Click here to switch to the map view.

The map label for this gene is yibF [H]

Identifier: 83594601

GI number: 83594601

Start: 3769361

End: 3769999

Strand: Direct

Name: yibF [H]

Synonym: Rru_A3271

Alternate gene names: 83594601

Gene position: 3769361-3769999 (Clockwise)

Preceding gene: 83594600

Following gene: 83594609

Centisome position: 86.6

GC content: 67.76

Gene sequence:

>639_bases
ATGACCGACGCCCCCCGCTTCCGCCTGCGCCATTCGCCGACCTCGCCCTTCGTGCGCAAGGTTCTCGCCTTCGCCATCGA
AACCGGCCTGCGCGATCGCATCGATCTGGTTGCGACCGACCCCTGGGACGCCGCCACCGATCTGCGCGACGACAACCCCT
TGTGCAAGGTTCCCACCCTGATCCGCCCCGATGGCTCGTCCCTGGGCGAAAGCAGCCTGATCTGCGCCTATCTCGATGAC
CTCCACGACGGGGAAAAGCTGTTCCCGACCGAGGACGGGGCGCGCTTCGCCGCCCTGCGCCAGTTGGGGCTGGCCGATGG
CCTGATCACCGCCGCCGTTAATCTAGTCATCGAGGGCCGCCGCGCCGAAGGGACCCGCGACGATAAATGGATCGACCGCC
AGAAGCTGGCGATCCGCTCCACCCTTGATGTCTTGGAAAGCGAAGCCGGCCCCTTGACCGGCGCTCCGGTGACGATCGGC
GCCGTTTCGCTGGGCGCGGCACTCGGCTATCTCGATTTCCGCTTCCCCGACATCTTCTGGCGCGACCGCCATCCCGCCCT
GGCCGGCTGGTTCGAGGATTTTTCCCGCCGCCCGTCGATGGAAGCCACCCGCCCGCCGGCACCCCAGCCCAAGGCCTGA

Upstream 100 bases:

>100_bases
GCGCCGATTCGGCCGATTTCCAAGAGGCCTTTGGCATGACCGGCGCCGATCCGGTCGAGGTTTTCGCCCGTACCCGTCTC
AAGAAGGATCATTTCTGACC

Downstream 100 bases:

>100_bases
GGCGATAGGAAGGGGGGGGCGCCCGCCGACGGGTTCGCCCCTCCCGCCCCCGGTTGGCAGGGGAGGACGCCCCTATAATC
CCAGACGCTCCCGCCAGACG

Product: glutathione S-transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MTDAPRFRLRHSPTSPFVRKVLAFAIETGLRDRIDLVATDPWDAATDLRDDNPLCKVPTLIRPDGSSLGESSLICAYLDD
LHDGEKLFPTEDGARFAALRQLGLADGLITAAVNLVIEGRRAEGTRDDKWIDRQKLAIRSTLDVLESEAGPLTGAPVTIG
AVSLGAALGYLDFRFPDIFWRDRHPALAGWFEDFSRRPSMEATRPPAPQPKA

Sequences:

>Translated_212_residues
MTDAPRFRLRHSPTSPFVRKVLAFAIETGLRDRIDLVATDPWDAATDLRDDNPLCKVPTLIRPDGSSLGESSLICAYLDD
LHDGEKLFPTEDGARFAALRQLGLADGLITAAVNLVIEGRRAEGTRDDKWIDRQKLAIRSTLDVLESEAGPLTGAPVTIG
AVSLGAALGYLDFRFPDIFWRDRHPALAGWFEDFSRRPSMEATRPPAPQPKA
>Mature_211_residues
TDAPRFRLRHSPTSPFVRKVLAFAIETGLRDRIDLVATDPWDAATDLRDDNPLCKVPTLIRPDGSSLGESSLICAYLDDL
HDGEKLFPTEDGARFAALRQLGLADGLITAAVNLVIEGRRAEGTRDDKWIDRQKLAIRSTLDVLESEAGPLTGAPVTIGA
VSLGAALGYLDFRFPDIFWRDRHPALAGWFEDFSRRPSMEATRPPAPQPKA

Specific function: Unknown

COG id: COG0625

COG function: function code O; Glutathione S-transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1790018, Length=202, Percent_Identity=29.2079207920792, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: NA

Molecular weight: Translated: 23335; Mature: 23203

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAPRFRLRHSPTSPFVRKVLAFAIETGLRDRIDLVATDPWDAATDLRDDNPLCKVPTL
CCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEE
IRPDGSSLGESSLICAYLDDLHDGEKLFPTEDGARFAALRQLGLADGLITAAVNLVIEGR
ECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECC
RAEGTRDDKWIDRQKLAIRSTLDVLESEAGPLTGAPVTIGAVSLGAALGYLDFRFPDIFW
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCEE
RDRHPALAGWFEDFSRRPSMEATRPPAPQPKA
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDAPRFRLRHSPTSPFVRKVLAFAIETGLRDRIDLVATDPWDAATDLRDDNPLCKVPTL
CCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEE
IRPDGSSLGESSLICAYLDDLHDGEKLFPTEDGARFAALRQLGLADGLITAAVNLVIEGR
ECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECC
RAEGTRDDKWIDRQKLAIRSTLDVLESEAGPLTGAPVTIGAVSLGAALGYLDFRFPDIFW
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCEE
RDRHPALAGWFEDFSRRPSMEATRPPAPQPKA
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]