPPPRPEDLGPIDFS AHILRQPTADGGEEAVLHLMVEGIHCAACVWLIETLLGRQPGVSQARLNMTTRRLTLRFRPAKGETAADLGANTLLAPVA RVGYRLVPYDPALLDQETRRTEKALVQAMAVAGFASANVMLLSVSVWAGVDMGPRTRDLMHWISALIAVPAVIYAVRPFA HSAFAALRAGRASMDMPITLAVTLATGVSLWETANGGAHAYFDAAVTLLFFLLIGRFLDHRARGRARSTAEHLLALGATA VTVLRDDGTLEHRPPRQVTPGATVLVATGERIGVDGTVSQGCSDVDTSLLTGETLPEPVHPGSAVFAGTLNLTGPLRLSA GAVGEGTLLAEIVRMMEVAEQGRARYVAIADRVARAYVPVVHALALASFLGWLTLMGAPWQQALMVAAAVLIVTCPCALA LAVPVVQVVATGRLLRQGILVKSPTALERLTGVDHVVFDKTGTLTLGRPDLRPADPARADAWSAEDLAAAAQLAAASHHP LARALALAAPEAKPAALAREWPGQGMSLPLAEGEARLGRAVFCGLEDTPAEDGGGPELWFTRPGHAPVRFGFIDRPRPDA AEVVAALRAQGIGVELLSGDRPAVAAALAARIGLNDWRAGCSPADKVARLAELAAAGKTVLMVGDGLNDAPALAAAHVSL SPASAVDVTQTAADVVFQGERLTPVIEALGVARRADRLVRQNFVLSFAYNIVTVPLAICGLVTPLIAAVAMSSSSVVVIL NALRLSRRR
Sequences:
>Translated_809_residues MDGLSETRPADSADGGTACRHCGLPVPANGPAGAEFCCVGCRGAYGLIRDSGLDQYYQRRCLDPDTPPPRPEDLGPIDFS AHILRQPTADGGEEAVLHLMVEGIHCAACVWLIETLLGRQPGVSQARLNMTTRRLTLRFRPAKGETAADLGANTLLAPVA RVGYRLVPYDPALLDQETRRTEKALVQAMAVAGFASANVMLLSVSVWAGVDMGPRTRDLMHWISALIAVPAVIYAVRPFA HSAFAALRAGRASMDMPITLAVTLATGVSLWETANGGAHAYFDAAVTLLFFLLIGRFLDHRARGRARSTAEHLLALGATA VTVLRDDGTLEHRPPRQVTPGATVLVATGERIGVDGTVSQGCSDVDTSLLTGETLPEPVHPGSAVFAGTLNLTGPLRLSA GAVGEGTLLAEIVRMMEVAEQGRARYVAIADRVARAYVPVVHALALASFLGWLTLMGAPWQQALMVAAAVLIVTCPCALA LAVPVVQVVATGRLLRQGILVKSPTALERLTGVDHVVFDKTGTLTLGRPDLRPADPARADAWSAEDLAAAAQLAAASHHP LARALALAAPEAKPAALAREWPGQGMSLPLAEGEARLGRAVFCGLEDTPAEDGGGPELWFTRPGHAPVRFGFIDRPRPDA AEVVAALRAQGIGVELLSGDRPAVAAALAARIGLNDWRAGCSPADKVARLAELAAAGKTVLMVGDGLNDAPALAAAHVSL SPASAVDVTQTAADVVFQGERLTPVIEALGVARRADRLVRQNFVLSFAYNIVTVPLAICGLVTPLIAAVAMSSSSVVVIL NALRLSRRR >Mature_809_residues MDGLSETRPADSADGGTACRHCGLPVPANGPAGAEFCCVGCRGAYGLIRDSGLDQYYQRRCLDPDTPPPRPEDLGPIDFS AHILRQPTADGGEEAVLHLMVEGIHCAACVWLIETLLGRQPGVSQARLNMTTRRLTLRFRPAKGETAADLGANTLLAPVA RVGYRLVPYDPALLDQETRRTEKALVQAMAVAGFASANVMLLSVSVWAGVDMGPRTRDLMHWISALIAVPAVIYAVRPFA HSAFAALRAGRASMDMPITLAVTLATGVSLWETANGGAHAYFDAAVTLLFFLLIGRFLDHRARGRARSTAEHLLALGATA VTVLRDDGTLEHRPPRQVTPGATVLVATGERIGVDGTVSQGCSDVDTSLLTGETLPEPVHPGSAVFAGTLNLTGPLRLSA GAVGEGTLLAEIVRMMEVAEQGRARYVAIADRVARAYVPVVHALALASFLGWLTLMGAPWQQALMVAAAVLIVTCPCALA LAVPVVQVVATGRLLRQGILVKSPTALERLTGVDHVVFDKTGTLTLGRPDLRPADPARADAWSAEDLAAAAQLAAASHHP LARALALAAPEAKPAALAREWPGQGMSLPLAEGEARLGRAVFCGLEDTPAEDGGGPELWFTRPGHAPVRFGFIDRPRPDA AEVVAALRAQGIGVELLSGDRPAVAAALAARIGLNDWRAGCSPADKVARLAELAAAGKTVLMVGDGLNDAPALAAAHVSL SPASAVDVTQTAADVVFQGERLTPVIEALGVARRADRLVRQNFVLSFAYNIVTVPLAICGLVTPLIAAVAMSSSSVVVIL NALRLSRRR
Specific function: FixI is a pump of a specific cation involved in symbiotic nitrogen fixation. The four proteins FixG, FixH, FixI, and FixS may participate in a membrane-bound complex coupling the FixI cation pump with a redox process catalyzed by FixG [H]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=815, Percent_Identity=27.9754601226994, Blast_Score=250, Evalue=3e-66, Organism=Homo sapiens, GI115529486, Length=861, Percent_Identity=26.3646922183508, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI55743073, Length=536, Percent_Identity=30.5970149253731, Blast_Score=183, Evalue=7e-46, Organism=Homo sapiens, GI48762687, Length=260, Percent_Identity=24.6153846153846, Blast_Score=67, Evalue=9e-11, Organism=Homo sapiens, GI48762691, Length=267, Percent_Identity=25.0936329588015, Blast_Score=67, Evalue=1e-10, Organism=Escherichia coli, GI1786691, Length=761, Percent_Identity=31.5374507227332, Blast_Score=276, Evalue=3e-75, Organism=Escherichia coli, GI1789879, Length=726, Percent_Identity=29.7520661157025, Blast_Score=217, Evalue=2e-57, Organism=Escherichia coli, GI1786914, Length=515, Percent_Identity=28.1553398058252, Blast_Score=107, Evalue=3e-24, Organism=Escherichia coli, GI2367363, Length=151, Percent_Identity=32.4503311258278, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17556548, Length=675, Percent_Identity=26.6666666666667, Blast_Score=179, Evalue=4e-45, Organism=Saccharomyces cerevisiae, GI6319772, Length=617, Percent_Identity=28.6871961102107, Blast_Score=219, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6320475, Length=620, Percent_Identity=26.1290322580645, Blast_Score=191, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6325221, Length=258, Percent_Identity=26.7441860465116, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6321430, Length=254, Percent_Identity=25.9842519685039, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI221329854, Length=506, Percent_Identity=28.2608695652174, Blast_Score=166, Evalue=4e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR006403 - InterPro: IPR000695 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000150 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00702 Hydrolase [H]
EC number: 3.6.3.4 [C]
Molecular weight: Translated: 84738; Mature: 84738
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: PS00154 ATPASE_E1_E2 ; PS50846 HMA_2 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGLSETRPADSADGGTACRHCGLPVPANGPAGAEFCCVGCRGAYGLIRDSGLDQYYQRR CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCHHHHHHHH CLDPDTPPPRPEDLGPIDFSAHILRQPTADGGEEAVLHLMVEGIHCAACVWLIETLLGRQ CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PGVSQARLNMTTRRLTLRFRPAKGETAADLGANTLLAPVARVGYRLVPYDPALLDQETRR CCCCHHHHHEEEEEEEEEEECCCCCCHHHCCCHHHHHHHHHHCCEECCCCHHHCCHHHHH TEKALVQAMAVAGFASANVMLLSVSVWAGVDMGPRTRDLMHWISALIAVPAVIYAVRPFA HHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HSAFAALRAGRASMDMPITLAVTLATGVSLWETANGGAHAYFDAAVTLLFFLLIGRFLDH HHHHHHHHCCCCCCCCCEEEEEEHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH RARGRARSTAEHLLALGATAVTVLRDDGTLEHRPPRQVTPGATVLVATGERIGVDGTVSQ HHCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCEEEEECCCEECCCCCHHC GCSDVDTSLLTGETLPEPVHPGSAVFAGTLNLTGPLRLSAGAVGEGTLLAEIVRMMEVAE CCCHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHH QGRARYVAIADRVARAYVPVVHALALASFLGWLTLMGAPWQQALMVAAAVLIVTCPCALA HCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LAVPVVQVVATGRLLRQGILVKSPTALERLTGVDHVVFDKTGTLTLGRPDLRPADPARAD HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEECCCCEEEECCCCCCCCCCCCCC AWSAEDLAAAAQLAAASHHPLARALALAAPEAKPAALAREWPGQGMSLPLAEGEARLGRA CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHCCCE VFCGLEDTPAEDGGGPELWFTRPGHAPVRFGFIDRPRPDAAEVVAALRAQGIGVELLSGD EEECCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCC RPAVAAALAARIGLNDWRAGCSPADKVARLAELAAAGKTVLMVGDGLNDAPALAAAHVSL CHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHEEEEEC SPASAVDVTQTAADVVFQGERLTPVIEALGVARRADRLVRQNFVLSFAYNIVTVPLAICG CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVTPLIAAVAMSSSSVVVILNALRLSRRR HHHHHHHHHHCCCCCCEEHHHHHHHHCCC >Mature Secondary Structure MDGLSETRPADSADGGTACRHCGLPVPANGPAGAEFCCVGCRGAYGLIRDSGLDQYYQRR CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCHHHHHHHH CLDPDTPPPRPEDLGPIDFSAHILRQPTADGGEEAVLHLMVEGIHCAACVWLIETLLGRQ CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PGVSQARLNMTTRRLTLRFRPAKGETAADLGANTLLAPVARVGYRLVPYDPALLDQETRR CCCCHHHHHEEEEEEEEEEECCCCCCHHHCCCHHHHHHHHHHCCEECCCCHHHCCHHHHH TEKALVQAMAVAGFASANVMLLSVSVWAGVDMGPRTRDLMHWISALIAVPAVIYAVRPFA HHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HSAFAALRAGRASMDMPITLAVTLATGVSLWETANGGAHAYFDAAVTLLFFLLIGRFLDH HHHHHHHHCCCCCCCCCEEEEEEHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH RARGRARSTAEHLLALGATAVTVLRDDGTLEHRPPRQVTPGATVLVATGERIGVDGTVSQ HHCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCEEEEECCCEECCCCCHHC GCSDVDTSLLTGETLPEPVHPGSAVFAGTLNLTGPLRLSAGAVGEGTLLAEIVRMMEVAE CCCHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHH QGRARYVAIADRVARAYVPVVHALALASFLGWLTLMGAPWQQALMVAAAVLIVTCPCALA HCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LAVPVVQVVATGRLLRQGILVKSPTALERLTGVDHVVFDKTGTLTLGRPDLRPADPARAD HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEECCCCEEEECCCCCCCCCCCCCC AWSAEDLAAAAQLAAASHHPLARALALAAPEAKPAALAREWPGQGMSLPLAEGEARLGRA CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHCCCE VFCGLEDTPAEDGGGPELWFTRPGHAPVRFGFIDRPRPDAAEVVAALRAQGIGVELLSGD EEECCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCC RPAVAAALAARIGLNDWRAGCSPADKVARLAELAAAGKTVLMVGDGLNDAPALAAAHVSL CHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHEEEEEC SPASAVDVTQTAADVVFQGERLTPVIEALGVARRADRLVRQNFVLSFAYNIVTVPLAICG CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVTPLIAAVAMSSSSVVVILNALRLSRRR HHHHHHHHHHCCCCCCEEHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Cu [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O [C]
Specific reaction: ATP + H2O = ADP + Orthophosphate. [C]
General reaction: Phosphorous acid anhydride hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2536685; 11481432 [H]