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The map label for this gene is ctpA [H]

Identifier: 83594534

GI number: 83594534

Start: 3695033

End: 3696733

Strand: Direct

Name: ctpA [H]

Synonym: Rru_A3204

Alternate gene names: 83594534

Gene position: 3695033-3696733 (Clockwise)

Preceding gene: 83594533

Following gene: 83594535

Centisome position: 84.89

GC content: 67.78

Gene sequence:

>1701_bases
ATGGAAAGTCGAACGGGCATGGGTGCGGTTTTAACCGAGGCGCCGAGGCGGACATCGACGCGACGTGTGGTTCTTACCCT
GTTGGCCGGCTTGACCGGCTGCGCCCATCCCGCACCGCTGGCGTCCACCGCCCTTCCGCAGGCGACAGCGGTTTCGCACA
GTGGCAAAATCCCGCCGACCGCCGTTTGGACGGTGCCCTCCGCCTTCGACAAGGGGCTGCGCGGCGAGACCGAGGACTTG
TTCTCCTATGGCTACGGCGCCATTGCCGACCGCTATATCGACGAAGTGAACCTGCGGGAACTGGGCGTCGAGGGCTTGAG
CGGCCTGACCAGCCTTGATCCGGCGATCACCGTCGCCCCGGTGGGGGCGATGCTCGATGTCTATCGGAACGGCACGGTCG
TCGGCCGCTTTCCGCTGGCCGGGGCCCGCGACTCGGCGGGTTGGGGCGTCTTGACCGCCAATGTGGTGATGCTGGCGCGC
GATTTGTCGCCAAGCCTGAACGCCAGCGATCCCGAAGAGATCTATCAGGCGATCTTCACCTCGGCGCTCGGCGGCCTTGA
TCCCTTTTCACGCTACGCCAGCCGCGACGATGCCGAGGTCAACCGCGGCCAACGCAACGGCTTTGGCGGCATCGGCGTCA
TGTACGACGTGGGTGGACGCGGCGCGACCATCACCCAGGTCATGCCCGGCACCCCGGCCGCCGATGCCCGCTTGCGCCTG
GGCGACGTCATCGTCGCGGTGAATGGTCAGAGCACCCGGGGGGCCACACGCCACGATCTGCGCGAATGGCTGCGCGGACC
GACCAGCAGCGAGGTCACCTTGACCCTTGTCAGCGCCGACACGCCGACCGAACGCACGCTGACCCTGACCCGCGCCCTGA
TCATCATGCCCACCGTCGACCTCCATCTCGACGAAGGCGTCGGTTTCATCACCGTCTCAAGCTTCAACCAGGGCACGACG
ACGCGGGTCGCCGAAGCCATCGGCGAGGCCCGCCGACAGTTGGGCGCCGATCTGCGCGGGCTGGTCATCGATCTGCGCGG
CAATCCCGGCGGCCTGCTTGATCAGGCGGTGACGATGAGCGACCTGTTCCTTGACACCGGCCCCATCGTCTCGACTCGCG
GCCGCAATCCCGACGCCCGACAGTTCTATGCCTCGAGCGGCGGCGATATCGCCCAGAATTTGCCGATCGTCGCCCTGATC
GACGGCGACAGCGCCTCGGCCGCCGAAATCGTCGCCGCCGCCTTGCAAGACAACGGCCGGGCGGTGGTGATCGGCACCTC
GTCGTTTGGCAAAGGCACGGTGCAAACCCTGATCCAATTGCCCAATGGCGGCGAATTGACCCTGACGTGGTCGCGCTTCC
ACAGCCCCTCGGGCTATGTCCTTCATGGCCTGGGCGTGCTGCCGGTCGCCTGCACCAGCGGCATCGCCGAGGCCAGCCGC
GAGGATGGCGCGCCGGCCGACAAGGTGCTGACCACCATGCGCCGCGACCAGTCGGAAATCGCCGCGCATGTCGCCTTGTG
GCGCCAAACCGACATGCGCGACGCCAGCCGCCGTCTGGCGCTGCGCGACGCCTGCCCGGCCGAACACCACCCGCGCGCCC
TGATCGACGAAACGGTAGCCCGCAAGCTGATCGCCGACCAGGGGCTTTATGGCCGCGCCCTGCGCCTGACCGCCCCGGCC
CAATCGGCCAGCGGACTGTGA

Upstream 100 bases:

>100_bases
AGGAATATTTCCGAAAAAGCCCATAGACAGGGGAGCGCATCTTGCCTAACCCTGAAGGCAGGATGACAGCGTCGATCGCG
GCGAAGAGATCCTCCCCTTA

Downstream 100 bases:

>100_bases
GCGCGGGTTTTCGCTGTGATATGAGTCGCCTAAACGCTTGACATCGCCGCCGCGGTGGCTATTCTCCGCCGCTCAAATCG
TCATTGCTCTTTTTAGGAAC

Product: C-terminal processing peptidase

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MESRTGMGAVLTEAPRRTSTRRVVLTLLAGLTGCAHPAPLASTALPQATAVSHSGKIPPTAVWTVPSAFDKGLRGETEDL
FSYGYGAIADRYIDEVNLRELGVEGLSGLTSLDPAITVAPVGAMLDVYRNGTVVGRFPLAGARDSAGWGVLTANVVMLAR
DLSPSLNASDPEEIYQAIFTSALGGLDPFSRYASRDDAEVNRGQRNGFGGIGVMYDVGGRGATITQVMPGTPAADARLRL
GDVIVAVNGQSTRGATRHDLREWLRGPTSSEVTLTLVSADTPTERTLTLTRALIIMPTVDLHLDEGVGFITVSSFNQGTT
TRVAEAIGEARRQLGADLRGLVIDLRGNPGGLLDQAVTMSDLFLDTGPIVSTRGRNPDARQFYASSGGDIAQNLPIVALI
DGDSASAAEIVAAALQDNGRAVVIGTSSFGKGTVQTLIQLPNGGELTLTWSRFHSPSGYVLHGLGVLPVACTSGIAEASR
EDGAPADKVLTTMRRDQSEIAAHVALWRQTDMRDASRRLALRDACPAEHHPRALIDETVARKLIADQGLYGRALRLTAPA
QSASGL

Sequences:

>Translated_566_residues
MESRTGMGAVLTEAPRRTSTRRVVLTLLAGLTGCAHPAPLASTALPQATAVSHSGKIPPTAVWTVPSAFDKGLRGETEDL
FSYGYGAIADRYIDEVNLRELGVEGLSGLTSLDPAITVAPVGAMLDVYRNGTVVGRFPLAGARDSAGWGVLTANVVMLAR
DLSPSLNASDPEEIYQAIFTSALGGLDPFSRYASRDDAEVNRGQRNGFGGIGVMYDVGGRGATITQVMPGTPAADARLRL
GDVIVAVNGQSTRGATRHDLREWLRGPTSSEVTLTLVSADTPTERTLTLTRALIIMPTVDLHLDEGVGFITVSSFNQGTT
TRVAEAIGEARRQLGADLRGLVIDLRGNPGGLLDQAVTMSDLFLDTGPIVSTRGRNPDARQFYASSGGDIAQNLPIVALI
DGDSASAAEIVAAALQDNGRAVVIGTSSFGKGTVQTLIQLPNGGELTLTWSRFHSPSGYVLHGLGVLPVACTSGIAEASR
EDGAPADKVLTTMRRDQSEIAAHVALWRQTDMRDASRRLALRDACPAEHHPRALIDETVARKLIADQGLYGRALRLTAPA
QSASGL
>Mature_566_residues
MESRTGMGAVLTEAPRRTSTRRVVLTLLAGLTGCAHPAPLASTALPQATAVSHSGKIPPTAVWTVPSAFDKGLRGETEDL
FSYGYGAIADRYIDEVNLRELGVEGLSGLTSLDPAITVAPVGAMLDVYRNGTVVGRFPLAGARDSAGWGVLTANVVMLAR
DLSPSLNASDPEEIYQAIFTSALGGLDPFSRYASRDDAEVNRGQRNGFGGIGVMYDVGGRGATITQVMPGTPAADARLRL
GDVIVAVNGQSTRGATRHDLREWLRGPTSSEVTLTLVSADTPTERTLTLTRALIIMPTVDLHLDEGVGFITVSSFNQGTT
TRVAEAIGEARRQLGADLRGLVIDLRGNPGGLLDQAVTMSDLFLDTGPIVSTRGRNPDARQFYASSGGDIAQNLPIVALI
DGDSASAAEIVAAALQDNGRAVVIGTSSFGKGTVQTLIQLPNGGELTLTWSRFHSPSGYVLHGLGVLPVACTSGIAEASR
EDGAPADKVLTTMRRDQSEIAAHVALWRQTDMRDASRRLALRDACPAEHHPRALIDETVARKLIADQGLYGRALRLTAPA
QSASGL

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=330, Percent_Identity=31.8181818181818, Blast_Score=129, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 59519; Mature: 59519

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESRTGMGAVLTEAPRRTSTRRVVLTLLAGLTGCAHPAPLASTALPQATAVSHSGKIPPT
CCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHCCCCCCCCC
AVWTVPSAFDKGLRGETEDLFSYGYGAIADRYIDEVNLRELGVEGLSGLTSLDPAITVAP
EEEECCHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCCHHHHCCHHHCCCCCCCCCEEEHH
VGAMLDVYRNGTVVGRFPLAGARDSAGWGVLTANVVMLARDLSPSLNASDPEEIYQAIFT
HHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
SALGGLDPFSRYASRDDAEVNRGQRNGFGGIGVMYDVGGRGATITQVMPGTPAADARLRL
HHHCCCCHHHHHCCCCCHHHCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCEEEE
GDVIVAVNGQSTRGATRHDLREWLRGPTSSEVTLTLVSADTPTERTLTLTRALIIMPTVD
CEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHEEEEEEEEEEEE
LHLDEGVGFITVSSFNQGTTTRVAEAIGEARRQLGADLRGLVIDLRGNPGGLLDQAVTMS
EEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHH
DLFLDTGPIVSTRGRNPDARQFYASSGGDIAQNLPIVALIDGDSASAAEIVAAALQDNGR
HHHCCCCCEEECCCCCCCHHHHCCCCCCCHHHCCCEEEEECCCCCCHHHHHHHHHCCCCC
AVVIGTSSFGKGTVQTLIQLPNGGELTLTWSRFHSPSGYVLHGLGVLPVACTSGIAEASR
EEEEECCCCCCHHHHHHHCCCCCCEEEEEEHHCCCCCCEEEECCCHHHHHHHHHHHHHHH
EDGAPADKVLTTMRRDQSEIAAHVALWRQTDMRDASRRLALRDACPAEHHPRALIDETVA
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
RKLIADQGLYGRALRLTAPAQSASGL
HHHHHCCCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MESRTGMGAVLTEAPRRTSTRRVVLTLLAGLTGCAHPAPLASTALPQATAVSHSGKIPPT
CCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHCCCCCCCCC
AVWTVPSAFDKGLRGETEDLFSYGYGAIADRYIDEVNLRELGVEGLSGLTSLDPAITVAP
EEEECCHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCCHHHHCCHHHCCCCCCCCCEEEHH
VGAMLDVYRNGTVVGRFPLAGARDSAGWGVLTANVVMLARDLSPSLNASDPEEIYQAIFT
HHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
SALGGLDPFSRYASRDDAEVNRGQRNGFGGIGVMYDVGGRGATITQVMPGTPAADARLRL
HHHCCCCHHHHHCCCCCHHHCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCEEEE
GDVIVAVNGQSTRGATRHDLREWLRGPTSSEVTLTLVSADTPTERTLTLTRALIIMPTVD
CEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHEEEEEEEEEEEE
LHLDEGVGFITVSSFNQGTTTRVAEAIGEARRQLGADLRGLVIDLRGNPGGLLDQAVTMS
EEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHH
DLFLDTGPIVSTRGRNPDARQFYASSGGDIAQNLPIVALIDGDSASAAEIVAAALQDNGR
HHHCCCCCEEECCCCCCCHHHHCCCCCCCHHHCCCEEEEECCCCCCHHHHHHHHHCCCCC
AVVIGTSSFGKGTVQTLIQLPNGGELTLTWSRFHSPSGYVLHGLGVLPVACTSGIAEASR
EEEEECCCCCCHHHHHHHCCCCCCEEEEEEHHCCCCCCEEEECCCHHHHHHHHHHHHHHH
EDGAPADKVLTTMRRDQSEIAAHVALWRQTDMRDASRRLALRDACPAEHHPRALIDETVA
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
RKLIADQGLYGRALRLTAPAQSASGL
HHHHHCCCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]