| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594610
Identifier: 83594610
GI number: 83594610
Start: 3777915
End: 3778415
Strand: Direct
Name: 83594610
Synonym: Rru_A3280
Alternate gene names: NA
Gene position: 3777915-3778415 (Clockwise)
Preceding gene: 83594609
Following gene: 83594611
Centisome position: 86.79
GC content: 63.07
Gene sequence:
>501_bases ATGACGACAATCACCGCCTTGACCGAAGAGGCGACCCCCAATCCCATCGACCTGATCGAGTCCATCGCCGTCTTCAAGGA ATGGACCTTCGAGCGCCGTGGCGACCGGGAGATGGCCGTGGAGGTTCCCGGGCATTGGTGCGACTACGGGCTGTTCTTCT CGTGGTCGGAAGATCTCGACGCCTTGCACTTTTCCTGCGCCTTCGACATGCGCGTTCCCAAGAACCGCCGCGGCGAGATC CTTGACCTGCTCGCCCAGTTGAACGAGCGGCTGTGGCTTGGCCATTTCGCCCTGTGGAGCGAGACCGGGATCCCGATGTT CCGCCAGACCGTCTTGCTGTCGGGCCAGGAGTTGAACCGGGCCGGGCTGGAAGATCTGGTCGAGATCGCCGTGACCGAAT GCGAGCGCTTCTATCCCGCCTTCCAGTTCGCCATCTGGGGCGGCAAAAGCGCGCGGGAGGCCGTGGAGGCCGCCCTTTTG GAAACCGCTGGAGAAGCTTGA
Upstream 100 bases:
>100_bases GATCCCATCGTCGACAGCCCGTGATCGGGCGTCGGCCCGCTCGTTCCCCGGCGCCGCTCGCGGTCCCGGATAGGCCCCCC ACCGTTACGGAGAAGAGGGC
Downstream 100 bases:
>100_bases GATGGGTTGCCTGACCACCGATACCCCGCTTGCGGGGGTTTCGTTGTTGCTGCTGGGCTGCGGGAAGATGGGCGGCGCCC TGCTGAACGGCTGGCTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTTITALTEEATPNPIDLIESIAVFKEWTFERRGDREMAVEVPGHWCDYGLFFSWSEDLDALHFSCAFDMRVPKNRRGEI LDLLAQLNERLWLGHFALWSETGIPMFRQTVLLSGQELNRAGLEDLVEIAVTECERFYPAFQFAIWGGKSAREAVEAALL ETAGEA
Sequences:
>Translated_166_residues MTTITALTEEATPNPIDLIESIAVFKEWTFERRGDREMAVEVPGHWCDYGLFFSWSEDLDALHFSCAFDMRVPKNRRGEI LDLLAQLNERLWLGHFALWSETGIPMFRQTVLLSGQELNRAGLEDLVEIAVTECERFYPAFQFAIWGGKSAREAVEAALL ETAGEA >Mature_165_residues TTITALTEEATPNPIDLIESIAVFKEWTFERRGDREMAVEVPGHWCDYGLFFSWSEDLDALHFSCAFDMRVPKNRRGEIL DLLAQLNERLWLGHFALWSETGIPMFRQTVLLSGQELNRAGLEDLVEIAVTECERFYPAFQFAIWGGKSAREAVEAALLE TAGEA
Specific function: Unknown
COG id: COG5465
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18860; Mature: 18728
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTITALTEEATPNPIDLIESIAVFKEWTFERRGDREMAVEVPGHWCDYGLFFSWSEDLD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEECCCEEEECCCCCH ALHFSCAFDMRVPKNRRGEILDLLAQLNERLWLGHFALWSETGIPMFRQTVLLSGQELNR HEEHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCH AGLEDLVEIAVTECERFYPAFQFAIWGGKSAREAVEAALLETAGEA HHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTITALTEEATPNPIDLIESIAVFKEWTFERRGDREMAVEVPGHWCDYGLFFSWSEDLD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEECCCEEEECCCCCH ALHFSCAFDMRVPKNRRGEILDLLAQLNERLWLGHFALWSETGIPMFRQTVLLSGQELNR HEEHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCH AGLEDLVEIAVTECERFYPAFQFAIWGGKSAREAVEAALLETAGEA HHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA