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The map label for this gene is kaiB [H]

Identifier: 83594624

GI number: 83594624

Start: 3790103

End: 3790411

Strand: Direct

Name: kaiB [H]

Synonym: Rru_A3294

Alternate gene names: 83594624

Gene position: 3790103-3790411 (Clockwise)

Preceding gene: 83594623

Following gene: 83594625

Centisome position: 87.07

GC content: 64.72

Gene sequence:

>309_bases
ATGGGTCCAACCGTTCACCTCACGCTTTATATCTGCGGCGAAACCCTGCGTTCGCGCAACGCCCTGCGGGCGATCGACCG
CATCCGCCACGCCTACGGCCCCCATTGCGCCATCAAGGTGGTCGATGTGATCGACAGTCCCGCCGAAGCCGAGGAGCAGC
GGATCCTTGCCACGCCGACCCTTGTGCGCGACCTGCCCCCTCCGCGACGACGGGTCGTTGGTGATCTGATCGATGTGGAC
CAGGTGTGCCGCATCCTTGATCTCCCCCTCCCGCCGTCGTGCCTCGAGAACGCGGACATAACGCCATGA

Upstream 100 bases:

>100_bases
CCGGTTGATCGCTTTGCAATTGATGGGACATTTGGTCACGCATTACAGACTGCGGGTGATTGGAGCGCCGGGGCGCACGC
TGGGCCGGGGGAGACGTTGA

Downstream 100 bases:

>100_bases
CCCTTCCCCTGCTGACAGAAGTCGAGAAGCTTCCCACGGGAATTCCCGGGTTCGACCTGATCGCCCATGGTGGACTGCCG
GCCGGTCGAACAACGTTGAT

Product: KaiB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MGPTVHLTLYICGETLRSRNALRAIDRIRHAYGPHCAIKVVDVIDSPAEAEEQRILATPTLVRDLPPPRRRVVGDLIDVD
QVCRILDLPLPPSCLENADITP

Sequences:

>Translated_102_residues
MGPTVHLTLYICGETLRSRNALRAIDRIRHAYGPHCAIKVVDVIDSPAEAEEQRILATPTLVRDLPPPRRRVVGDLIDVD
QVCRILDLPLPPSCLENADITP
>Mature_101_residues
GPTVHLTLYICGETLRSRNALRAIDRIRHAYGPHCAIKVVDVIDSPAEAEEQRILATPTLVRDLPPPRRRVVGDLIDVDQ
VCRILDLPLPPSCLENADITP

Specific function: Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-non-specific transcription regulator that represses transcription, possibly by acting on the state of

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kaiB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013474
- InterPro:   IPR011649
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF07689 KaiB [H]

EC number: NA

Molecular weight: Translated: 11313; Mature: 11182

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPTVHLTLYICGETLRSRNALRAIDRIRHAYGPHCAIKVVDVIDSPAEAEEQRILATPT
CCCEEEEEEEEECHHHHCCHHHHHHHHHHHHCCCCCEEEHHHHHCCCCCCHHCEECCCCH
LVRDLPPPRRRVVGDLIDVDQVCRILDLPLPPSCLENADITP
HHHCCCCCHHHHHHHHCCHHHHHHHHCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
GPTVHLTLYICGETLRSRNALRAIDRIRHAYGPHCAIKVVDVIDSPAEAEEQRILATPT
CCEEEEEEEEECHHHHCCHHHHHHHHHHHHCCCCCEEEHHHHHCCCCCCHHCEECCCCH
LVRDLPPPRRRVVGDLIDVDQVCRILDLPLPPSCLENADITP
HHHCCCCCHHHHHHHHCCHHHHHHHHCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA