| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83594542
Identifier: 83594542
GI number: 83594542
Start: 3702360
End: 3703130
Strand: Reverse
Name: 83594542
Synonym: Rru_A3212
Alternate gene names: NA
Gene position: 3703130-3702360 (Counterclockwise)
Preceding gene: 83594544
Following gene: 83594541
Centisome position: 85.07
GC content: 61.22
Gene sequence:
>771_bases ATGCCGCATCGCGATAAGACGAAGCTGTTTACTGCCGAGCGTCAGATGCGGCGCTCCGGTGGCGGGGGAAAGGACGAGGG CGGCGGGCTCGCCGAGATCCTCGAGACGCTTCAGGCGCTTCGCGGTGAGGTCCGCGATCTTGATCGCAAGGTGGTCGGGT TGCAGGTGGCGGCGGGTGCGGCTGCCCTCCCGATGCTTCCCCCCGAGGAAACCCCGACGGCGGCGGTCGCGCGCAAGAAG GAGGAGCGGACCGAGGTTCGCATCCTCAAGATTGAGCTGAATTCCCTTGCCCATAGCATCGAAACGACGAAAAAAGAGAT CGCCTTGCTGCGGGCACAGGGCGATGAGGGCGATCGTCTGACCACGGTGGCCAATGAACTTGACGCCGTGGTTTCCGCCA CCGAGAGCGCCACCGAGACGATCCTTGATACGATCGAAAAGATCGCCACCACGGCGGCGCAGATCCAGGCCCAGGAGCAA GACAGTTTCATCCGCCAGTTGGCCGACGAAATTCAAGAGATGACCGTCTCGGTGTTCGAAGCCTGTAATTTCCAGGATCT GACCGGCCAGCGTATCACCAAGGTGGTCAACACCATGAAATTCGTCGAAGAACGAGTCGACAAGATGATGGCGATCTGGG GCCGGGAAAGCTTCCGCGATCTGGAAGAGGATCCGCCGATGATCGCCGCTGGCGACAACCGCCTTCTCAATGGGCCCCAG GACGTTGGCAAGGGGATCAGTCAGGACGAGATCGACCGGCTGTTTGGCTGA
Upstream 100 bases:
>100_bases CCAACCAAGGATGGGTATACCCAAGCGAATAGGTTGACCTAGCTCTGCCGCCGACAGAAGATGATTTCCGCCGGGATCAA GTCATAGGATTACATTAGAA
Downstream 100 bases:
>100_bases TCACCGGGCTTTTCCGCCGCTCGCCGGTTTGGTGTCTCCCTTTTCCTTCGGGGTGATCTCATGGAAAAATCCACCTCCCC CGCCGTCGATGGCCGCTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Chemotaxis Protein; Chemotaxis Protein CheZ; Methyl-Accepting Chemotaxis Protein; Chemotaxis Phosphatase Chez; Chemotaxis Phosphatase Protein CheZ
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MPHRDKTKLFTAERQMRRSGGGGKDEGGGLAEILETLQALRGEVRDLDRKVVGLQVAAGAAALPMLPPEETPTAAVARKK EERTEVRILKIELNSLAHSIETTKKEIALLRAQGDEGDRLTTVANELDAVVSATESATETILDTIEKIATTAAQIQAQEQ DSFIRQLADEIQEMTVSVFEACNFQDLTGQRITKVVNTMKFVEERVDKMMAIWGRESFRDLEEDPPMIAAGDNRLLNGPQ DVGKGISQDEIDRLFG
Sequences:
>Translated_256_residues MPHRDKTKLFTAERQMRRSGGGGKDEGGGLAEILETLQALRGEVRDLDRKVVGLQVAAGAAALPMLPPEETPTAAVARKK EERTEVRILKIELNSLAHSIETTKKEIALLRAQGDEGDRLTTVANELDAVVSATESATETILDTIEKIATTAAQIQAQEQ DSFIRQLADEIQEMTVSVFEACNFQDLTGQRITKVVNTMKFVEERVDKMMAIWGRESFRDLEEDPPMIAAGDNRLLNGPQ DVGKGISQDEIDRLFG >Mature_255_residues PHRDKTKLFTAERQMRRSGGGGKDEGGGLAEILETLQALRGEVRDLDRKVVGLQVAAGAAALPMLPPEETPTAAVARKKE ERTEVRILKIELNSLAHSIETTKKEIALLRAQGDEGDRLTTVANELDAVVSATESATETILDTIEKIATTAAQIQAQEQD SFIRQLADEIQEMTVSVFEACNFQDLTGQRITKVVNTMKFVEERVDKMMAIWGRESFRDLEEDPPMIAAGDNRLLNGPQD VGKGISQDEIDRLFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28174; Mature: 28043
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHRDKTKLFTAERQMRRSGGGGKDEGGGLAEILETLQALRGEVRDLDRKVVGLQVAAGA CCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AALPMLPPEETPTAAVARKKEERTEVRILKIELNSLAHSIETTKKEIALLRAQGDEGDRL HHCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHH TTVANELDAVVSATESATETILDTIEKIATTAAQIQAQEQDSFIRQLADEIQEMTVSVFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ACNFQDLTGQRITKVVNTMKFVEERVDKMMAIWGRESFRDLEEDPPMIAAGDNRLLNGPQ HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHH DVGKGISQDEIDRLFG HHCCCCCHHHHHHHCC >Mature Secondary Structure PHRDKTKLFTAERQMRRSGGGGKDEGGGLAEILETLQALRGEVRDLDRKVVGLQVAAGA CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AALPMLPPEETPTAAVARKKEERTEVRILKIELNSLAHSIETTKKEIALLRAQGDEGDRL HHCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHH TTVANELDAVVSATESATETILDTIEKIATTAAQIQAQEQDSFIRQLADEIQEMTVSVFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ACNFQDLTGQRITKVVNTMKFVEERVDKMMAIWGRESFRDLEEDPPMIAAGDNRLLNGPQ HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHH DVGKGISQDEIDRLFG HHCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA